BAC Information

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BAC

Clone NameB6Ng01-141K06
Chromosome15 (Build37)
Map Location 21,007,599 - 21,008,743
singlet/doubletsinglet
Overlap genenone
Upstream geneAcot10, LOC100040302
Downstream geneCdh12, LOC100040351
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141K06.bB6Ng01-141K06.g
ACCDH940046DH940047
length1,1351,098
definitionDH940046|Mus musculus domesticus DNA, BAC clone: B6Ng01-141K06, 5' end.DH940047|Mus musculus domesticus DNA, BAC clone: B6Ng01-141K06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccgtgggactcttgtacctagacgctcatctctttcactaggtca
gagaacttttgttctgtgatatttattgaaaatatcctgtgtgtctctgc
tcttatgttctgtgtccagaactcaaaggttagttgctttcatggtgtcc
ctgagttctcccacaatgtgttcatacttatttttaaaacatgtcaatga
cctgcactgagtaatccaattcctctctcttgtctctctttgcacattca
ctttttcctacataatctactctacagaaaagagtttcctctaatgtttt
atttagcttattgagttattttatttcaaatatcctttcagtttgggttt
tcttcagcaattttatctttcttcatacacaggcttgacttactcacttt
attcgtgcctttgcttagttctcttatggtctattactgtctttgagctg
tttggacatacttttcaatttattttgtctgggagttcttaaaattattt
tcactggatgccattttgatgtgacaagtgattagttggagaagatgcag
tcaccaccactttctcagctgttgttctggctggtgagagatgtgtaact
tttatagagcctggttcactaacacagtgaaacctggcccctactttggg
tccacaatgtagaactacacaagcaccaacagtatttgcccaggctcagg
accagctcgcaaaagatattttccaataaaggtatgaatattttcttatt
ccatgtgtacattcattatatatgaaatatattatcatactatgtatatg
ctgctttatgcatacacacatacattcattcatacatagatatatacata
tgatgcaaactaaatcaaacaagctgcttatatcatgctcagtaaatcac
ctatttaaaaccataagttatattttctaggattaaattatatgcaaata
agggtcttctgctccctagtgagttacaatgtgcaatcttttttttatta
catattactttttgtgtttcagacagttatactactttttggtggtttct
ttttttattaaaatttctttacttcatttcaatgttatcccccttctagt
ttcctcctccggaatccctatcctcctcactcccc
gaattcctgatctttccagaatttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ctaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatctttgaaggtctgatagaactctgcactaaacccgtctggtc
ctgggctttttttggctgggagactattaataactgcttctatttcttta
ggggatatgggactgtttagaaggtcaacttgatcctgattcaactttgg
tacctggtatctgtccagaaatttgtccatttcgtctaggttttccagtt
ttgttgagtatagccttttgtagaaggatctgatggtgttttggatttct
tcaggatctgttgttatgtctcccttttcatttctgattttgttaattag
gattttgtcctctgtgccctttagtgagtctagctaagggtttatctatc
ttgttgattttctcaaagaaccaactcctcgtttgtttattcttttgaat
agtttttcttgtttccacttggtgatttcaccccctgagtttgattattt
cctgccgtctacttcctcttgggtgaatttgtttcctttttttctagagc
ttttagatgtggtgtcagctgctagtatgtgctctctcccgttttttctt
ggaggactatagctatgaagtttcctcttagaaatgctttcatgtgtcca
aaggtttgggtaccgtgtggctcattttcttaatctaaaaaggttaattc
ttctaatctctctgaccaaggatctatgaaaaatggcgtctacgtccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_21007599_21008743
seq2: B6Ng01-141K06.b_49_1183

seq1  GAATTCCGTGGGACTCTTGTACCTAGACGCTCATCTCTTTCACTAGGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCGTGGGACTCTTGTACCTAGACGCTCATCTCTTTCACTAGGTCA  50

seq1  GAGAACTTTTGTTCTGTGATATTTATTGAAAATATCCTGTGTGTCTCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTTTTGTTCTGTGATATTTATTGAAAATATCCTGTGTGTCTCTGC  100

seq1  TCTTATGTTCTGTGTCCAGAACTCAAAGGTTAGTTGCTTTCATGGTGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATGTTCTGTGTCCAGAACTCAAAGGTTAGTTGCTTTCATGGTGTCC  150

seq1  CTGAGTTCTCCCACAATGTGTTCATACTTATTTTTAAAACATGTCAATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTCTCCCACAATGTGTTCATACTTATTTTTAAAACATGTCAATGA  200

seq1  CCTGCACTGAGTAATCCAATTCCTCTCTCTTGTCTCTCTTTGCACATTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCACTGAGTAATCCAATTCCTCTCTCTTGTCTCTCTTTGCACATTCA  250

seq1  CTTTTTCCTACATAATCTACTCTACAGAAAAGAGTTTCCTCTAATGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCCTACATAATCTACTCTACAGAAAAGAGTTTCCTCTAATGTTTT  300

seq1  ATTTAGCTTATTGAGTTATTTTATTTCAAATATCCTTTCAGTTTGGGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGCTTATTGAGTTATTTTATTTCAAATATCCTTTCAGTTTGGGTTT  350

seq1  TCTTCAGCAATTTTATCTTTCTTCATACACAGGCTTGACTTACTCACTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGCAATTTTATCTTTCTTCATACACAGGCTTGACTTACTCACTTT  400

seq1  ATTCGTGCCTTTGCTTAGTTCTCTTATGGTCTATTACTGTCTTTGAGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGTGCCTTTGCTTAGTTCTCTTATGGTCTATTACTGTCTTTGAGCTG  450

seq1  TTTGGACATACTTTTCAATTTATTTTGTCTGGGAGTTCTTAAAATTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGACATACTTTTCAATTTATTTTGTCTGGGAGTTCTTAAAATTATTT  500

seq1  TCACTGGATGCCATTTTGATGTGACAAGTGATTAGTTGGAGAAGATGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGATGCCATTTTGATGTGACAAGTGATTAGTTGGAGAAGATGCAG  550

seq1  TCACCACCACTTTCTCAGCTGTTGTTCTGGCTGGTGAGAGATGTGTAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCACCACTTTCTCAGCTGTTGTTCTGGCTGGTGAGAGATGTGTAACT  600

seq1  TTTATAGAGCCTGGTTCACTAACACAGTGAAACCTGGCCCCTACTTTGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGAGCCTGGTTCACTAACACAGTGAAACCTGGCCCCTACTTTGGG  650

seq1  TCCACAATGTAGAACTACACAAGCACCAACAGTATTTGCCCAGGCTCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAATGTAGAACTACACAAGCACCAACAGTATTTGCCCAGGCTCAGG  700

seq1  ACCAGCTCGCAAAAGATATTTTCCAATAAAGGTATGAATATTTTCTTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCTCGCAAAAGATATTTTCCAATAAAGGTATGAATATTTTCTTATT  750

seq1  CCATGTGTACATTCATTATATATGAAATATATTATCATACTTATGTATAT  800
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCATGTGTACATTCATTATATATGAAATATATTATCATAC-TATGTATAT  799

seq1  GCTGCTTTATGCATACACACATACATTCATTCATACATAGATATATACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTTATGCATACACACATACATTCATTCATACATAGATATATACAT  849

seq1  ATGATGCAAACTAAATCAAACAAGCTGCTTATATCATGCTCAGTAAATCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGCAAACTAAATCAAACAAGCTGCTTATATCATGCTCAGTAAATCA  899

seq1  CCTATTTAAAACCATAAGTTATAATTTTCTAGGATTAAATTATATGCAAA  950
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CCTATTTAAAACCATAAGTTAT-ATTTTCTAGGATTAAATTATATGCAAA  948

seq1  TAAGGGTCTCCTGCTCCCTAGTGAGTTTACAATGGTGCAAATCTTTTTTT  1000
      ||||||||| ||||||||||||||| ||||||| |||| |||||||||||
seq2  TAAGGGTCTTCTGCTCCCTAGTGAG-TTACAAT-GTGC-AATCTTTTTTT  995

seq1  TATTACATATTTACTTTTTGTGTTTCAGACATGTTTATTACTACTTTTTG  1050
      ||||||||| ||||||||||||||||||||| |||   ||||||||||||
seq2  TATTACATA-TTACTTTTTGTGTTTCAGACA-GTT--ATACTACTTTTTG  1041

seq1  TGTGTTTCTTTTTTTATTAAATATTTTCTTTACTTTCATTTCAAATGTTA  1100
         |||||||||||||||||  | ||||||||| |||||||| |||||||
seq2  GTGGTTTCTTTTTTTATTAA--AATTTCTTTAC-TTCATTTC-AATGTTA  1087

seq1  TCCCCTCTCCTAGTTTCCT-CTCCGAAAATCCCCTATC-----CACTCCC  1144
      ||||| || |||||||||| ||||| ||   |||||||     |||||||
seq2  TCCCC-CTTCTAGTTTCCTCCTCCGGAA--TCCCTATCCTCCTCACTCCC  1134

seq1  C  1145
      |
seq2  C  1135