BAC Information

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BAC

Clone NameB6Ng01-143D06
Chromosome15 (Build37)
Map Location 69,499,138 - 69,618,288
singlet/doubletdoublet
Overlap genenone
Upstream geneEG665945, EG633752, Khdrbs3
Downstream geneLOC383050
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143D06.bB6Ng01-143D06.g
ACCDH941202DH941203
length586760
definitionDH941202|Mus musculus domesticus DNA, BAC clone: B6Ng01-143D06, 5' end.DH941203|Mus musculus domesticus DNA, BAC clone: B6Ng01-143D06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,617,697 - 69,618,288)(69,499,138 - 69,499,898)
sequence
acaatctaatatagtctgactttaatgattgacttttttcctgggtgagg
agacatcataggggaaaaaatgtccacatatattttatgtttcatctcag
ggctttagttgggtcacagggctttcagaaaacagaaaagcaaaatcact
ctctaggcagaaaacagcatcattatatttagaaagacacttctagccta
aattaagaggattgagcagcagtctaaaaggaagtgtgttgaaaggaatg
aggcatggtgataaataatggcaggaaaccctgagattttttatgcaaat
aaagaagcctataattagccacaaataatcaatgaaagttaggacaaata
atgaagtgatgtcataagaaaataagagagggggggttaaaaagaaagag
gcaaagctcaatctgctttaagagtttagggcgtgccatagtggtacata
attttaattccagaagtcaaagacatatagacctctggaagagcaaggtt
atcttggactacatagctagttacgaaaaaaaaaaaagaaagaaagaaaa
agaaaagaaaagaaaagaagaggaggggaggggagg
gaattctcctaaacagacagtgatggatataattgaatagataggagtac
tcattattgtcatcagagtctgtgtaataataaatttgacataataaagc
ctggtaattctggcagtgttagaaatcaggatgctatgatcagcatgaac
tagattttgactcttctattaacatcatgcaattcaatgtaagaatgtag
gaaacagaccctttacagaagtggttctcagccttcctaaattctgtgat
tcgttagcaattcttcatgttgtggtgtcctgtaaatttattttcactgc
tacttcataactgtaattttgctacatttgtaattacaaattgcagtgta
aatatttttagagatagaagtttgccatggattcatgacccacagattga
gaataacttttttaaaggggtaatgaaagggacaaggtttaggttttgga
ggtcagtacatctcacatggtatccctcaaaatgtgatcttatgggtatc
tacactgattgcccaaatgttatgtgaaaaccacaaatataagtcatcac
taggtaatattgtgtttcaaggtacaagcttgctctgtaatcccagaaca
catggggttaaaaataggaggatcagaatttcaaggtcaccttcagctac
acaatgaattcaaggccaaactaaaatacttgatatcctgtctcaagatt
ttaaaagaggtgtaatgagttttatgtttgggagatatatatatatgtgt
gtgttgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_69617697_69618288
seq2: B6Ng01-143D06.b_50_641 (reverse)

seq1  CCTCCCCTCCCCTCCTCTTCTTTTCTTTTCTTTTCTTTTTCTTTCTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCTCCCCTCCTCTTCTTTTCTTTTCTTTTCTTTTTCTTTCTTTCT  50

seq1  TTTTTTTTTTTCGTAACTAGCTATGTAGTCCAAGATAACCTTGCTCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTCGTAACTAGCTATGTAGTCCAAGATAACCTTGCTCTTCC  100

seq1  AGAGGTCTATATGTCTTTGACTTCTGGAATTAAAATTATGTACCACTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTCTATATGTCTTTGACTTCTGGAATTAAAATTATGTACCACTATG  150

seq1  GCACGCCCTAAACTCTTAAAGCAGATTGAGCTTTGCCTCTTTCTTTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGCCCTAAACTCTTAAAGCAGATTGAGCTTTGCCTCTTTCTTTTTAA  200

seq1  CCCCCCCTCTCTTATTTTCTTATGACATCACTTCATTATTTGTCCTAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCTCTCTTATTTTCTTATGACATCACTTCATTATTTGTCCTAACT  250

seq1  TTCATTGATTATTTGTGGCTAATTATAGGCTTCTTTATTTGCATAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGATTATTTGTGGCTAATTATAGGCTTCTTTATTTGCATAAAAAA  300

seq1  TCTCAGGGTTTCCTGCCATTATTTATCACCATGCCTCATTCCTTTCAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGGTTTCCTGCCATTATTTATCACCATGCCTCATTCCTTTCAACA  350

seq1  CACTTCCTTTTAGACTGCTGCTCAATCCTCTTAATTTAGGCTAGAAGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCTTTTAGACTGCTGCTCAATCCTCTTAATTTAGGCTAGAAGTGT  400

seq1  CTTTCTAAATATAATGATGCTGTTTTCTGCCTAGAGAGTGATTTTGCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTAAATATAATGATGCTGTTTTCTGCCTAGAGAGTGATTTTGCTTT  450

seq1  TCTGTTTTCTGAAAGCCCTGTGACCCAACTAAAGCCCTGAGATGAAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTTCTGAAAGCCCTGTGACCCAACTAAAGCCCTGAGATGAAACAT  500

seq1  AAAATATATGTGGACATTTTTTCCCCTATGATGTCTCCTCACCCAGGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATATGTGGACATTTTTTCCCCTATGATGTCTCCTCACCCAGGAAA  550

seq1  AAAGTCAATCATTAAAGTCAGACTATATTAGATTGTGAATTC  592
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCAATCATTAAAGTCAGACTATATTAGATTGTGAATTC  592

seq1: chr15_69499138_69499898
seq2: B6Ng01-143D06.g_68_827

seq1  GAATTCTCCTAAACAGACAGTGATGGATATAATTGAATAGATAGGAGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTAAACAGACAGTGATGGATATAATTGAATAGATAGGAGTAC  50

seq1  TCATTATTGTCATCAGAGTCTGTGTAATAATAAATTTGACATAATAAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATTGTCATCAGAGTCTGTGTAATAATAAATTTGACATAATAAAGC  100

seq1  CTGGTAATTCTGGCAGTGTTAGAAATCAGGATGCTATGATCAGCATGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAATTCTGGCAGTGTTAGAAATCAGGATGCTATGATCAGCATGAAC  150

seq1  TAGATTTTGACTCTTCTATTAACATCATGCAATTCAATGTAAGAATGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTTGACTCTTCTATTAACATCATGCAATTCAATGTAAGAATGTAG  200

seq1  GAAACAGACCCTTTACAGAAGTGGTTCTCAGCCTTCCTAAATTCTGTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGACCCTTTACAGAAGTGGTTCTCAGCCTTCCTAAATTCTGTGAT  250

seq1  TCGTTAGCAATTCTTCATGTTGTGGTGTCCTGTAAATTTATTTTCACTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTAGCAATTCTTCATGTTGTGGTGTCCTGTAAATTTATTTTCACTGC  300

seq1  TACTTCATAACTGTAATTTTGCTACATTTGTAATTACAAATTGCAGTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCATAACTGTAATTTTGCTACATTTGTAATTACAAATTGCAGTGTA  350

seq1  AATATTTTTAGAGATAGAAGTTTGCCATGGATTCATGACCCACAGATTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTTAGAGATAGAAGTTTGCCATGGATTCATGACCCACAGATTGA  400

seq1  GAATAACTTTTTTAAAGGGGTAATGAAAGGGACAAGGTTTAGGTTTTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAACTTTTTTAAAGGGGTAATGAAAGGGACAAGGTTTAGGTTTTGGA  450

seq1  GGTCAGTACATCTCACATGGTATCCCTCAAAATGTGATCTTATGGGTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGTACATCTCACATGGTATCCCTCAAAATGTGATCTTATGGGTATC  500

seq1  TACACTGATTGCCCAAATGTTATGTGAAAACCACAAATATAAGTCATCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGATTGCCCAAATGTTATGTGAAAACCACAAATATAAGTCATCAC  550

seq1  TAGGTAATATTGTGTTTCAAGGTACAAGCTTGCTCTGTAATCCCAGAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAATATTGTGTTTCAAGGTACAAGCTTGCTCTGTAATCCCAGAACA  600

seq1  CATGGGGTTAAAAATAGGAGGATCAGAATTTCAAGGTCACCTTCAGCTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGGTTAAAAATAGGAGGATCAGAATTTCAAGGTCACCTTCAGCTAC  650

seq1  ACAATGAATTCAAGGCCAAACTAAAATACTTGATATCCTGTCTCAAGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGAATTCAAGGCCAAACTAAAATACTTGATATCCTGTCTCAAGATT  700

seq1  TTAAAAGAGGTGTAATGAGTTTTATGTTTGGGAGATATATATATATGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGAGGTGTAATGAGTTTTATGTTTGGGAGATATATATATATGTGT  750

seq1  GTGTGTGTGTG  761
      |||| ||||||
seq2  GTGT-TGTGTG  760