BAC Information

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BAC

Clone NameB6Ng01-141H11
Chromosome15 (Build37)
Map Location 81,242,872 - 81,399,772
singlet/doubletdoublet
Overlap geneXpnpep3, Rbx1, EG383080
Upstream geneEnthd1, Grap2, AW544981, Tnrc6b, Adsl, LOC625672, Rutbc3, Mkl1, LOC675966, Mchr1, Slc25a17, St13, Dnajb7
Downstream geneEp300, L3mbtl2, Rangap1, Zc3h7b, Tef, LOC667073, Tob2, Phf5a, Aco2, Polr3h, Csdc2, Pmm1, EG545121, 1700029P11Rik, D15Wsu75e, Xrcc6, Nhp2l1, 4930407I10Rik, Mei1, Ccdc134, Srebf2, LOC435145, Tnfrsf13c, Cenpm, 1500009C09Rik, Sept3, Wbp2nl, Naga, C920005C14Rik, 1500032L24Rik, Ndufa6, Cyp2d22, LOC545123, Cyp2d10, Cyp2d9, EG545124, EG667196, EG667177, 9030605E09Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141H11.bB6Ng01-141H11.g
ACCDH939918DH939919
length6301,070
definitionDH939918|Mus musculus domesticus DNA, BAC clone: B6Ng01-141H11, 5' end.DH939919|Mus musculus domesticus DNA, BAC clone: B6Ng01-141H11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,399,140 - 81,399,772)(81,242,872 - 81,243,964)
sequence
gaattctttatttttagtttttattttggaggcagggttggaaacagggt
ttctctgtgtagccctggctgtcctggaacttgctccatagaccagactg
gcctcaaactcagagatcagcctgtttctgcctcccagttgctgggtttg
aagttgcaccagcactgcctggttgaattcttattataggctgggccagt
gctaaggtatgaaggtacagtgctgaacgaaacagaaaatatgtatatat
ggagacacacactgaatccagcaaagcagctatgtgtgatgagcacgatg
accggacacacaaagacacaggcagcagggacatccagtggtcttggtag
gtgggcagaaggtgtaagatttatttgggagcagagagagagacagacag
acagatttactgacagtgggagtggttttaaaggaattgaagctccagta
gaggaaacaacattttggagggaacagaccaaagtccatttgaggaactg
aaagaaattctgtgcaaccagaaatagatatgagcctgtttagaagccgg
caagaaatcaggtataatgcaaggaaaaaatgaaaggacaagacagctgg
ggtggtgctgcatgtatgcctgtaattccc
gaattccagggttagcaagtctctgtctgaaaatgcagtgaaatgcaact
gaagtagagacacttgttgtaaacctctagctcccatgcatgcgtgcaca
cttgcatgcacatacgtactcacaaactctcaaacaccacacacaactcc
tatcaaatacgtgccatcaagaatgcttcataggccctaaagaaatcttc
atcttgacctgacttacgatactctacttttgaactgaatatacgtcgaa
gactttacaatcagtacttattgtgtcaggattaaatgagatctgcattg
aatctggatggacgaataagtccaaagatttttaatttaatcctaaattt
gaatctcattttgtccaatgctatatgaccttaaacaaattgtttctcaa
tctctggtcctgataactcatttatttgggggtttttgagacagggtctc
actgtgtagccatggctgtcatagacctcactatgtagaccagtcaggcc
ttgaacttacagagatccactaagccatacaagactttttaagtctgcta
gcagagtaacctagtgttgcactgtatgttctcacgtgttctctctgcct
cctgctgcttccctacattcaagaacacaagtgcctgcctctaggtatga
attttttcaacctacttagggtttaaccttccctctaacccaccacccac
cagaggtagtggaaagaaaggtaattagaatacagaggaagtggacctgt
ttagaaatagttctttggggtgatccagtcttcattgttctcagttcagt
ccactagcagacacttcacaggattcagcaagggcagtcaatccagaaga
aatggtgaggctcaccaatcacccaagttacagaacaggcaggagctgca
ggaactcactagagtctttggcgagttctctctttgagcaccacagcaag
ctcagcatgcatatagcaaccatacatgcctgttgtcacagatcacaggt
ggagctaggcaaccatgctctcttccactgctgtgggaatcaattaatat
ctttccaacatacacatcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_81399140_81399772
seq2: B6Ng01-141H11.b_48_676 (reverse)

seq1  GGAATTACAGGCATACATGCAGCACCACACCCAGCTTGTCTTGTCCTTTC  50
      |||||||||||||||||||||||||||| |||||| ||||||||||||||
seq2  GGAATTACAGGCATACATGCAGCACCAC-CCCAGC-TGTCTTGTCCTTTC  48

seq1  ATTTTTTCCTCTGCATTATACCTGATTTCTTGCACGGCTTCTAAACAGGC  100
      |||||||||| |||||||||||||||||||||| ||||||||||||||||
seq2  ATTTTTTCCT-TGCATTATACCTGATTTCTTGC-CGGCTTCTAAACAGGC  96

seq1  TCATGTCTATTTCTGGTTGCACAGAATTTCTTTCAGTTCCTCAAATGGAC  150
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATCTATTTCTGGTTGCACAGAATTTCTTTCAGTTCCTCAAATGGAC  146

seq1  TTTGGTCTGTTCCCTCCAAAATGTTGTTTCCTCTACTGGAGCTTCAATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTCTGTTCCCTCCAAAATGTTGTTTCCTCTACTGGAGCTTCAATTC  196

seq1  CTTTAAAACCACTCCCACTGTCTGTCTGTCTGTCTGTCTGTCTCTCTCTC  250
      |||||||||||||||||||||| ||   ||||||||||||||||||||||
seq2  CTTTAAAACCACTCCCACTGTCAGTAAATCTGTCTGTCTGTCTCTCTCTC  246

seq1  TGCTCCCAAATAAATCTTACACCTTCTGCCCACCTACCAAGACCACTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCAAATAAATCTTACACCTTCTGCCCACCTACCAAGACCACTGGA  296

seq1  TGTCCCTGCTGCCTGTGTCTTTGTGTGTCCGGTCATCGTGCTCATCACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTGCTGCCTGTGTCTTTGTGTGTCCGGTCATCGTGCTCATCACAC  346

seq1  ATAGCTGCTTTGCTGGATTCAGTGTGTGTCTCCATATATACATATTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTGCTTTGCTGGATTCAGTGTGTGTCTCCATATATACATATTTTCT  396

seq1  GTTTCGTTCAGCACTGTACCTTCATACCTTAGCACTGGCCCAGCCTATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCGTTCAGCACTGTACCTTCATACCTTAGCACTGGCCCAGCCTATAA  446

seq1  TAAGAATTCAACCAGGCAGTGCTGGTGCAACTTCAAACCCAGCAACTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATTCAACCAGGCAGTGCTGGTGCAACTTCAAACCCAGCAACTGGG  496

seq1  AGGCAGAAACAGGCTGATCTCTGAGTTTGAGGCCAGTCTGGTCTATGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAAACAGGCTGATCTCTGAGTTTGAGGCCAGTCTGGTCTATGGAG  546

seq1  CAAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTTTCCAACCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTTTCCAACCCT  596

seq1  GCCTCCAAAATAAAAACTAAAAATAAAGAATTC  633
      |||||||||||||||||||||||||||||||||
seq2  GCCTCCAAAATAAAAACTAAAAATAAAGAATTC  629

seq1: chr15_81242872_81243964
seq2: B6Ng01-141H11.g_69_1138

seq1  GAATTCCAGGGTTAGCAAGTCTCTGTCTGAAAATGCAGTGAAATGCAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGTTAGCAAGTCTCTGTCTGAAAATGCAGTGAAATGCAACT  50

seq1  GAAGTAGAGACACTTGTTGTAAACCTCTAGCTCCCATGCATGCGTGCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAGAGACACTTGTTGTAAACCTCTAGCTCCCATGCATGCGTGCACA  100

seq1  CTTGCATGCACATACGTACTCACAAACTCTCAAACACCACACACAACTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCATGCACATACGTACTCACAAACTCTCAAACACCACACACAACTCC  150

seq1  TATCAAATACGTGCCATCAAGAATGCTTCATAGGCCCTAAAGAAATCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAATACGTGCCATCAAGAATGCTTCATAGGCCCTAAAGAAATCTTC  200

seq1  ATCTTGACCTGACTTACGATACTCTACTTTTGAACTGAATATACGTCGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGACCTGACTTACGATACTCTACTTTTGAACTGAATATACGTCGAA  250

seq1  GACTTTACAATCAGTACTTATTGTGTCAGGATTAAATGAGATCTGCATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTACAATCAGTACTTATTGTGTCAGGATTAAATGAGATCTGCATTG  300

seq1  AATCTGGATGGACGAATAAGTCCAAAGATTTTTAATTTAATCCTAAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGGATGGACGAATAAGTCCAAAGATTTTTAATTTAATCCTAAATTT  350

seq1  GAATCTCATTTTGTCCAATGCTATATGACCTTAAACAAATTGTTTCTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTCATTTTGTCCAATGCTATATGACCTTAAACAAATTGTTTCTCAA  400

seq1  TCTCTGGTCCTGATAACTCATTTATTTGGGGGTTTTTGAGACAGGGTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGTCCTGATAACTCATTTATTTGGGGGTTTTTGAGACAGGGTCTC  450

seq1  ACTGTGTAGCCATGGCTGTCATAGACCTCACTATGTAGACCAGTCAGGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGTAGCCATGGCTGTCATAGACCTCACTATGTAGACCAGTCAGGCC  500

seq1  TTGAACTTACAGAGATCCACTAAGCCATACAAGACTTTTTAAGTCTGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTTACAGAGATCCACTAAGCCATACAAGACTTTTTAAGTCTGCTA  550

seq1  GCAGAGTAACCTAGTGTTGCACTGTATGTTCTCACGTGTTCTCTCTGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGTAACCTAGTGTTGCACTGTATGTTCTCACGTGTTCTCTCTGCCT  600

seq1  CCTGCTGCTTCCCTACATTCAAGAACACAAGTGCCTGCCTCTAGGTATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTGCTTCCCTACATTCAAGAACACAAGTGCCTGCCTCTAGGTATGA  650

seq1  ATTTTTTCAACCTACTTAGGGTTTAACCTTCCCTCTAACCCACCACCCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTCAACCTACTTAGGGTTTAACCTTCCCTCTAACCCACCACCCAC  700

seq1  CAGAGGTAGTGGAAAGAAAGGTAATTAGAATACAGAGGAAGTGGACCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGTAGTGGAAAGAAAGGTAATTAGAATACAGAGGAAGTGGACCTGT  750

seq1  TTAGAAATAGTTCTTTGGGGTGATTCCAGTCTTCATTGTTCTCAGTTCAG  800
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTAGAAATAGTTCTTTGGGGTGA-TCCAGTCTTCATTGTTCTCAGTTCAG  799

seq1  TCCACTAGCAGACACTTCACAGGAATCAGCAAGGGCAGTTCAATCCAGAA  850
      |||||||||||||||||||||||| ||||||||||||| |||||||||||
seq2  TCCACTAGCAGACACTTCACAGGATTCAGCAAGGGCAG-TCAATCCAGAA  848

seq1  GAAATGGTGAGGCTCACCAATCACCCAAGTTAACAGAACAGGCAAGGAGC  900
      ||||||||||||||||||||||||||||||| ||||||||||| ||||||
seq2  GAAATGGTGAGGCTCACCAATCACCCAAGTT-ACAGAACAGGC-AGGAGC  896

seq1  TGCAGGAACCTCACTAGAAGTTCTTTGGCGAGTTTCTCTCTATGAAGTCA  950
      |||||||| |||||||||   ||||||||||| |||||||| |||   ||
seq2  TGCAGGAA-CTCACTAGA--GTCTTTGGCGAG-TTCTCTCTTTGA--GCA  940

seq1  CCACAAGCAAAGCTCAGCAATGCAATATAAGGCAAACCAATACATGCCTG  1000
      |||| ||| ||||||||| |||| |||||  ||||  | |||||||||||
seq2  CCAC-AGC-AAGCTCAGC-ATGC-ATATA--GCAA--CCATACATGCCTG  982

seq1  TTGTCAACAAAGACCAGCAAGGTGGAGCAAGGCAAACCATGCTCTCCTTC  1050
      ||||   || ||| ||   ||||||||| |||| ||||||||||||  | 
seq2  TTGT---CACAGATCA--CAGGTGGAGCTAGGC-AACCATGCTCTC--TT  1024

seq1  CCACTGTCTGTGGG-ATCATATTTATATTCTTTCCAA-----ACATCAC  1093
      |||||| ||||||| |||| ||| ||| |||||||||     |||||||
seq2  CCACTG-CTGTGGGAATCA-ATTAATA-TCTTTCCAACATACACATCAC  1070