BAC Information

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BAC

Clone NameB6Ng01-148F23
Chromosome15 (Build37)
Map Location 82,648,267 - 82,649,023
singlet/doubletsinglet
Overlap geneTcf20
Upstream geneTef, LOC667073, Tob2, Phf5a, Aco2, Polr3h, Csdc2, Pmm1, EG545121, 1700029P11Rik, D15Wsu75e, Xrcc6, Nhp2l1, 4930407I10Rik, Mei1, Ccdc134, Srebf2, LOC435145, Tnfrsf13c, Cenpm, 1500009C09Rik, Sept3, Wbp2nl, Naga, C920005C14Rik, 1500032L24Rik, Ndufa6, Cyp2d22, LOC545123, Cyp2d10, Cyp2d9, EG545124, EG667196, EG667177, 9030605E09Rik, BC018285, Cyp2d13, LOC380998, LOC627860, LOC676200, 1300013D18Rik, LOC271300, Cyp2d26
Downstream geneNfam1, Serhl, 1110014J01Rik, Poldip3, Cyb5r3, A4galt, LOC100042119, Arfgap3, Pacsin2, LOC414359, Ttll1, Bik, Mcat, Tspo, Ttll12, Scube1, Mpped1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148F23.bB6Ng01-148F23.g
ACCDH945004DH945005
length1,152762
definitionDH945004|Mus musculus domesticus DNA, BAC clone: B6Ng01-148F23, 5' end.DH945005|Mus musculus domesticus DNA, BAC clone: B6Ng01-148F23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatatcaaatggctgagaaacacctaaaacaaat
gttcaacatccttaatcatcagggaaatgcaaattaaaacaaccctgaga
ttccacctcatgccaatcacagtggctaagatcaaaaactcatgtgacag
cagatactggtgaggatgcaaagaaagaggaacactcctccattgctggt
ggaattgcaagctggcacaaccactctggaaatcagtttggtggttcctc
aaaaaattggacatagtactacctgaggacccagctataccactctgggc
atatacccagaagatgctccaacatgtaataagaacacatgctccattat
gttcatagcagccttatttataatagcaagaatctagaaagaacccagat
gtccctcaataaaggaatggatacagaaaatgtggtacatttatacaatg
gagtactactcagctattaaagacaatgaatttatgaaactcttaggcaa
atggatagatctggaggatattatcctgagtgaggtaacccaatcacaaa
tgaacacacctgatatgaactcactgacaagtggatattaggccagaagc
tcagaatacccaagatacaatttacaaaccatatgaaactcaagaagaag
gaagaccaaaatgtggatacttctatccttcttagaagaatgtacaaaac
acccatggaaggagttacagagacaaagtgtggagcaaagtctgaaggga
tgatcatccagagactgccccacctggggatccatcccatatacaaccac
taaacccagacaccattgtggatgccaacaagtgcttgctgacagaagcc
tgatattgctctctcctgagatgctctgccagtgcctgacaaatacagaa
gtggatgctcacagccatccatgggactgagcacagggtccccagtgaag
agctagagaaagaaaccaaggagctgaaggggtttgcagcccatagagga
taataatatgaactaaccagtactccagagctccaggtattaaaccacca
accaagagtacacatatgggaactcatggctccagctgcatatgttagca
gagaatggcctaatccggaccatcaatgggaaaagaagagccttggttca
tg
gaattctctgtactctctgtccttacctcatcaccagggtggttgatacc
atagagaatctccctgtagcccctagcttgtgagtcttctgcctatgtcc
tgacttatgctaaaaatgaaattacagttcctgatgattcgacgatttgt
atgagaatagaaaagaggaattgtctgttaatgtgctgaaatacacagta
caatagtaactgtcaaagttaatttccaacagagtgttcagctaactcca
caggaccaatgcagaacctctttaaaaactacctgagcgggcggtggtgg
tgcacgcctttaatcccagcactcgggaggcagaggcaggcggatttctg
agttctgctgaaagtacagatgtgggcacattctgtaagacttttttagg
agatttcatctccagaagtaataatactcacattgttttatttgtgactt
tttttttctctcagaaaaagcattttctaactttaggaaacattttatta
atggactgtcacaactggtcatactgtttttgtctctgaggacaagcaaa
tgtgtctttctgatggtgtcttttgcaacagtccctataactggtggttt
tgtaaaaccttgtggcattatggtggccaagcttcacagggccatgtttg
actggggcctagagactggtggtacagagctgctggagctcaggtgagca
tagattgctttccatgagttccagttgtctgtctccctgctgttaatctc
tctggcagattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_82648267_82649023
seq2: B6Ng01-148F23.g_67_828 (reverse)

seq1  CAATCTGCCAGTGAGATTAACAGCA-GGAGACAGACAACTGGAACTCATG  49
      ||||||||||| ||||||||||||| ||||||||||||||||||||||||
seq2  CAATCTGCCAGAGAGATTAACAGCAGGGAGACAGACAACTGGAACTCATG  50

seq1  G-AAGCACTCTCTGCTCACCTGAGCTCCAGCAGCTCTGTACCACCAGTCT  98
      | ||||| ||| ||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCAATCTATGCTCACCTGAGCTCCAGCAGCTCTGTACCACCAGTCT  100

seq1  CTAGG-CCCAGTCAAACATGGCCCTGTGAAGCTTGGCCACCATAATGCCA  147
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCCCCAGTCAAACATGGCCCTGTGAAGCTTGGCCACCATAATGCCA  150

seq1  CAAGG-TTTACAAAACCACCAGTTATAGGGACTGTTGCAAAAGACACCAT  196
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTTTACAAAACCACCAGTTATAGGGACTGTTGCAAAAGACACCAT  200

seq1  CAGAAAGACACATTTGCTTGTCCTCAGAGAC-AAAACAGTATGACCAGTT  245
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CAGAAAGACACATTTGCTTGTCCTCAGAGACAAAAACAGTATGACCAGTT  250

seq1  GTGACAGTCCATTAATAAAATGTTTCCTAAAGTTAGAAAATGCTTTTTCT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGTCCATTAATAAAATGTTTCCTAAAGTTAGAAAATGCTTTTTCT  300

seq1  GAGAGAAAAAAAAAGTCACAAATAAAACAATGTGAGTATTATTACTTCTG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAAAAAAAAGTCACAAATAAAACAATGTGAGTATTATTACTTCTG  350

seq1  GAGATGAAATCTCCTAAAAAAGTCTTACAGAATGTGCCCACATCTGTACT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGAAATCTCCTAAAAAAGTCTTACAGAATGTGCCCACATCTGTACT  400

seq1  TTCAGCAGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGGAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCAGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGGAT  450

seq1  TAAAGGCGTGCACCACCACCGCCCGCTCAGGTAGTTTTTAAAGAGGTTCT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGCGTGCACCACCACCGCCCGCTCAGGTAGTTTTTAAAGAGGTTCT  500

seq1  GCATTGGTCCTGTGGAGTTAGCTGAACACTCTGTTGGAAATTAACTTTGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGGTCCTGTGGAGTTAGCTGAACACTCTGTTGGAAATTAACTTTGA  550

seq1  CAGTTACTATTGTACTGTGTATTTCAGCACATTAACAGACAATTCCTCTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTACTATTGTACTGTGTATTTCAGCACATTAACAGACAATTCCTCTT  600

seq1  TTCTATTCTCATACAAATCGTCGAATCATCAGGAACTGTAATTTCATTTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTCTCATACAAATCGTCGAATCATCAGGAACTGTAATTTCATTTT  650

seq1  TAGCATAAGTCAGGACATAGGCAGAAGACTCACAAGCTAGGGGCTACAGG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATAAGTCAGGACATAGGCAGAAGACTCACAAGCTAGGGGCTACAGG  700

seq1  GAGATTCTCTATGGTATCAACCACCCTGGTGATGAGGTAAGGACAGAGAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTCTCTATGGTATCAACCACCCTGGTGATGAGGTAAGGACAGAGAG  750

seq1  TACAGAGAATTC  757
      ||||||||||||
seq2  TACAGAGAATTC  762