BAC Information

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BAC

Clone NameB6Ng01-144H20
Chromosome15 (Build37)
Map Location 63,159,006 - 63,159,836
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040430, Tsg101-ps
Downstream geneEG239502, EG432959, LOC672194, Mlze, AI987692, Gsdmdc2, 9930109F21Rik, LOC665769, 9030605I04Rik, 4933426G20Rik, 0910001A06Rik, Ddef1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144H20.bB6Ng01-144H20.g
ACCDH942155DH942156
length1,191896
definitionDH942155|Mus musculus domesticus DNA, BAC clone: B6Ng01-144H20, 5' end.DH942156|Mus musculus domesticus DNA, BAC clone: B6Ng01-144H20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgctttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagagcaagccattgctgtt
ctgttcaggaatttttcccctgtacccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
cctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatcttttacttccttagttagagtcacgccgagatatttttatatta
tttgtgactattgaggaggtgttgtttcccttatttctttttcagcctgt
ttattctttggttagagaaggcattgacttgtttgagtaattttatatca
gctacttcacggaggctgtttaatcaggttaggagtccttgggtgaattt
ttggtcactatatatactactgattcatctgcaagatggaattggcctcc
tctttgcagttgatccctggattccgtgttgctaatggtct
gaattcatcttctggggaccaaccacaggagagactcatcagctcctgca
tttgcagatggctactcatgatggacactcaaggtcggcttgctgccttt
tctttctaagtgaggaacatgtaatatactgaagtctgatcacagttgtc
agtgcctagttcacaagatgggatgaccatggtaacgtgggtacactgtg
aaattcacaaaccttatatgaaacataaatagcataagtagaagttagag
acatggggaattaacgtagggaggagaaagatgagtcactcagaaacttc
tgttctctcagaaatgttaggaaaagggctcttttttattggttatttta
tttatttatatttcaaatgttatcccccttcccagtttcccctcctcaaa
ttccctattccctcccccttaccacctgtttctatgagagtgctccccct
cccacccatccattcctgcctcacttgccctcgcatttccctgtactagg
gcatccagccttcacaggatcaagggcctcccctctcattgatgccagac
aaggcaatcaatcctctgcttcatatgcagctagagacatgggtccttcc
atgtctactccttggttggtagtttagtccttgggagctctggagggttc
tagttggttgatactgttctttctatgggttgcaaaccccttcaggtcct
tcaatccttcccccctaattcctccattttggtccctgtgctcagtctaa
tggttgactgcaaacatctgcatcagtattggtcatgctctggcagagcc
tctcaggagacagctatatctggctcttgtcagcaagcacttcttgttat
caacaatagtgtctgggtgtaatgtctgcattatgggatagatttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_63159006_63159836
seq2: B6Ng01-144H20.g_65_895

seq1  GAATTCATCTTCTGGGGACCAACCACAGGAGAGACTCATCAGCTCCTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTTCTGGGGACCAACCACAGGAGAGACTCATCAGCTCCTGCA  50

seq1  TTTGCAGATGGCTACTCATGATGGACACTCAAGGTCGGCTTGCTGCCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGATGGCTACTCATGATGGACACTCAAGGTCGGCTTGCTGCCTTT  100

seq1  TCTTTCTAAGTGAGGAACATGTAATATACTGAAGTCTGATCACAGTTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTAAGTGAGGAACATGTAATATACTGAAGTCTGATCACAGTTGTC  150

seq1  AGTGCCTAGTTCACAAGATGGGATGACCATGGTAACGTGGGTACACTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTAGTTCACAAGATGGGATGACCATGGTAACGTGGGTACACTGTG  200

seq1  AAATTCACAAACCTTATATGAAACATAAATAGCATAAGTAGAAGTTAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCACAAACCTTATATGAAACATAAATAGCATAAGTAGAAGTTAGAG  250

seq1  ACATGGGGAATTAACGTAGGGAGGAGAAAGATGAGTCACTCAGAAACTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGGGAATTAACGTAGGGAGGAGAAAGATGAGTCACTCAGAAACTTC  300

seq1  TGTTCTCTCAGAAATGTTAGGAAAAGGGCTCTTTTTTATTGGTTATTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCTCAGAAATGTTAGGAAAAGGGCTCTTTTTTATTGGTTATTTTA  350

seq1  TTTATTTATATTTCAAATGTTATCCCCCTTCCCAGTTTCCCCTCCTCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATATTTCAAATGTTATCCCCCTTCCCAGTTTCCCCTCCTCAAA  400

seq1  TTCCCTATTCCCTCCCCCTTACCACCTGTTTCTATGAGAGTGCTCCCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTATTCCCTCCCCCTTACCACCTGTTTCTATGAGAGTGCTCCCCCT  450

seq1  CCCACCCATCCATTCCTGCCTCACTTGCCCTCGCATTTCCCTGTACTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCATCCATTCCTGCCTCACTTGCCCTCGCATTTCCCTGTACTAGG  500

seq1  GCATCCAGCCTTCACAGGATCAAGGGCCTCCCCTCTCATTGATGCCAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCAGCCTTCACAGGATCAAGGGCCTCCCCTCTCATTGATGCCAGAC  550

seq1  AAGGCAATCAATCCTCTGCTTCATATGCAGCTAGAGACATGGGTCCTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAATCAATCCTCTGCTTCATATGCAGCTAGAGACATGGGTCCTTCC  600

seq1  ATGTCTACTCCTTGGTTGGTAGTTTAGTCCTTGGGAGCTCTGGAGGGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTACTCCTTGGTTGGTAGTTTAGTCCTTGGGAGCTCTGGAGGGTTC  650

seq1  TAGTTGGTTGATACTGTTCTTTCTATGGGTTGCAAACCCCTTCAGGTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGGTTGATACTGTTCTTTCTATGGGTTGCAAACCCCTTCAGGTCCT  700

seq1  TCAATCCTTCCCCCCTAATTCCTCCATTTTGGTCCCTGTGCTCAGTCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCCTTCCCCCCTAATTCCTCCATTTTGGTCCCTGTGCTCAGTCTAA  750

seq1  TGGTTGACTGCAAACATCTGCATCAGTATTGGTCATGCTCTGGCAGAGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGACTGCAAACATCTGCATCAGTATTGGTCATGCTCTGGCAGAGCC  800

seq1  TCTCAGGAGACAGCTATATCTGGCTCTTGTC  831
      |||||||||||||||||||||||||||||||
seq2  TCTCAGGAGACAGCTATATCTGGCTCTTGTC  831