BAC Information

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BAC

Clone NameB6Ng01-141G15
Chromosome15 (Build37)
Map Location 20,126,975 - 20,297,597
singlet/doubletdoublet
Overlap genenone
Upstream geneEG666875, LOC621884, LOC100040265
Downstream geneAcot10, LOC100040302, Cdh12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141G15.bB6Ng01-141G15.g
ACCDH939879DH939880
length9481,075
definitionDH939879|Mus musculus domesticus DNA, BAC clone: B6Ng01-141G15, 5' end.DH939880|Mus musculus domesticus DNA, BAC clone: B6Ng01-141G15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(20,126,975 - 20,127,811)(20,296,524 - 20,297,597)
sequence
gaattcacaactgaggaatcccgaatggctgagaaacacccaaattgttg
gggcctgatctttatcttgtccctgtgccatttcttattttataattatt
atttctaacttctgcttttaggagatttgttttatgttccctgagtatag
ttaagaaatcttgcagttggaagcttccagccttgagagcttgtggttaa
aactttccttttattcagctgtttgccaagcactttccattcacacagtc
atgtacttgaacaattgattccactttgttaactatggttttgcagcttt
ataagctgagtgggttttttgttagtttgtttgttgtttataaatgaggt
ttaacagctctctgttttgtcgtcttcttttgtgtcctttgtcccatcca
ttcatactccctccctcaagacccttgttgtttagtcctgcaggttggga
cactaaagaaatattcaaagtccttactgaccagagaaatgcaaatcaaa
atgaccctgagattccaccttacatcaatcataatggctaagatcaaaac
ttcaggtgacttcccatgttggcaaggatatggagaaagaggaacactcc
tccattgctggtgggattgccaactggaacaaccactctggaaatcaatc
tagagatttcttttaaaattcaaaatagaactatctgaagactcaccaat
accactcttgagaacaaacccaaaagatgcttgaccatgccacagggaca
tgtgttctactatgaacatatcagccctatttgtgatactaaaagatgaa
aacgacccagatgttccatgacagaagaattgatacagaaaatgtggttc
atttacgcaatggaatactattcatctattaagaaggagaacatcctgag
ttttgcaggcaaatggatggaattagaaaatatcatcctgagtgaggt
gaattcaattctcatgaacacagaagttctcagtttgattaccagaaaaa
ctgtaaaagtactccattccctttaagaaaagactgtactttatcaagcc
gccttctgcttggtgtctccttgattcattaccagaaatgtgtttttttc
ttgctgcaggtgcagggcttttgagagcagcacccatttagaaatgactg
tgtggaattaagacagggataagggtgaacagcaagcagataagttttcc
ccatctattaaagtatgagacagaggaacaatcagaccaaattaagattg
gcgtgcctagggagtctgaagatgacatctcagactgcaaataaattagt
caggttaaatggcatctcagatgggtagtttggaagtctggacattcaag
ctggcagagcaatggtgcagaaaaggttggagagcatggtgctcttacag
aggtggggaaggtaagagctggagctatggcaacattctcgctatgccac
agagatctgcagttaaaaactatttgttttctcctttgtaaattaagaca
gtttagcagggctatttttctttaaccatttttttttctctgtatatgaa
gcacagagttgggggaagaggagcaggaaaagaaccagatataccactaa
agggacccagatgttccatgatgcagaagttaaagataccatacaaaaga
caattaaatttttccaactgtacagttaaacctggattctctgccaggca
gctgaagttcttgaaatgtaattggactaggtccagcagagtggagctgg
ctgtcttccctatctttaggaatcaaactagaaacttatacataaaggtc
aaaagtcatgaacaaaacacacacagaaaatcatagaatgatgttcctga
taaaaggaagcaaacaaaaaggcttttcggatggcttctccttcttgcct
gagattaacagagactgacttattgttaaatcaaaacaaaccaaccaaaa
aaaaaagcagcttccggatggtcttttttccccagcaatgaaatgcccat
aaaccccaaccaagattcaaaaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_20126975_20127811
seq2: B6Ng01-141G15.b_46_882

seq1  GAATTCACAACTGAGGAATCCCGAATGGCTGAGAAACACCCAAATTGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAACTGAGGAATCCCGAATGGCTGAGAAACACCCAAATTGTTG  50

seq1  GGGCCTGATCTTTATCTTGTCCCTGTGCCATTTCTTATTTTATAATTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTGATCTTTATCTTGTCCCTGTGCCATTTCTTATTTTATAATTATT  100

seq1  ATTTCTAACTTCTGCTTTTAGGAGATTTGTTTTATGTTCCCTGAGTATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAACTTCTGCTTTTAGGAGATTTGTTTTATGTTCCCTGAGTATAG  150

seq1  TTAAGAAATCTTGCAGTTGGAAGCTTCCAGCCTTGAGAGCTTGTGGTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAATCTTGCAGTTGGAAGCTTCCAGCCTTGAGAGCTTGTGGTTAA  200

seq1  AACTTTCCTTTTATTCAGCTGTTTGCCAAGCACTTTCCATTCACACAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTCCTTTTATTCAGCTGTTTGCCAAGCACTTTCCATTCACACAGTC  250

seq1  ATGTACTTGAACAATTGATTCCACTTTGTTAACTATGGTTTTGCAGCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACTTGAACAATTGATTCCACTTTGTTAACTATGGTTTTGCAGCTTT  300

seq1  ATAAGCTGAGTGGGTTTTTTGTTAGTTTGTTTGTTGTTTATAAATGAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCTGAGTGGGTTTTTTGTTAGTTTGTTTGTTGTTTATAAATGAGGT  350

seq1  TTAACAGCTCTCTGTTTTGTCGTCTTCTTTTGTGTCCTTTGTCCCATCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGCTCTCTGTTTTGTCGTCTTCTTTTGTGTCCTTTGTCCCATCCA  400

seq1  TTCATACTCCCTCCCTCAAGACCCTTGTTGTTTAGTCCTGCAGGTTGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATACTCCCTCCCTCAAGACCCTTGTTGTTTAGTCCTGCAGGTTGGGA  450

seq1  CACTAAAGAAATATTCAAAGTCCTTACTGACCAGAGAAATGCAAATCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAAGAAATATTCAAAGTCCTTACTGACCAGAGAAATGCAAATCAAA  500

seq1  ATGACCCTGAGATTCCACCTTACATCAATCATAATGGCTAAGATCAAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCCTGAGATTCCACCTTACATCAATCATAATGGCTAAGATCAAAAC  550

seq1  TTCAGGTGACTTCCCATGTTGGCAAGGATATGGAGAAAGAGGAACACTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGTGACTTCCCATGTTGGCAAGGATATGGAGAAAGAGGAACACTCC  600

seq1  TCCATTGCTGGTGGGATTGCCAACTGGAACAACCACTCTGGAAATCAATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGCTGGTGGGATTGCCAACTGGAACAACCACTCTGGAAATCAATC  650

seq1  TAGAGATTTCTTTTAAAATTCAAAATAGAACTATCTGAAGACTCACCAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATTTCTTTTAAAATTCAAAATAGAACTATCTGAAGACTCACCAAT  700

seq1  ACCACTCTTGAGAACAAACCCAAAAGATGCTTGACCATGCCACAGGGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTCTTGAGAACAAACCCAAAAGATGCTTGACCATGCCACAGGGACA  750

seq1  TGTGTTCTACTATGAACATATCAGCCCTATTTGTGATACTAAAAGATGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCTACTATGAACATATCAGCCCTATTTGTGATACTAAAAGATGAA  800

seq1  AACGACCCAGATGTTCCATGACAGAAGAATTGATACA  837
      |||||||||||||||||||||||||||||||||||||
seq2  AACGACCCAGATGTTCCATGACAGAAGAATTGATACA  837

seq1: chr15_20296524_20297597
seq2: B6Ng01-141G15.g_69_1143 (reverse)

seq1  GATTTCTGAATC-TGCTGTGGGTCTATGGGCA-TTCATTGCTGAGGAAGA  48
      ||||| |||||| || |  |||| |||||||| |||||||||| |||| |
seq2  GATTTTTGAATCTTGGTTGGGGTTTATGGGCATTTCATTGCTGGGGAAAA  50

seq1  AAGACCAT-CTGAAGCTGCTTTTTTTTTTGTTTGTTTTGTTTTG-TTTAA  96
      |||||||| | ||||||||||||||||||| ||| ||||||||| |||||
seq2  AAGACCATCCGGAAGCTGCTTTTTTTTTTGGTTGGTTTGTTTTGATTTAA  100

seq1  CAATATGTCAGTCTTCTGTTAATCTCATGCAAGGAGGGAGAGGCCATCTG  146
      ||||| ||||||| ||||||||||||| |||| || ||||| |||||| |
seq2  CAATAAGTCAGTC-TCTGTTAATCTCAGGCAA-GAAGGAGAAGCCATCCG  148

seq1  AAAAGGCCTTTTTGTTTTGCCTTCCTTTTACCAGGAACATCATTCTATGA  196
      |||| ||||||||||||   |||||||||| |||||||||||||||||||
seq2  AAAA-GCCTTTTTGTTT--GCTTCCTTTTATCAGGAACATCATTCTATGA  195

seq1  TTTTCTGTGTGTGTTTTGTTCATGACTTTTGACC-TTATGTATAAGTTTC  245
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTTTCTGTGTGTGTTTTGTTCATGACTTTTGACCTTTATGTATAAGTTTC  245

seq1  TAGTTTGATTCCTAAAGATAGGGAAGACAGCCAGCTCCACTCTGCTGGAC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTGATTCCTAAAGATAGGGAAGACAGCCAGCTCCACTCTGCTGGAC  295

seq1  CTAGTCCAATTACATTTCAAGAACTTCAGCTGCCTGGCAGAGAATCCAGG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCCAATTACATTTCAAGAACTTCAGCTGCCTGGCAGAGAATCCAGG  345

seq1  TTTAACTGTACAGTTGGAAAAA-TTAATTGTCTTTTGTATGGTATCTTTA  394
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTTAACTGTACAGTTGGAAAAATTTAATTGTCTTTTGTATGGTATCTTTA  395

seq1  ACTTCTGCATCATGGAACATCTGGGTCCCTTTAGTGGTATATCTGGTTCT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGCATCATGGAACATCTGGGTCCCTTTAGTGGTATATCTGGTTCT  445

seq1  TTTCCTGCTCCTCTTCCCCCAACTCTGTGCTTCATATACAGAGAAAAAAA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGCTCCTCTTCCCCCAACTCTGTGCTTCATATACAGAGAAAAAAA  495

seq1  AATGGTTAAAGAAAAATAGCCCTGCTAAACTGTCTTAATTTACAAAGGAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTTAAAGAAAAATAGCCCTGCTAAACTGTCTTAATTTACAAAGGAG  545

seq1  AAAACAAATAGTTTTTAACTGCAGATCTCTGTGGCATAGCGAGAATGTTG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAATAGTTTTTAACTGCAGATCTCTGTGGCATAGCGAGAATGTTG  595

seq1  CCATAGCTCCAGCTCTTACCTTCCCCACCTCTGTAAGAGCACCATGCTCT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGCTCCAGCTCTTACCTTCCCCACCTCTGTAAGAGCACCATGCTCT  645

seq1  CCAACCTTTTCTGCACCATTGCTCTGCCAGCTTGAATGTCCAGACTTCCA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCTTTTCTGCACCATTGCTCTGCCAGCTTGAATGTCCAGACTTCCA  695

seq1  AACTACCCATCTGAGATGCCATTTAACCTGACTAATTTATTTGCAGTCTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACCCATCTGAGATGCCATTTAACCTGACTAATTTATTTGCAGTCTG  745

seq1  AGATGTCATCTTCAGACTCCCTAGGCACGCCAATCTTAATTTGGTCTGAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTCATCTTCAGACTCCCTAGGCACGCCAATCTTAATTTGGTCTGAT  795

seq1  TGTTCCTCTGTCTCATACTTTAATAGATGGGGAAAACTTATCTGCTTGCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTCTGTCTCATACTTTAATAGATGGGGAAAACTTATCTGCTTGCT  845

seq1  GTTCACCCTTATCCCTGTCTTAATTCCACACAGTCATTTCTAAATGGGTG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACCCTTATCCCTGTCTTAATTCCACACAGTCATTTCTAAATGGGTG  895

seq1  CTGCTCTCAAAAGCCCTGCACCTGCAGCAAGAAAAAAACACATTTCTGGT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTCAAAAGCCCTGCACCTGCAGCAAGAAAAAAACACATTTCTGGT  945

seq1  AATGAATCAAGGAGACACCAAGCAGAAGGCGGCTTGATAAAGTACAGTCT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATCAAGGAGACACCAAGCAGAAGGCGGCTTGATAAAGTACAGTCT  995

seq1  TTTCTTAAAGGGAATGGAGTACTTTTACAGTTTTTCTGGTAATCAAACTG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTAAAGGGAATGGAGTACTTTTACAGTTTTTCTGGTAATCAAACTG  1045

seq1  AGAACTTCTGTGTTCATGAGAATTGAATTC  1074
      ||||||||||||||||||||||||||||||
seq2  AGAACTTCTGTGTTCATGAGAATTGAATTC  1075