MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-146J17
Chromosome	15 (Build37)
Map Location	47,551,743 - 47,552,757
singlet/doublet	singlet
Overlap gene	Csmd3
Upstream gene	LOC100039438, LOC665130, LOC100039485, LOC100039493
Downstream gene	none
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039438 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039438
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC665130 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665130
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC100039485 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039485
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100039493 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039493
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Csmd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239420 MGI:2386403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Csmd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487116 GeneID:239420 MGI:2386403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CUB and Sushi multiple domains 3 transcript_id : NM_001081391.1

name	Csmd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487117 GeneID:239420 MGI:2386403
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA] codon_start : 1 product : CUB and Sushi multiple domains 3 protein_id : NP_001074860.1

name	LOC100039438 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039438
definition	number : 1 pseudo : _no_value

name	LOC100039438 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039438
definition	number : 2 pseudo : _no_value

name	LOC665130 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665130
definition	number : 1 pseudo : _no_value

name	LOC100039485 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039485
definition	number : 1 pseudo : _no_value

name	LOC100039485 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039485
definition	number : 2 pseudo : _no_value

name	LOC100039493 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039493
definition	number : 1 pseudo : _no_value

name	LOC100039493 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039493
definition	number : 2 pseudo : _no_value

name	LOC100039493 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039493
definition	number : 3 pseudo : _no_value

clone name	MSMg01-515N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116P10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-348M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522P14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-354H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122L11
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-146J17.b	B6Ng01-146J17.g
ACC	DH943706	DH943707
length	1,193	939
definition	DH943706\|Mus musculus domesticus DNA, BAC clone: B6Ng01-146J17, 5' end.	DH943707\|Mus musculus domesticus DNA, BAC clone: B6Ng01-146J17, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg ggattgcaggcttgtacaaccactctggagatcagtctggcggttcctca gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc atatatccagaagatgccccaactggtaagaaggacacatgctccactat gttcatagcagccttatttataatagccagaagctggaaggaacccagat gcccctcaacagaggaatggatacagaagatgtggtacatctacacaatg gagtactactcagctattaaaaagaatgaatttatgaaattcctggccaa atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc taagatacccaagatataagatacaatttcctaaacacatgaaactcaag aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggag caaaacacccttggaaggagttacagagacaaagtttggagttgagataa aaggatggaccatgtagacactaccatatccggggatccatcctataatt cagcttccaaatgctaacaccattgcatacactagcaagattatgctgaa aggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaa catagaagtggatgctcacagtcggctatgggtggattccagggccccaa tgaaggagctagagaaagtaccaaagaagctaaagggatctgcaacccta tagttggaacaaattatgaactacccagtacccctcggacctcttgactc tagctgccattggcatccaaaagatgccctatgtcggccttcactcgaaa gaaagggcctattggacaggcaactttttatttgcccagtcccgtgaacg ccaagggcctataaatgggagtggtggtgtgctgcgcgaatgc	gaattccatctgttctgctgggactcggatgagcgcttatatttttactt agccctttctgttaatttcatcatgttctgcatacttaaagtaatactca gaggatgtggaaattctgtcttcatgatttctagtgatggaggactcgct aaaacaaacaaacaaacaaacaaacaaagcaaagcaaagcaaagcaaagc aaagcaaagcaaagcaaagcaaagcaaaccaaaccaaaccaaaccaaacc aaaccaaaccaaaccaaaccaaaccaaaccaaaccaaaattcctgtttgc agagcagaaatagaataaaatcatagatgtgggtaacaagtggcctcgaa gtatagctttgtagttagtttaaatgtttttgccaagattgttataataa aatgagagtatctatgtaagttgtttattgaatttgatgtgtactaaaac caccaaaaatatttattgttagaagtaacatatacaatggaattcacata gtaataacttattatcttattatatgtgtatggatagtttgtctgcatgt atgtccgtgcatcacttttgtgtctggcacttgtagaagccagagatgtg tgagacattgtggaactgagtcatatatgcctgtaaccactatgtagtgg tactagaactgaaccatgtacttggatctgtagcaacagctctaactgct gaactttctcttcagctccgatagttttaatgttggatattaatttaact gagactcagcaatacactgttacaagaatagtagctatgatgtgctacag agtacttgttgcattgaagatctataaagactcactgatcatgatagcac agaagagcttgcagagtgtcggtatgcagatcctgactcacatgacatca cgtgatgtgcattcagtgcatcagatcatgtgagtcatc
quality values	Open. Hide. 61 41 27 30 61 61 61 31 28 61 61 47 61 61 61 61 61 32 35 61 55 61 61 61 61 61 61 36 27 17 11 28 13 28 19 15 43 52 61 61 61 61 61 61 61 61 61 59 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 59 61 59 61 59 59 59 61 61 61 61 61 59 61 61 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 59 59 61 59 61 59 59 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 55 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 61 61 61 61 61 61 55 61 61 61 61 61 61 61 55 61 61 61 61 61 55 61 61 61 61 61 61 50 49 61 50 61 61 61 55 61 61 61 61 55 61 61 55 61 61 50 61 55 61 61 61 61 50 50 55 50 55 50 61 61 61 55 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 53 47 61 61 53 47 52 61 50 47 61 61 61 61 61 61 53 50 47 43 53 50 50 29 50 61 43 61 61 61 50 53 53 53 50 61 47 37 61 50 61 53 61 50 61 53 50 53 61 61 61 61 61 61 61 61 50 50 53 61 52 61 61 61 52 48 39 47 30 50 61 61 61 61 37 46 53 61 53 53 52 61 47 61 53 61 61 61 53 52 61 61 61 45 61 61 61 39 30 47 53 43 41 61 34 45 45 52 36 36 39 36 42 57 52 43 53 47 47 47 57 53 53 53 53 47 32 50 47 39 47 30 53 45 57 38 50 53 50 53 45 42 38 52 50 33 53 50 57 53 40 53 52 53 53 53 53 45 53 28 53 53 53 53 53 53 50 45 25 17 23 47 57 53 53 24 38 53 43 53 24 53 50 36 42 42 38 25 37 40 32 46 46 42 42 34 52 37 29 53 47 37 53 53 38 39 28 17 18 36 34 38 53 53 38 45 53 53 47 25 19 37 12 45 50 45 52 31 47 53 45 31 26 41 32 38 32 10 52 41 24 26 23 30 53 28 28 41 28 42 40 14 30 29 21 29 53 13 47 19 34 20 13 16 23 32 17 31 31 38 50 50 12 17 28 28 28 38 53 34 37 40 27 38 38 40 42 31 42 34 21 23 22 28 38 42 22 50 30 40 24 27 29 57 53 40 34 31 22 32 17 40 35 19 7 27 21 30 42 8 21 29 10 19 23 17 36 22 15 10 34 31 12 40 28 42 33 20 37 23 24 31 23 40 33 40 29 29 29 25 31 12 29 10 19 30 32 20 53 25 38 33 6 12 19 33 35 23 24 29 40 30 15 32 19 11 16 20 33 33 31 31 33 40 31 16 32 32 35 20 36 33 34 30 20 30 24 13 13 12 45 14 15 19 9 8 20 32 28 27 8 9 10 15 14 22 21 27 30 47 27 27 20 34 26 12 27 29 6 29 29 26 29 19 39 34 33 18 10 14 14 30 14 38 8 25 18 29 22 32 5 8 5 7 10 8 21 10 7 5 5 5 7 8 8 43 39 37 36 13 29 35 29 17 23 16 23 36 13 18 29 14 10 26 17 31 41 21 16 28 18 31 12 10 36 15 13 23 33 13 28 19 18 21 11 15 51 25 23 12 9 10 11 11 8 18 29 51 33 28 20 23 8 10 7 9 10 10 11 26 7 7 5 4 6 5 25 12 20 14 11 8 11 24 9 30 16 7 7 22 16 16 36 14 27 8 10 10 6 9 8 8 8 10 16 21 8 14 11 7 10 7 7 12 21 11 19 15 13 9 9 17 8 10 15 14 38 12 7 8 13 12 9 5 10 9 13 7 23 12 11 25 9 6 8 7 10 11 12 4 12 16 10 6 17 24 6 5 30 34 13 6 8 30 8 25 23 8 18 24 14 10 22 13 10 28 28 11 8 22 9 7 7 17 17 26 38 34 34 30 10 12 13 6 6 14 16 9 3 3 5 3 4 1 4 3 4 14 15 7 9 18 29 4 4 18 26 8 5 8 6 9 26 5 8 14 5 25 18 12 3 3 4 14 8 4 5 5 9 21 5 4 4 6 5 6 3 1 3 5 4 4 6 3	Open. Hide. 61 61 61 59 61 45 49 38 49 30 41 37 43 41 45 61 59 59 61 61 61 61 59 49 61 61 59 61 59 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 49 55 61 61 61 49 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 47 61 61 55 61 47 61 61 61 61 61 61 61 61 61 50 50 50 47 39 50 50 50 50 50 50 50 50 61 50 50 50 50 50 50 50 50 38 50 38 42 42 47 47 50 50 47 42 47 45 47 47 42 47 45 50 47 42 47 45 50 47 42 47 47 47 47 47 47 42 28 28 23 38 21 30 46 47 47 47 46 52 52 57 53 53 47 47 47 53 57 47 43 46 43 43 43 47 47 47 47 47 33 33 47 47 47 47 46 47 41 35 35 35 41 41 38 35 41 52 52 43 33 43 41 33 43 57 41 38 41 57 57 57 57 57 57 41 38 46 57 46 41 46 57 53 53 53 38 38 41 46 46 38 41 57 53 53 57 53 53 46 39 57 57 57 57 57 41 57 37 57 57 44 57 57 57 57 44 57 57 33 33 44 57 46 46 46 37 46 46 46 46 44 44 51 51 46 41 41 39 44 46 39 41 39 26 39 43 43 46 37 46 46 46 46 46 46 46 45 46 46 34 46 46 46 39 20 30 19 46 46 51 46 39 39 34 46 46 46 34 46 37 43 29 33 39 39 24 36 39 21 26 21 30 30 26 26 26 33 46 39 46 46 46 30 29 39 41 41 39 36 36 27 27 36 44 36 44 36 27 26 36 32 36 26 16 11 14 44 25 20 26 20 30 36 32 30 24 30 32 32 32 36 39 38 29 32 25 13 6 10 19 32 32 51 36 51 33 26 36 51 27 26 30 30 30 30 11 8 10 4 6 10 19 30 35 39 39 35 31 20 15 13 16 22 7 16 29 28 29 31 44 31 31 30 25 21 19 22 29 22 22 28 29 26 29 21 19 22 26 29 31 33 31 29 25 29 31 34 29 29 29 36 29 34 25 17 11 17 24 31 29 19 30 21 29 29 26 29 29 27 25 22 24 27 27 27 22 18 7 12 17 16 16 27 21 24 22 16 11 10 17 23 20 23 27 23 21 21 20 13 16 14 19 18 16 14 24 27 27 21 17 12 22 22 23 21 12 7 5 4 2 14 16 27 26 26 27 19 16 13 15 17 17 18 21 15 8 11 8 11 11 5 4 12 17 18 18 22 21 17 16 19 21 16 14 17 21 12 7 13 5 13 19 14 22 19 22 23 18 17 22 10 17 16 8 13 18 18 19 17 10 14 19 18 19 14 13 13 13 4 3 15 15 17 18 16 13 3 14 12 15 20 19 23 18 18 18 18 16 16 18 21 24 18 18 17 21 16 27 18 18 18 18 18 20 17 17 13 14 3 11 12 6 14 16 17 18 15 21 12 13 6 3 4 18 15 14 11 19 24 6 4 4 4 5 14 6 13 13 13 19 8 9 22 17 11 6 12 6 1 5 6 3 13 13 12 14 16 11 18 12 11 22 18 21 17 10 6 8 9 11 11 18 8 6 8 8 11 14 9 8 8 6 3 5 13 19 12 17 10 23 9 16 4 1 4 14 8 16 21 5 9 6 9 18 9 18 19 13 4 7 17 18 18 8 12 7 18 4 2 8 13 3 3 1 4 1 2 1 3 3 1 1 6 11 14 6 5 4 9 17 18 7 10 4 14 18 17 5 11 18 18 16 12 5 12 17 18 7 14 7 9 3 3 7 13 5 7 12 14 5 11 3 1 9 12 19 21 3 5 5 4 6 17 7 6 4 8 13 13 8 14 5 4 8 3 5 11 18 11 5 4 8 7 18 11 13 16 15 6 8 5 5 7 12 7 12 11 4 2 2 4 3 6 6 9 4 6 18 7 5 8 3 15 6 5 14 6 11 18 9 9 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr15_47551743_47552757
seq2: B6Ng01-146J17.g_65_1003 (reverse)

seq1  GATGACTTCACACTGATCTGATTTGCCAACATTTGATTTGCACATCACGG  50
      |||||| ||||| ||||||||  |||  ||   |||  |||||||||| |
seq2  GATGAC-TCACA-TGATCTGA--TGC--AC---TGA-ATGCACATCAC-G  39

seq1  TGATGTCATGTGAGTCAGAGATTCTGACATTAACCAACAACCTCTGCATG  100
      |||||||||||||||||| || |||| |||  ||| |||  ||||||| |
seq2  TGATGTCATGTGAGTCAG-GA-TCTG-CAT--ACCGACA--CTCTGCAAG  82

seq1  CCTCTTTCTGTGCTATTCATGATTCAGTTTGTAAGTTGGTGGTGGTGGGG  150
       ||| |||||||||| |||||| |||||  ||   ||  |          
seq2  -CTC-TTCTGTGCTA-TCATGA-TCAGTGAGT--CTTTAT----------  116

seq1  GGGTCTTTCAAAAATGCAAAACAGGTTACTCTGTAAGCAACCCTTCATTA  200
       | ||||     |||||  |||| | |||||||| ||||   | ||| ||
seq2  AGATCTT----CAATGC--AACAAG-TACTCTGT-AGCA---CATCA-TA  154

seq1  GGCTTACTCTTTCTTTGTTACAGTGTATTTGCTGAGTCCTCAAGTTTTTA  250
      |   |||| ||   |||| |||||||| ||||||||| ||||     |||
seq2  G--CTACTATT--CTTGTAACAGTGTA-TTGCTGAGT-CTCA----GTTA  194

seq1  ATTAAATATTCCAACATTTAAAAAACTATTTGGGAGCTGAAGAGAAAAGT  300
      | | |||| |||||||||   |||||||  | |||||||||||| |||||
seq2  AATTAATA-TCCAACATT---AAAACTA--TCGGAGCTGAAGAG-AAAGT  237

seq1  TCAGCAGTTAAGAGCTGTTGCTACAGATCCAAAGTACCTGGGTTCAGTTC  350
      ||||||||| |||||||||||||||||||| |||||| | ||||||||| 
seq2  TCAGCAGTT-AGAGCTGTTGCTACAGATCC-AAGTACAT-GGTTCAGTT-  283

seq1  CTAGTACCACCTACATAGTGGTTTACAGGCATATATGACTCCAGTTCCAC  400
      ||||||||| ||||||||||| |||||||||||||||||| |||||||||
seq2  CTAGTACCA-CTACATAGTGG-TTACAGGCATATATGACT-CAGTTCCAC  330

seq1  AATGTCTCACACCTTCTTCTGGCTTCTACAAGTGCCAGACACAAAAGTGA  450
      |||||||||||| |   |||||||||||||||||||||||||||||||||
seq2  AATGTCTCACACAT--CTCTGGCTTCTACAAGTGCCAGACACAAAAGTGA  378

seq1  TGCACGGACATACATGCAGACAAACTATCCATACACATATAATAAGATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACGGACATACATGCAGACAAACTATCCATACACATATAATAAGATAA  428

seq1  TAAGTTATTACTATGTGAATTCCCATTGTATATGTTACCTTTCTAACAAT  550
      ||||||||||||||||||||| ||||||||||||||||  ||||||||||
seq2  TAAGTTATTACTATGTGAATT-CCATTGTATATGTTAC--TTCTAACAAT  475

seq1  AAATATTTTTGGTGGTTTTAGTACACATCAAATTTCAATAAACAACTTAC  600
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAATATTTTTGGTGGTTTTAGTACACATCAAA-TTCAATAAACAACTTAC  524

seq1  ATAGATACTCTCATTTTATTATAACAATCTTGGCAAAAACATTTAAACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATACTCTCATTTTATTATAACAATCTTGGCAAAAACATTTAAACTA  574

seq1  ACTACAAAGCTATACTTCGAGGCCACTTGTTACCCACATCTATGATTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAAAGCTATACTTCGAGGCCACTTGTTACCCACATCTATGATTTTA  624

seq1  TTCTATTTCTGCTCTGCAAACAGGAATTTTGGTTTGGTTTGGTTTGGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTTCTGCTCTGCAAACAGGAATTTTGGTTTGGTTTGGTTTGGTTT  674

seq1  GGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGCTTTGCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGCTTTGCTTT  724

seq1  GCTTTGCTTTGCTTTGCTTTGCTTTGCTTTGCTTTGCTTTGTTTGTTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGCTTTGCTTTGCTTTGCTTTGCTTTGCTTTGCTTTGTTTGTTTGT  774

seq1  TTGTTTGTTTGTTTTAGCGAGTCCTCCATCACTAGAAATCATGAAGACAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTGTTTTAGCGAGTCCTCCATCACTAGAAATCATGAAGACAG  824

seq1  AATTTCCACATCCTCTGAGTATTACTTTAAGTATGCAGAACATGATGAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCACATCCTCTGAGTATTACTTTAAGTATGCAGAACATGATGAAA  874

seq1  TTAACAGAAAGGGCTAAGTAAAAATATAAGCGCTCATCCGAGTCCCAGCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGAAAGGGCTAAGTAAAAATATAAGCGCTCATCCGAGTCCCAGCA  924

seq1  GAACAGATGGAATTC  1015
      |||||||||||||||
seq2  GAACAGATGGAATTC  939

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information