BAC Information

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BAC

Clone NameB6Ng01-141F04
Chromosome15 (Build37)
Map Location 95,956,781 - 96,175,054
singlet/doubletdoublet
Overlap geneLOC100043335, EG667869, LOC667874, LOC667894
Upstream geneLOC100043315, Nell2, Dbx2, LOC100042684, LOC667849, EG629300, LOC667864, Tmem16f, LOC100043329, D030018L15Rik
Downstream geneArid2, Sfrs2ip, Slc38a1, Slc38a2, LOC667941, LOC546651, Slc38a4, Amigo2, BC038822, LOC100043354
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141F04.bB6Ng01-141F04.g
ACCDH939809DH939810
length1,047962
definitionDH939809|Mus musculus domesticus DNA, BAC clone: B6Ng01-141F04, 5' end.DH939810|Mus musculus domesticus DNA, BAC clone: B6Ng01-141F04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(96,173,992 - 96,175,054)(95,956,781 - 95,957,741)
sequence
gaattcaccacttcactctctgacctagacagtgaaagtgaaggatggga
ccacatggggctaagccttgctggggacggagcttgttcaactaaagggc
acaagacagtccgtccacaaacacacacactggcaacaagaacatgaagg
gcgacagccgcttctgcagctctgttctaattactcattccctctttcaa
atctgttccaggtcatcaaataaaagaaacatatttaatattttgaaaat
aattttaacaaataagaagcaaactataaaccacaacaatgctaaataca
aaaaaagtttttttttctcccatgcacataaaatgtaacagattagccac
aggctataaggtcagcacaatctacctagaaaccctcacttttgggttct
ctatcatgcggcgactctcagttgcttttctcttgtcctgatctgtaaac
tgctacaactatttcattgctttaatcatattttgttacacacttacttc
ttttttttttgtaaagatttatttatttatttattataagtaagtacact
gtagctgtcttcagacactccagaagagggtgtcagatcttgttacggat
ggttgtgagccaccatgtggttgctgggatttgaactccggacctttgga
agagcagtcgggtgctcttacccactgagccatctcaccagccccctact
tcttttaaaaaaaaaaaaaaaaaaccatcttataggggccctttccaaat
tcttgaaccccggcaggaggggaaaattaacaagattttcttcaaagcac
aatgtgaaaattccaaaaggctaactttccgttaattagaaataactgac
agtattatggaaaaaagaaaaaagggtagtttggtctaaaatttcgaaaa
cacaacacagaatgggctacaaagctcgaacatgggattgaagtttgttt
ctggacttgagctttcatggaacaagaattaatggaaacgttcatgggca
acaaattgatcagactgcttttgtagacaatgttgtcatgtgtagga
gaattccccaattgctacctgttgtgctcatggtccccccccccctgcgt
tttaattgtttaactggcagagaaaataaatccaatcaagacacactgga
caataaagtaactgaaggaactcccattatctccactaaaggggaagagg
ctagggctggatgtgattgtggacttctactcttacatcacgagcggggt
ggtggctgacccaccaggcagtaaagctgagtgtgcttacaatgcttcac
cctcaaacagaaatgacaagcatgtgatgacgtccctgccatgagcaggt
cccgaggcacacgtggggattatgatgggcccaattgtccataggttcca
ctcccgctactctaagcctacacttgcaacttcatgggacagtcccgatg
agccagcagttgacagggagaagactcagactgggcttatagatggttct
gcttgctagacctgcagaaaactggccaaatgttcggttctctactgatc
catgagctatgcccaatggctccgctgggataagagacatgaaagatgaa
aagagcatgtgggaagttgccaacaaagaatttggggggaaagatgggtg
aactggcctttctgaatgaagaaaaactatgaagatgatagtgtctcgca
tatatactgaaaggtgactttagcagagacgtgaggaattagattaattg
agggtagaatgctctccaccaaaccaaccaacccgtcaacagcccgtgag
ctcatgagtgaattagctatagtgtcaggaaaggagtttatgcatggagt
cagcaacgtgggctttaacttctcaggtcgacaactctattagcagcatg
gggtcctagttaagccagcatcagagactgactgagccattattttgggg
taacataccagttcttagcacaggtagattctattcacgctattatagtt
ctgtggtgggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_96173992_96175054
seq2: B6Ng01-141F04.b_46_1092 (reverse)

seq1  TCCTAACACATGAACCAACAATTGTCTACAAAAGCAGTCTGATCATATTT  50
      |||| ||||||||  |||| ||||||||||||||||||||||||| ||||
seq2  TCCT-ACACATGA--CAAC-ATTGTCTACAAAAGCAGTCTGATCA-ATTT  45

seq1  GTTTGCCCCATGAACCGTCTTCATTAAAATCTTGTGTCAATGGAATGCTC  100
      |||   |||||||| ||| | |||| || |||||| || || ||| ||||
seq2  GTT--GCCCATGAA-CGTTTCCATT-AATTCTTGT-TCCAT-GAAAGCTC  89

seq1  AAAGTCATGTAGACAAACTCAAATCCCAGTGTCTGAGGCTTTGTGGCTCA  150
       |||||  | | |||||||  ||||||| |||  || ||||||| || ||
seq2  -AAGTCCAG-AAACAAACTTCAATCCCA-TGTTCGA-GCTTTGTAGCCCA  135

seq1  TTCTGTGTTGTGTATTCTGAATATTATGACCAAAACTACCC-TTCTTCTC  199
      ||||||||||||| |||  ||| ||| |||| ||||||||| || |||| 
seq2  TTCTGTGTTGTGTTTTCGAAATTTTA-GACC-AAACTACCCTTTTTTCTT  183

seq1  TCTCCAATATAACTGTCAGTTATTTCCTAAATTACAGAAAGTTAGCC-TT  248
      | | | |||  |||||||||||||| |||| | || ||||||||||| ||
seq2  TTTTCCATAATACTGTCAGTTATTT-CTAATTAACGGAAAGTTAGCCTTT  232

seq1  TGTGATTTTCACATTGTGCTTTTGAAG-AAATCTTGTTACTTTTCACCTC  297
      ||  ||||||||||||||| ||||||| ||||||||||| ||||| ||||
seq2  TGGAATTTTCACATTGTGC-TTTGAAGAAAATCTTGTTAATTTTCCCCTC  281

seq1  ATG-CTGGGTTCATAGATTTTGGAAAGTGCCCTAATATGATGATTTTTTT  346
       || | ||||||| ||| ||||||||| ||||  ||| |||| |||||||
seq2  CTGCCGGGGTTCA-AGAATTTGGAAAGGGCCCCTATAAGATGGTTTTTTT  330

seq1  TTTTTTTTTTTAAAAGAAGTAGGGGGCTGGTGAGATGGCTCAGTGGGTAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTAAAAGAAGTAGGGGGCTGGTGAGATGGCTCAGTGGGTAA  380

seq1  GAGCACCCGACTGCTCTTCCAAAGGTCCGGAGTTCAAATCCCAGCAACCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACCCGACTGCTCTTCCAAAGGTCCGGAGTTCAAATCCCAGCAACCA  430

seq1  CATGGTGGCTCACAACCATCCGTAACAAGATCTGACACCCTCTTCTGGAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTGGCTCACAACCATCCGTAACAAGATCTGACACCCTCTTCTGGAG  480

seq1  TGTCTGAAGACAGCTACAGTGTACTTACTTATAATAAATAAATAAATAAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGAAGACAGCTACAGTGTACTTACTTATAATAAATAAATAAATAAA  530

seq1  TCTTTACAAAAAAAAAAGAAGTAAGTGTGTAACAAAATATGATTAAAGCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACAAAAAAAAAAGAAGTAAGTGTGTAACAAAATATGATTAAAGCA  580

seq1  ATGAAATAGTTGTAGCAGTTTACAGATCAGGACAAGAGAAAAGCAACTGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATAGTTGTAGCAGTTTACAGATCAGGACAAGAGAAAAGCAACTGA  630

seq1  GAGTCGCCGCATGATAGAGAACCCAAAAGTGAGGGTTTCTAGGTAGATTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCGCCGCATGATAGAGAACCCAAAAGTGAGGGTTTCTAGGTAGATTG  680

seq1  TGCTGACCTTATAGCCTGTGGCTAATCTGTTACATTTTATGTGCATGGGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGACCTTATAGCCTGTGGCTAATCTGTTACATTTTATGTGCATGGGA  730

seq1  GAAAAAAAAACTTTTTTTGTATTTAGCATTGTTGTGGTTTATAGTTTGCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAACTTTTTTTGTATTTAGCATTGTTGTGGTTTATAGTTTGCT  780

seq1  TCTTATTTGTTAAAATTATTTTCAAAATATTAAATATGTTTCTTTTATTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTTGTTAAAATTATTTTCAAAATATTAAATATGTTTCTTTTATTT  830

seq1  GATGACCTGGAACAGATTTGAAAGAGGGAATGAGTAATTAGAACAGAGCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACCTGGAACAGATTTGAAAGAGGGAATGAGTAATTAGAACAGAGCT  880

seq1  GCAGAAGCGGCTGTCGCCCTTCATGTTCTTGTTGCCAGTGTGTGTGTTTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGCGGCTGTCGCCCTTCATGTTCTTGTTGCCAGTGTGTGTGTTTG  930

seq1  TGGACGGACTGTCTTGTGCCCTTTAGTTGAACAAGCTCCGTCCCCAGCAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACGGACTGTCTTGTGCCCTTTAGTTGAACAAGCTCCGTCCCCAGCAA  980

seq1  GGCTTAGCCCCATGTGGTCCCATCCTTCACTTTCACTGTCTAGGTCAGAG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAGCCCCATGTGGTCCCATCCTTCACTTTCACTGTCTAGGTCAGAG  1030

seq1  AGTGAAGTGGTGAATTC  1063
      |||||||||||||||||
seq2  AGTGAAGTGGTGAATTC  1047

seq1: chr15_95956781_95957741
seq2: B6Ng01-141F04.g_67_1028

seq1  GAATTCCCCAATTGCTACCTGTTGTGCTCATGGTCCCCCCCCCCCTGCGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCAATTGCTACCTGTTGTGCTCATGGTCCCCCCCCCCCTGCGT  50

seq1  TTTAATTGTTTAACTGGCAGAGAAAATAAATCCAATCAAGACACACTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTGTTTAACTGGCAGAGAAAATAAATCCAATCAAGACACACTGGA  100

seq1  CAATAAAGTAACTGAAGGAACTCCCATTATCTCCACTAAAGGGGAAGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAGTAACTGAAGGAACTCCCATTATCTCCACTAAAGGGGAAGAGG  150

seq1  CTAGGGCTGGATGTGATTGTGGACTTCTACTCTTACATCACGAGCGGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGCTGGATGTGATTGTGGACTTCTACTCTTACATCACGAGCGGGGT  200

seq1  GGTGGCTGACCCACCAGGCAGTAAAGCTGAGTGTGCTTACAATGCTTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCTGACCCACCAGGCAGTAAAGCTGAGTGTGCTTACAATGCTTCAC  250

seq1  CCTCAAACAGAAATGACAAGCATGTGATGACGTCCCTGCCATGAGCAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAACAGAAATGACAAGCATGTGATGACGTCCCTGCCATGAGCAGGT  300

seq1  CCCGAGGCACACGTGGGGATTATGATGGGCCCAATTGTCCATAGGTTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAGGCACACGTGGGGATTATGATGGGCCCAATTGTCCATAGGTTCCA  350

seq1  CTCCCGCTACTCTAAGCCTACACTTGCAACTTCATGGGACAGTCCCGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCGCTACTCTAAGCCTACACTTGCAACTTCATGGGACAGTCCCGATG  400

seq1  AGCCAGCAGTTGACAGGGAGAAGACTCAGACTGGGCTTATAGATGGTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCAGTTGACAGGGAGAAGACTCAGACTGGGCTTATAGATGGTTCT  450

seq1  GCTTGCTAGACCTGCAGAAAACTGGCCAAATGTTCGGTTCTCTACTGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTAGACCTGCAGAAAACTGGCCAAATGTTCGGTTCTCTACTGATC  500

seq1  CATGAGCTATGCCCAATGGCTCCGCTGGGATAAGAGACATGAAAGATGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGCTATGCCCAATGGCTCCGCTGGGATAAGAGACATGAAAGATGAA  550

seq1  AAGAGCATGTGGGAAGTTGCCAACAAAGAATTTGGGGGGAAAGATGGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCATGTGGGAAGTTGCCAACAAAGAATTTGGGGGGAAAGATGGGTG  600

seq1  AACTGGCCTTTCTGAATGAAGAAAAACTATGAAGATGATAGTGTCTCGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGCCTTTCTGAATGAAGAAAAACTATGAAGATGATAGTGTCTCGCA  650

seq1  TATATACTGAAAGGTGACTTTAGCAGAGACGTGAGGAATTAGATTAATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACTGAAAGGTGACTTTAGCAGAGACGTGAGGAATTAGATTAATTG  700

seq1  AGGGTAGAATGCTCTCCACCAAACCAACCAACCCGTCAACAGCCCGTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAGAATGCTCTCCACCAAACCAACCAACCCGTCAACAGCCCGTGAG  750

seq1  CTCATGAGTGAATTAGCTATAGTGTCAGGAAAGGAGTTTATGCATGGAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGAGTGAATTAGCTATAGTGTCAGGAAAGGAGTTTATGCATGGAGT  800

seq1  CAGCAACGTGGGCTTTAACTTCCCAGGTCGACAACTCTATTAGCAGCATG  850
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CAGCAACGTGGGCTTTAACTTCTCAGGTCGACAACTCTATTAGCAGCATG  850

seq1  AGGTCCTAGTT-AGCCAGCATCAGAGACTGACTGAGCCATTA-TCTGGGG  898
       |||||||||| |||||||||||||||||||||||||||||| | |||||
seq2  GGGTCCTAGTTAAGCCAGCATCAGAGACTGACTGAGCCATTATTTTGGGG  900

seq1  TAACATACCAGTTCCTAGCAACAGGTAGATTCTA-TCACGCTAATTATAG  947
      |||||||||||||| |||| |||||||||||||| ||||||| |||||||
seq2  TAACATACCAGTTCTTAGC-ACAGGTAGATTCTATTCACGCT-ATTATAG  948

seq1  TTCTAGTGTGGGGA  961
      ||||   |||||||
seq2  TTCTGTGGTGGGGA  962