BAC Information

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BAC

Clone NameB6Ng01-143D14
Chromosome15 (Build37)
Map Location 11,289,032 - 11,391,957
singlet/doubletdoublet
Overlap geneTars
Upstream geneAgxt2, 4930461P20Rik, Bxdc2, Rad1, 4930401A09Rik, EG666579, Rai14, C1qtnf3, Amacr, Slc45a2, Rxfp3, Adamts12
Downstream geneLOC100039772, Npr3, LOC381002, Sub1, LOC100040027, Zfr, LOC100040052, LOC100040066, Mtmr12, LOC100039846, Golph3, Pdzd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143D14.bB6Ng01-143D14.g
ACCDH941218DH941219
length1,0881,081
definitionDH941218|Mus musculus domesticus DNA, BAC clone: B6Ng01-143D14, 5' end.DH941219|Mus musculus domesticus DNA, BAC clone: B6Ng01-143D14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,390,850 - 11,391,957)(11,289,032 - 11,290,137)
sequence
gaattctgtgattcataactaattaaagtaatttagatttgctatattga
aattggtacttaggacttataattatcaatattccctataaccgcctgcg
gccacactaattgggttcctgagtgggaggccagagctgtatggaaggaa
acgatgagagaaataatggaggccaagacatgtttctgttcaaggccccc
aagtttactaagagtctgtgcttataaaggggggaggcccatcccctgcc
aatccattcttggtgcctgttgccagcctgtaggcgatctgccagatgct
gtctccagaatatctcaagggcctctcagcaggtagcagtgtcttggaga
agagcagcagcaggtgacagaacaatagagccatctaagtcagagggctc
caccccaggtggtcttaaactcagtggcagcaaggtcaaagccagcctat
tcaaggctgcgggaggctgcaattccccatcaaaatattgcttacagcag
agctactcaagtgttttccatagtaatggtactgatcccttaaagacatg
tagtttacttttaaaatgcctgtgtccaaggttaaccttcatgacaactg
ttagtgacagttcccccaagtcattgaatcaagcattaaatctgggattt
agctgctaactattagttaagtaaatctccatgtgttacctgtatgtaaa
accagctggtattcttaggatctaaaagagaaatccttgatttttatcag
caccaaatcaacacaagcaatttcctaacagccttagtcttgttctccac
ggtctaacagaggctaagctgtatgcaagcaatcacttgatcagttcttc
ctctaggggataaaaaatttcatcaaggccacagaagaccccaaatcagc
ttgttcctcacaaagataatgatgaacaaaaaacaggaacatgttttttg
tttgtttggttggtttgtttgttctgtttgtgtgtgtgtgtgttgttgtg
tatcgaaagcatatctaccaagaataatctcttttgaaaaacatgtaaaa
tgccttcatttgctgggttggtggatgaaacaagcatg
gaattcaaatatcaatagaaccaaaatgggtggatctactggagctggct
gtcctcttgccatccatctgaagggttacaaggaatgggatgccaagaag
ggcgctcagaatcagggaccaagagcatctgttatctaggtctcagttgg
cgagatgctgaagacagtttttggcctccatgagagcctctttatttcta
tacaaactgatgtattagaaggagcctgtgaggtctctgactatatatta
tagctactagcttggtattgtatgggactcctgagtctgagaaaaggtgg
gtctctgacacttgtgcctgctcttggaatactcttcgtcctgttggatt
gccacgactaacttcactatgatagtttttgtgatagtttttgttttatc
ttaattttttaaaacgttgtcatgtttgagggtcatacctttagaagcct
actcttttctaatgaagagacagaaagggagtagatctagagggcagagg
aggtaggaaagaactgggaagactaaagggaggggaaattataatcagga
tatattgtatgagaaaataattatcttcaataaaaagaaaaaaaggaaag
gaaattaaaaagacaaggaaagggcctgatgaagacgtttgacccaaggt
ccacctgctgccattccgctgccacaggatgcttgctctttcagaggtgt
gctatccacccagcatgcctcgtcaactgtgtctgccagctagaggaaca
aagctaaaggcactgtagctctcccacattaatcaagccgtttagcttct
gggccagtctcatcctgtgggcaaatagagaccaactgaacaacagtaaa
acctttctcacctttttactggttctccctgaatttcacgccatgtaccc
aatctcactcatttcccctcccttcactcgccctcatcttgcagaagtga
aaataatttcattatggagtctagtatgtcagtgtgtcacaggatatctt
tgtttaacatttcttcttgcaatgttcatgtgaagagtttagttgtattg
ttctttgcttctcaaccatcatactggaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_11390850_11391957
seq2: B6Ng01-143D14.b_48_1135 (reverse)

seq1  CATGCTTGTGTCATCCACCAACCCCCAGCAAATGAAGGCAATTTTACATG  50
      ||||||||| |||||||||||  |||||||||||||||| ||||||||||
seq2  CATGCTTGTTTCATCCACCAA--CCCAGCAAATGAAGGC-ATTTTACATG  47

seq1  TTTTTCAAAAGAAGATTAGTTCTTGGTAGATATGGCTTTCTGAATAACAA  100
      ||||||||||| |||||| |||||||||||||| ||||||   |||    
seq2  TTTTTCAAAAG-AGATTA-TTCTTGGTAGATAT-GCTTTC--GATA----  88

seq1  CAACAACAACAACAACAACAACAACAAAAAACAGAAACAAAACCAAAACC  150
              |||||||||   |||   | |||||| ||||||    |||||
seq2  -------CACAACAACACACACACACACAAACAG-AACAAA---CAAACC  127

seq1  AACCAAACAAACAAAAAACATGTTCCTG-TTTTTGTTCATCATTATCTTT  199
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AACCAAACAAACAAAAAACATGTTCCTGTTTTTTGTTCATCATTATCTTT  177

seq1  GTGAGGAACAAGCTGATTTGGGGTCTTCTGTGGCC-TGATGAAA-TTTTT  247
      ||||||||||||||||||||||||||||||||||| |||||||| |||||
seq2  GTGAGGAACAAGCTGATTTGGGGTCTTCTGTGGCCTTGATGAAATTTTTT  227

seq1  ATCCCCTAGAGGAAGAACTGATCAAGTGATTGCTTGCATACAGCTTAGCC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTAGAGGAAGAACTGATCAAGTGATTGCTTGCATACAGCTTAGCC  277

seq1  TCTGTTAGACCGTGGAGAACAAGACTAAGGCTGTTAGGAAATTGCTTGTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTAGACCGTGGAGAACAAGACTAAGGCTGTTAGGAAATTGCTTGTG  327

seq1  TTGATTTGGTGCTGATAAAAATCAAGGATTTCTCTTTTAGATCCTAAGAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTGGTGCTGATAAAAATCAAGGATTTCTCTTTTAGATCCTAAGAA  377

seq1  TACCAGCTGGTTTTACATACAGGTAACACATGGAGATTTACTTAACTAAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGCTGGTTTTACATACAGGTAACACATGGAGATTTACTTAACTAAT  427

seq1  AGTTAGCAGCTAAATCCCAGATTTAATGCTTGATTCAATGACTTGGGGGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGCAGCTAAATCCCAGATTTAATGCTTGATTCAATGACTTGGGGGA  477

seq1  ACTGTCACTAACAGTTGTCATGAAGGTTAACCTTGGACACAGGCATTTTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCACTAACAGTTGTCATGAAGGTTAACCTTGGACACAGGCATTTTA  527

seq1  AAAGTAAACTACATGTCTTTAAGGGATCAGTACCATTACTATGGAAAACA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAAACTACATGTCTTTAAGGGATCAGTACCATTACTATGGAAAACA  577

seq1  CTTGAGTAGCTCTGCTGTAAGCAATATTTTGATGGGGAATTGCAGCCTCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTAGCTCTGCTGTAAGCAATATTTTGATGGGGAATTGCAGCCTCC  627

seq1  CGCAGCCTTGAATAGGCTGGCTTTGACCTTGCTGCCACTGAGTTTAAGAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGCCTTGAATAGGCTGGCTTTGACCTTGCTGCCACTGAGTTTAAGAC  677

seq1  CACCTGGGGTGGAGCCCTCTGACTTAGATGGCTCTATTGTTCTGTCACCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGGGGTGGAGCCCTCTGACTTAGATGGCTCTATTGTTCTGTCACCT  727

seq1  GCTGCTGCTCTTCTCCAAGACACTGCTACCTGCTGAGAGGCCCTTGAGAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGCTCTTCTCCAAGACACTGCTACCTGCTGAGAGGCCCTTGAGAT  777

seq1  ATTCTGGAGACAGCATCTGGCAGATCGCCTACAGGCTGGCAACAGGCACC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGAGACAGCATCTGGCAGATCGCCTACAGGCTGGCAACAGGCACC  827

seq1  AAGAATGGATTGGCAGGGGATGGGCCTCCCCCCTTTATAAGCACAGACTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGGATTGGCAGGGGATGGGCCTCCCCCCTTTATAAGCACAGACTC  877

seq1  TTAGTAAACTTGGGGGCCTTGAACAGAAACATGTCTTGGCCTCCATTATT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAAACTTGGGGGCCTTGAACAGAAACATGTCTTGGCCTCCATTATT  927

seq1  TCTCTCATCGTTTCCTTCCATACAGCTCTGGCCTCCCACTCAGGAACCCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCATCGTTTCCTTCCATACAGCTCTGGCCTCCCACTCAGGAACCCA  977

seq1  ATTAGTGTGGCCGCAGGCGGTTATAGGGAATATTGATAATTATAAGTCCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTGTGGCCGCAGGCGGTTATAGGGAATATTGATAATTATAAGTCCT  1027

seq1  AAGTACCAATTTCAATATAGCAAATCTAAATTACTTTAATTAGTTATGAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACCAATTTCAATATAGCAAATCTAAATTACTTTAATTAGTTATGAA  1077

seq1  TCACAGAATTC  1108
      |||||||||||
seq2  TCACAGAATTC  1088

seq1: chr15_11289032_11290137
seq2: B6Ng01-143D14.g_67_1147

seq1  GAATTCAAATATCAATAGAACCAAAATGGGTGGATCTACTGGAGCTGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATATCAATAGAACCAAAATGGGTGGATCTACTGGAGCTGGCT  50

seq1  GTCCTCTTGCCATCCATCTGAAGGGTTACAAGGAATGGGATGCCAAGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCTTGCCATCCATCTGAAGGGTTACAAGGAATGGGATGCCAAGAAG  100

seq1  GGCGCTCAGAATCAGGGACCAAGAGCATCTGTTATCTAGGTCTCAGTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCTCAGAATCAGGGACCAAGAGCATCTGTTATCTAGGTCTCAGTTGG  150

seq1  CGAGATGCTGAAGACAGTTTTTGGCCTCCATGAGAGCCTCTTTATTTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGATGCTGAAGACAGTTTTTGGCCTCCATGAGAGCCTCTTTATTTCTA  200

seq1  TACAAACTGATGTATTAGAAGGAGCCTGTGAGGTCTCTGACTATATATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACTGATGTATTAGAAGGAGCCTGTGAGGTCTCTGACTATATATTA  250

seq1  TAGCTACTAGCTTGGTATTGTATGGGACTCCTGAGTCTGAGAAAAGGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTACTAGCTTGGTATTGTATGGGACTCCTGAGTCTGAGAAAAGGTGG  300

seq1  GTCTCTGACACTTGTGCCTGCTCTTGGAATACTCTTCGTCCTGTTGGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGACACTTGTGCCTGCTCTTGGAATACTCTTCGTCCTGTTGGATT  350

seq1  GCCACGACTAACTTCACTATGATAGTTTTTGTGATAGTTTTTGTTTTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACGACTAACTTCACTATGATAGTTTTTGTGATAGTTTTTGTTTTATC  400

seq1  TTAATTTTTTAAAACGTTGTCATGTTTGAGGGTCATACCTTTAGAAGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTTTAAAACGTTGTCATGTTTGAGGGTCATACCTTTAGAAGCCT  450

seq1  ACTCTTTTCTAATGAAGAGACAGAAAGGGAGTAGATCTAGAGGGCAGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTTCTAATGAAGAGACAGAAAGGGAGTAGATCTAGAGGGCAGAGG  500

seq1  AGGTAGGAAAGAACTGGGAAGACTAAAGGGAGGGGAAATTATAATCAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGGAAAGAACTGGGAAGACTAAAGGGAGGGGAAATTATAATCAGGA  550

seq1  TATATTGTATGAGAAAATAATTATCTTCAATAAAAAGAAAAAAAGGAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGTATGAGAAAATAATTATCTTCAATAAAAAGAAAAAAAGGAAAG  600

seq1  GAAATTAAAAAGACAAGGAAAGGGCCTGATGAAGACGTTTGACCCAAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTAAAAAGACAAGGAAAGGGCCTGATGAAGACGTTTGACCCAAGGT  650

seq1  CCACCTGCTGCCATTCCGCTGCCACAGGATGCTTGCTCTTTCAGAGGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGCTGCCATTCCGCTGCCACAGGATGCTTGCTCTTTCAGAGGTGT  700

seq1  GCTATCCACCCAGCATGCCTCGTCAACTGTGTCTGCCAGCTAGAGGAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GCTATCCACCCAGCATGCCTCGTCAACTGTGTCTGCCAGCTAGAGGAAC-  749

seq1  AAAGCTAAAGGCACTGTAGCTCTCCCACATTAATCAAGCCGTTTAGCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTAAAGGCACTGTAGCTCTCCCACATTAATCAAGCCGTTTAGCTTC  799

seq1  TGGGCCAGTCTTCATCCTGTGGGCAAAATAGAGACCAACTGAACAACAGT  850
      |||||||||| ||||||||||||| |||||||||||||||||||||||||
seq2  TGGGCCAGTC-TCATCCTGTGGGC-AAATAGAGACCAACTGAACAACAGT  847

seq1  AAAACCTTTCTCACCTTTTTACTGGTTCTCCCTGAATTTCACGCCATGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTTTCTCACCTTTTTACTGGTTCTCCCTGAATTTCACGCCATGTA  897

seq1  CCCCAATCTCACTCATTTTCCCCTCCCCTTCCACTCGCCCTCCATCCTTG  950
       |||||||||||||| |||||||||||  | |||||||||| ||| ||||
seq2  -CCCAATCTCACTCA-TTTCCCCTCCC--TTCACTCGCCCT-CAT-CTTG  941

seq1  CAGAGTGGAAAATAATTTCATTATGGAGTCTAGTATGTCAAGTGTGTTCC  1000
      ||||   |||||||||||||||||||||||||||||||| |||||||  |
seq2  CAGAAGTGAAAATAATTTCATTATGGAGTCTAGTATGTC-AGTGTGT--C  988

seq1  ACAGGATATCCTTTTGTCT-ACATTTCTTTCCTTGCAAATGTTCATTGTG  1049
      ||||||||||  ||||| | |||||||||  ||||| |||||||| ||||
seq2  ACAGGATATC--TTTGTTTAACATTTCTT--CTTGC-AATGTTCA-TGTG  1032

seq1  AAGAGTCTTTGGTCTGGTATGTGTCCTCTGGCTTCTCACTCAATCATTAC  1099
      |||||  ||| |  | |||| ||| || | ||||||||  | |||| |||
seq2  AAGAG--TTTAG--TTGTAT-TGTTCT-TTGCTTCTCA-ACCATCA-TAC  1074

seq1  TGGAACC  1106
      |||||||
seq2  TGGAACC  1081