BAC Information

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BAC

Clone NameB6Ng01-145P14
Chromosome15 (Build37)
Map Location 40,995,590 - 41,180,294
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC670013, LOC664872, Zfpm2, Ppia-ps25
Downstream geneOxr1, Abra, EG432946, LOC432947, LOC100039268
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145P14.bB6Ng01-145P14.g
ACCDH943237DH943238
length1,1291,058
definitionDH943237|Mus musculus domesticus DNA, BAC clone: B6Ng01-145P14, 5' end.DH943238|Mus musculus domesticus DNA, BAC clone: B6Ng01-145P14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(41,179,145 - 41,180,294)(40,995,590 - 40,996,654)
sequence
gaattcaaggcagaacaactgtcaacagttgactaggaaaaagtagtcag
tccctcaaaaatccaaacccagctgattattaataattcattaggacgaa
agacttgtgggcctagaagttcttagcatggtaagatgaaatataaactg
tagggctttccttaagagagtaattttacttataatctcagtagttcata
attcgtatctcactaaataatacctgaaaattttgataagggttgagaaa
cctggacagaataagattaaaaattcaactctgaactatagtcaaataaa
tgaagcaccagaacaatatgaatttcttttcttatcaaatgtagaattac
taaaaatagtgcagttgcaaccatgtcaacacaaaattgttatataatat
gcaaatcatagaaacatgaaactatccagaatagaactaattcatataca
aaattctacttcagatgtagtcaatgcaatggataaaaaaataaactatt
aacctatgatgaatgagctgactacttgtagaataaataaaaattatcac
ttaaatcatacagataaattaacattaattcaatatgattaaaaatgtta
agtatcttaaataaccaattacatttaaactaagaccgagaaaataaaga
taaaagagaagttaaactatttaattaactaaaatttgaaatattcttaa
ggtacaaaataaactgcggatatttaaatgccccaaatttaaaacattat
gcatgtttcacatgaaaagctaatagttctagtctgtcaaactcatttta
caaactgaggtgaaaaaaacccatgaacattaaaataggcaatcttgtgc
tgcaggaaatattaaaaagtgaaccgccactctctccagcgattccccgc
agcatctggctcttttgtcccgggagccactagttccctctctgctgtat
cccctgtacagtggtccacacttcaattgctgtgctccccagctcttgtt
cacttgtccctggcaccacgctaattcttcctcagcataagcccatgtag
taggcatcccacattcagtacaatgacctccacctctggctgcattcaca
ttctgtaacccagtaatcaagactcttaa
gaattcaaaggattcacccacctaatggtgtgttgaagaggccagttcag
gacctttggaaaatgccaccagacccctcccctcctggaagaaaaaaggt
catggaacacttaggcacccctcccctccagaaaggaggggctaattaac
attcctcagccaaggtggggcgggagacactgatcaacctctacctgcag
gctggggaggtccaaaggaggtaaacacattctgtaggacagacctacag
acaaggccacctacagacaagggaagttcttgccacctcattcccctagt
gaccaatcagtttaaaaattacactgttctgccaatcacattgtgactaa
tggctgctgctccgaaaactgtataaaaaactccctgactgggctgcttg
aggctgcctctccttccggtgcaggatgaccccaaacgcattggaacaat
aaattcctcttgctttttgcatgcttcccccactctgagtggttcaatca
ggggtccccagtaagctaaggctcatcagagtcttacaatgccatcttca
gattccaaagtaactagatgtgctgggagcgcaaacttaatccctattca
tcaaaagtcgctctgtttaattttggtcgcacaaatgacatcgttataaa
taaacctaatatgctatcagtcaattataaatgttcaactatttcataat
aaaatacatttcatagtggtcactatttgtatagctgaaaaaaatccatc
ctattatgaaatatggcaaaactgatatgggttaataacgtgtttgtaaa
ctactaatggataaaaaacgtctgacactgaagtctacagaagcagtggg
aaggttttaggttcattttcctcctcgtctagtcattaattaaccacctt
caggttttcacctcagtccccagcttggagaaaaacaaagaacaagaaac
tgcacccatttaattccagagctacatacagccttctttgtgatattatc
aggaaaaaaaacctaccacccccacccctacccacccacctacgcccacc
ccttccgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_41179145_41180294
seq2: B6Ng01-145P14.b_49_1177 (reverse)

seq1  TTAAGAGTCTTGATTTTACTGGGTTACCAGGAATTGTGATATGCAGCCAA  50
      |||||||||||||  ||||||||||| |||  | ||||| |||||||| |
seq2  TTAAGAGTCTTGA--TTACTGGGTTA-CAG--AATGTGA-ATGCAGCC-A  43

seq1  GAGGTTGGAGGTTCCATTTGGTTACTGGAATGTGGGATTGCCTACTACAT  100
      |||| |||||||  ||||    |||| |||||||||| ||||||||||||
seq2  GAGG-TGGAGGT--CATT---GTACT-GAATGTGGGA-TGCCTACTACAT  85

seq1  GGGTTTATGGCTGAGGAAGAATTAGCGTGGTGCCAGGGACAAGTGAACAA  150
      ||| |||| |||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTAT-GCTGAGGAAGAATTAGCGTGGTGCCAGGGACAAGTGAACAA  134

seq1  GAGCTGGGGAGCACAGCAATTGAAGTGTGGGACCACTGGTTACAGGGGAT  200
      |||||||||||||||||||||||||||| |||||||||  ||||||||| 
seq2  GAGCTGGGGAGCACAGCAATTGAAGTGT-GGACCACTG--TACAGGGGA-  180

seq1  TACAGCAGAGAGGGAACTAGTGGCTCCCGGGACAAGAGAGCCAGATGCTG  250
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TACAGCAGAGAGGGAACTAGTGGCTCCCGGGACAAAAGAGCCAGATGCTG  230

seq1  CGGGGAATCGCTGGAGAGAGTGGCGGTTCACTTTTTAATATTTCCTGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGAATCGCTGGAGAGAGTGGCGGTTCACTTTTTAATATTTCCTGCAG  280

seq1  CACAAGATTGCCTATTTTAATGTTCATTGGTTTTTTTTCACCTCAGTTTG  350
      |||||||||||||||||||||||||| ||| |||||||||||||||||||
seq2  CACAAGATTGCCTATTTTAATGTTCA-TGGGTTTTTTTCACCTCAGTTTG  329

seq1  TAAAATGAGTTTGACAGACTAGAACTATTAGCTTTTCATGTGAAACATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGAGTTTGACAGACTAGAACTATTAGCTTTTCATGTGAAACATGC  379

seq1  ATAATGTTTTAAATTTGGGGCATTTAAATATCCGCAGTTTATTTTGTACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTTTTAAATTTGGGGCATTTAAATATCCGCAGTTTATTTTGTACC  429

seq1  TTAAGAATATTTCAAATTTTAGTTAATTAAATAGTTTAACTTCTCTTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAATATTTCAAATTTTAGTTAATTAAATAGTTTAACTTCTCTTTTA  479

seq1  TCTTTATTTTCTCGGTCTTAGTTTAAATGTAATTGGTTATTTAAGATACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATTTTCTCGGTCTTAGTTTAAATGTAATTGGTTATTTAAGATACT  529

seq1  TAACATTTTTAATCATATTGAATTAATGTTAATTTATCTGTATGATTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTTTTAATCATATTGAATTAATGTTAATTTATCTGTATGATTTAA  579

seq1  GTGATAATTTTTATTTATTCTACAAGTAGTCAGCTCATTCATCATAGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAATTTTTATTTATTCTACAAGTAGTCAGCTCATTCATCATAGGTT  629

seq1  AATAGTTTATTTTTTTATCCATTGCATTGACTACATCTGAAGTAGAATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTTATTTTTTTATCCATTGCATTGACTACATCTGAAGTAGAATTT  679

seq1  TGTATATGAATTAGTTCTATTCTGGATAGTTTCATGTTTCTATGATTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATGAATTAGTTCTATTCTGGATAGTTTCATGTTTCTATGATTTGC  729

seq1  ATATTATATAACAATTTTGTGTTGACATGGTTGCAACTGCACTATTTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATATAACAATTTTGTGTTGACATGGTTGCAACTGCACTATTTTTA  779

seq1  GTAATTCTACATTTGATAAGAAAAGAAATTCATATTGTTCTGGTGCTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTCTACATTTGATAAGAAAAGAAATTCATATTGTTCTGGTGCTTCA  829

seq1  TTTATTTGACTATAGTTCAGAGTTGAATTTTTAATCTTATTCTGTCCAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTGACTATAGTTCAGAGTTGAATTTTTAATCTTATTCTGTCCAGG  879

seq1  TTTCTCAACCCTTATCAAAATTTTCAGGTATTATTTAGTGAGATACGAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAACCCTTATCAAAATTTTCAGGTATTATTTAGTGAGATACGAAT  929

seq1  TATGAACTACTGAGATTATAAGTAAAATTACTCTCTTAAGGAAAGCCCTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAACTACTGAGATTATAAGTAAAATTACTCTCTTAAGGAAAGCCCTA  979

seq1  CAGTTTATATTTCATCTTACCATGCTAAGAACTTCTAGGCCCACAAGTCT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTATATTTCATCTTACCATGCTAAGAACTTCTAGGCCCACAAGTCT  1029

seq1  TTCGTCCTAATGAATTATTAATAATCAGCTGGGTTTGGATTTTTGAGGGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTCCTAATGAATTATTAATAATCAGCTGGGTTTGGATTTTTGAGGGA  1079

seq1  CTGACTACTTTTTCCTAGTCAACTGTTGACAGTTGTTCTGCCTTGAATTC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTACTTTTTCCTAGTCAACTGTTGACAGTTGTTCTGCCTTGAATTC  1129

seq1: chr15_40995590_40996654
seq2: B6Ng01-145P14.g_69_1126

seq1  GAATTCAAAGGATTCACCCACCTAATGGTGTGTTGAAGAGGCCAGTTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGGATTCACCCACCTAATGGTGTGTTGAAGAGGCCAGTTCAG  50

seq1  GACCTTTGGAAAATGCCACCAGACCCCTCCCCTCCTGGAAGAAAAAAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTGGAAAATGCCACCAGACCCCTCCCCTCCTGGAAGAAAAAAGGT  100

seq1  CATGGAACACTTAGGCACCCCTCCCCTCCAGAAAGGAGGGGCTAATTAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAACACTTAGGCACCCCTCCCCTCCAGAAAGGAGGGGCTAATTAAC  150

seq1  ATTCCTCAGCCAAGGTGGGGCGGGAGACACTGATCAACCTCTACCTGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCAGCCAAGGTGGGGCGGGAGACACTGATCAACCTCTACCTGCAG  200

seq1  GCTGGGGAGGTCCAAAGGAGGTAAACACATTCTGTAGGACAGACCTACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGGAGGTCCAAAGGAGGTAAACACATTCTGTAGGACAGACCTACAG  250

seq1  ACAAGGCCACCTACAGACAAGGGAAGTTCTTGCCACCTCATTCCCCTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCCACCTACAGACAAGGGAAGTTCTTGCCACCTCATTCCCCTAGT  300

seq1  GACCAATCAGTTTAAAAATTACACTGTTCTGCCAATCACATTGTGACTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAATCAGTTTAAAAATTACACTGTTCTGCCAATCACATTGTGACTAA  350

seq1  TGGCTGCTGCTCCGAAAACTGTATAAAAAACTCCCTGACTGGGCTGCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCTGCTCCGAAAACTGTATAAAAAACTCCCTGACTGGGCTGCTTG  400

seq1  AGGCTGCCTCTCCTTCCGGTGCAGGATGACCCCAAACGCATTGGAACAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGCCTCTCCTTCCGGTGCAGGATGACCCCAAACGCATTGGAACAAT  450

seq1  AAATTCCTCTTGCTTTTTGCATGCTTCCCCCACTCTGAGTGGTTCAATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCTCTTGCTTTTTGCATGCTTCCCCCACTCTGAGTGGTTCAATCA  500

seq1  GGGGTCCCCAGTAAGCTAAGGCTCATCAGAGTCTTACAATGCCATCTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCCCCAGTAAGCTAAGGCTCATCAGAGTCTTACAATGCCATCTTCA  550

seq1  GATTCCAAAGTAACTAGATGTGCTGGGAGCGCAAACTTAATCCCTATTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCAAAGTAACTAGATGTGCTGGGAGCGCAAACTTAATCCCTATTCA  600

seq1  TCAAAAGTCGCTCTGTTTAATTTTGGTCGCACAAATGACATCGTTATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGTCGCTCTGTTTAATTTTGGTCGCACAAATGACATCGTTATAAA  650

seq1  TAAACCTAATATGCTATCAGTCAATTATAAATGTTCAACTATTTCATAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTAATATGCTATCAGTCAATTATAAATGTTCAACTATTTCATAAT  700

seq1  AAAATACATTTCATAGTGGTCACTATTTGTATAGCTGAAAAAAATCCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACATTTCATAGTGGTCACTATTTGTATAGCTGAAAAAAATCCATC  750

seq1  CTATTATGAAATATGGCAAAACTGATATGGGTTAATAACGTGTTGTAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||   |||
seq2  CTATTATGAAATATGGCAAAACTGATATGGGTTAATAACGTGTTTGTAAA  800

seq1  CTACTAATGGAT-AAAAACGTCTGACACTGAAGTCTACAGAAGCAGTGGG  849
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTACTAATGGATAAAAAACGTCTGACACTGAAGTCTACAGAAGCAGTGGG  850

seq1  AAGGTTTTAGGTTCATTTTCCTCCTCGTCTAGTCATTAAATTAACCACCT  899
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAGGTTTTAGGTTCATTTTCCTCCTCGTCTAGTCATT-AATTAACCACCT  899

seq1  CCAGGTTTTCACCTCAGTCCCCAGCTTGGAGGAAAAACAAAGAACAAGAA  949
       ||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCAGGTTTTCACCTCAGTCCCCAGCTTGGA-GAAAAACAAAGAACAAGAA  948

seq1  ACTGCACCCATTTAATTCCAGAAGCTACATACAGCCTTCTTTTGTTGATA  999
      ||||||||||||||||||||| ||||||||||||||||||||   |||||
seq2  ACTGCACCCATTTAATTCCAG-AGCTACATACAGCCTTCTTT--GTGATA  995

seq1  TTATCAAGGAAAAAAACCTACCACCCCCACCCCCCACCCCACCCCACCTA  1049
      |||||| | |||||||||||||||||||| |||| ||||   ||||||||
seq2  TTATCAGGAAAAAAAACCTACCACCCCCA-CCCCTACCC--ACCCACCTA  1042

seq1  CGCCCACCCCTTCCGC  1065
      ||||||||||||||||
seq2  CGCCCACCCCTTCCGC  1058