BAC Information

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BAC

Clone NameB6Ng01-141H17
Chromosome15 (Build37)
Map Location 32,187,814 - 32,188,964
singlet/doubletsinglet
Overlap geneSema5a
Upstream geneDap, EG625796, 5730557B15Rik, Ropn1l, LOC622810, March6, Cmbl, Cct5, A930016P21Rik, LOC667231, Tas2r119, 0610007N19Rik
Downstream geneLOC100040962, Sdc2, Pgcp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141H17.bB6Ng01-141H17.g
ACCDH939930DH939931
length1,1351,156
definitionDH939930|Mus musculus domesticus DNA, BAC clone: B6Ng01-141H17, 5' end.DH939931|Mus musculus domesticus DNA, BAC clone: B6Ng01-141H17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcggtcccatcaccagcttgtgaagagaaatcattcaggagag
agcgagctggcaaggaagagtctcggagattcattcacttgaaagcctac
gcctgcctgcaaatggtatttaactcaagcagttcctccagggccacctg
ctgagtttccatctcctggaggtttattttggtacttgggaaagccaggg
aaggacttgcagtggggaacatactggacacatccgagaggcaagactta
gcagcaaggcttttagggtttcacactcacggcgtcggagcaatgtcagt
ccgttttccattaccttaatgtaatatacaagactgggtaacttagtaat
aaaagaagttatggttctagagatataaggatgtgtcaccagggaggttt
ggcactaatgagaaccttatgataggtagtatcataatggtggaagaaat
tagacaggaagttgcagccttgggaggagccaacagaaacctccatcgct
taaagatcctacttcctttacatcaccacagggaagatcaggctacttca
tcccattcttgcctggtgtttagtttttgcaactgtaaacaggagacatt
aagacatcatggtgctgtaccccaataataaaacacctagaagacatttc
ttaaaggaacagatacacatttttcactatttcttaaatgtatatgaaag
gagattaatggttggaatttgggccaagggtagagaggaaattgacttcc
ctggtttgtagagaatatatcctgaaattctgatgggaggaggcatttct
gtgtgttgatatcatatggaaaaaagaggatgttttcatgtagattgaaa
tagaaaacatatacttcaggtgcacaccttggggtcccagttctggttgg
tgaagaggagcaggagagactggaacacagaacacctgacaggtggtctc
atttgatctgtgtgaatgactgccttgagaatatctagaacacacaccaa
caccacagctcgcacacgcacgcaagttcattcacaaatttcctcactgt
atctaaatttcttgtctgttttcctactagaaagaatcatgcttcccagt
ggtccaatctaatcggaagcaatgagggtgtgctc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgctgggccctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaagtactcaaagagctaaagggatcttcaccctat
aggtgacacatatgactaaccagtaccctgagctctgacctctagctgca
tatgtatcaaagatggctagtcgcatcactgggaagaaagccaatgggac
cccgaacttgtgtgccgtacaggaacgcccaggcaaaggggggggagtgg
gtggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_32187814_32188964
seq2: B6Ng01-141H17.b_45_1179

seq1  GAATTCCTCGGTCCCATCACCAGCTTGTGAAGAGAAATCATTCAGGAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCGGTCCCATCACCAGCTTGTGAAGAGAAATCATTCAGGAGAG  50

seq1  AGCGAGCTGGCAAGGAAGAGTCTCGGAGATTCATTCACTTGAAAGCCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAGCTGGCAAGGAAGAGTCTCGGAGATTCATTCACTTGAAAGCCTAC  100

seq1  GCCTGCCTGCAAATGGTATTTAACTCAAGCAGTTCCTCCAGGGCCACCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCTGCAAATGGTATTTAACTCAAGCAGTTCCTCCAGGGCCACCTG  150

seq1  CTGAGTTTCCATCTCCTGGAGGTTTATTTTGGTACTTGGGAAAGCCAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTTCCATCTCCTGGAGGTTTATTTTGGTACTTGGGAAAGCCAGGG  200

seq1  AAGGACTTGCAGTGGGGAACATACTGGACACATCCGAGAGGCAAGACTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACTTGCAGTGGGGAACATACTGGACACATCCGAGAGGCAAGACTTA  250

seq1  GCAGCAAGGCTTTTAGGGTTTCACACTCACGGCGTCGGAGCAATGTCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAAGGCTTTTAGGGTTTCACACTCACGGCGTCGGAGCAATGTCAGT  300

seq1  CCGTTTTCCATTACCTTAATGTAATATACAAGACTGGGTAACTTAGTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTTTCCATTACCTTAATGTAATATACAAGACTGGGTAACTTAGTAAT  350

seq1  AAAAGAAGTTATGGTTCTAGAGATATAAGGATGTGTCACCAGGGAGGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAGTTATGGTTCTAGAGATATAAGGATGTGTCACCAGGGAGGTTT  400

seq1  GGCACTAATGAGAACCTTATGATAGGTAGTATCATAATGGTGGAAGAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTAATGAGAACCTTATGATAGGTAGTATCATAATGGTGGAAGAAAT  450

seq1  TAGACAGGAAGTTGCAGCCTTGGGAGGAGCCAACAGAAACCTCCATCGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGGAAGTTGCAGCCTTGGGAGGAGCCAACAGAAACCTCCATCGCT  500

seq1  TAAAGATCCTACTTCCTTTACATCACCACAGGGAAGATCAGGCTACTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATCCTACTTCCTTTACATCACCACAGGGAAGATCAGGCTACTTCA  550

seq1  TCCCATTCTTGCCTGGTGTTTAGTTTTTGCAACTGTAAACAGGAGACATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTCTTGCCTGGTGTTTAGTTTTTGCAACTGTAAACAGGAGACATT  600

seq1  AAGACATCATGGTGCTGTACCCCAATAATAAAACACCTAGAAGACATTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATCATGGTGCTGTACCCCAATAATAAAACACCTAGAAGACATTTC  650

seq1  TTAAAGGAACAGATACACATTTTTCACTATTTCTTAAATGTATATGAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGAACAGATACACATTTTTCACTATTTCTTAAATGTATATGAAAG  700

seq1  GAGATTAATGGTTGGAATTTGGGCCAAGGGTAGAGAGGAAATTGACTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTAATGGTTGGAATTTGGGCCAAGGGTAGAGAGGAAATTGACTTCC  750

seq1  CTGGTTTGTAGAGAATATATCCTGAAATTCTGATGGGAGGAGGCATTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTGTAGAGAATATATCCTGAAATTCTGATGGGAGGAGGCATTTCT  800

seq1  GTGTGTTGATATCATATGGAAAAAAGAGGATGTTTTCATGTAGATTGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTGATATCATATGGAAAAAAGAGGATGTTTTCATGTAGATTGAAA  850

seq1  TAGAAAACATATACTTCAGGTGCACACCTTGGGGTCCCAGTTCTGGTTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAACATATACTTCAGGTGCACACCTTGGGGTCCCAGTTCTGGTTGG  900

seq1  TGAAGAGGAGCAGGAGAGACTGGAACACAGAACACCTGACAGGTGGTCTT  950
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGAAGAGGAGCAGGAGAGACTGGAACACAGAACACCTGACAGGTGGTC-T  949

seq1  CATTTGATCTGTGTGAATGACTGCCTTGAGAATATCCTAGAAACACACAC  1000
      ||||||||||||||||||||||||||||||||||| |||||       ||
seq2  CATTTGATCTGTGTGAATGACTGCCTTGAGAATAT-CTAGA-------AC  991

seq1  ACACACACACACACACACACACACACACACACACACACTCACTCACAAAT  1050
      ||||||  |||| ||||  | | ||||| ||| ||   ||| ||||||| 
seq2  ACACACCAACAC-CACA-GCTCGCACACGCACGCAAGTTCATTCACAAA-  1038

seq1  TTTCCTCACTGTATCTAAATTCCTTGTTCTGTTTTCCTACTAGGAAAAGA  1100
      ||||||||||||||||||||| |||| ||||||||||||||||  |||||
seq2  TTTCCTCACTGTATCTAAATTTCTTG-TCTGTTTTCCTACTAG--AAAGA  1085

seq1  ATCAGGCTCTCCCAGTGGTCATATTATACTGAAATCTAGTGA-GGTGTGC  1149
      |||| ||| |||||||||||  ||   |  | || | | ||| |||||||
seq2  ATCATGCT-TCCCAGTGGTCCAATCTAATCGGAAGC-AATGAGGGTGTGC  1133

seq1  TC  1151
      ||
seq2  TC  1135