MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-148J02
Chromosome	15 (Build37)
Map Location	33,900,878 - 33,901,900
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Sdc2, Pgcp, 1700084J12Rik, Tspyl5
Downstream gene	LOC675463, Mtdh, Laptm4b, Matn2, Rpl30, BC030476, Hrsp12, Pop1, Npal2, Kcns2, Stk3
Link	Open Mouse BAC browser

Click to get alignment info.

name	Sdc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15529 MGI:1349165
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pgcp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54381 MGI:1889205
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700084J12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73486 MGI:1920736
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Tspyl5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239364 MGI:2442458
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 43 ESTs, 15 Proteins

name	LOC675463 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675463
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 4 Proteins pseudo : _no_value

name	Mtdh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67154 MGI:1914404
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Laptm4b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114128 MGI:1890494
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Matn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17181 MGI:109613
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpl30 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19946 MGI:98037
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC030476 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239368 MGI:2447772
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hrsp12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15473 MGI:1095401
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pop1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67724 MGI:1914974
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Npal2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:223473 MGI:1924488
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcns2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16539 MGI:1197011
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stk3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56274 MGI:1928487
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sdc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130837 GeneID:15529 MGI:1349165
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : syndecan 2 transcript_id : NM_008304.2

name	Pgcp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130273 GeneID:54381 MGI:1889205
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : plasma glutamate carboxypeptidase transcript_id : NM_176073.3

name	Tspyl5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94398485 GeneID:239364 MGI:2442458
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 43 ESTs, 15 Proteins product : testis-specific protein, Y-encoded-like 5 transcript_id : XM_139378.7

name	Mtdh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89363043 GeneID:67154 MGI:1914404
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Metadherin transcript_id : NM_026002.4

name	Laptm4b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130826 GeneID:114128 MGI:1890494
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lysosomal-associated protein transmembrane 4B transcript_id : NM_033521.3

name	Matn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120407044 GeneID:17181 MGI:109613
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrilin 2 transcript_id : NM_016762.2

name	Rpl30 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387534 GeneID:19946 MGI:98037
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L30 transcript_id : NM_009083.3

name	BC030476 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27734135 GeneID:239368 MGI:2447772
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC030476 transcript_id : NM_173421.1

name	Hrsp12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40807497 GeneID:15473 MGI:1095401
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heat-responsive protein 12 transcript_id : NM_008287.2

name	Pop1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142359784 GeneID:67724 MGI:1914974
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae) transcript_id : NM_026340.2

name	Pop1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23097255 GeneID:67724 MGI:1914974
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae) transcript_id : NM_152894.1

name	Npal2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142379205 GeneID:223473 MGI:1924488
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NIPA-like domain containing 2 transcript_id : NM_145469.3

name	Kcns2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:73532785 GeneID:16539 MGI:1197011
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : K+ voltage-gated channel, subfamily S, 2 transcript_id : NM_181317.3

name	Stk3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118150663 GeneID:56274 MGI:1928487
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine/threonine kinase 3 (Ste20, yeast homolog) transcript_id : NM_019635.2

name	Sdc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677891 CCDS:CCDS27413.1 GeneID:15529 MGI:1349165
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008092 - cytoskeletal protein binding [Evidence IEA] codon_start : 1 note : heparan sulfate proteoglycan 1, cell surface-associated (fibroglycan) product : syndecan 2 protein_id : NP_032330.1

name	Pgcp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28570174 CCDS:CCDS27414.1 GeneID:54381 MGI:1889205
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0004180 - carboxypeptidase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : hematopoietic lineage switch 2 product : plasma glutamate carboxypeptidase protein_id : NP_788262.1

name	Tspyl5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82956772 GeneID:239364 MGI:2442458
definition	codon_start : 1 product : testis-specific protein, Y-encoded-like 5 protein_id : XP_139378.6

name	Mtdh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982233 CCDS:CCDS27415.1 GeneID:67154 MGI:1914404
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] codon_start : 1 note : metastasis adhesion protein product : LYRIC protein_id : NP_080278.3

name	Laptm4b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15743550 CCDS:CCDS27416.1 GeneID:114128 MGI:1890494
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : lysosomal-associated transmembrane protein 4 product : lysosomal-associated protein transmembrane 4B protein_id : NP_277056.1

name	Matn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120407045 GeneID:17181 MGI:109613
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IDA] codon_start : 1 product : matrilin 2 protein_id : NP_058042.2

name	Rpl30 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677783 GeneID:19946 MGI:98037
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 product : ribosomal protein L30 protein_id : NP_033109.1

name	BC030476 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734136 CCDS:CCDS27417.1 GeneID:239368 MGI:2447772
definition	codon_start : 1 product : hypothetical protein LOC239368 protein_id : NP_775597.1

name	Hrsp12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40807498 CCDS:CCDS27418.1 GeneID:15473 MGI:1095401
definition	GO_function : GO:0004519 - endonuclease activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA] codon_start : 1 product : heat-responsive protein 12 protein_id : NP_032313.2

name	Pop1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23097256 CCDS:CCDS27420.1 GeneID:67724 MGI:1914974
definition	EC_number : 3.1.26.5 GO_function : GO:0004526 - ribonuclease P activity [Evidence IEA] GO_process : GO:0006396 - RNA processing [Evidence IEA]; GO:0001682 - tRNA 5'-leader removal [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; ribonucleases P/MRP protein subunit homolog; processing of precursors 1 product : processing of precursors 1 homolog isoform 1 protein_id : NP_690854.1

name	Pop1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312814 CCDS:CCDS27419.1 GeneID:67724 MGI:1914974
definition	EC_number : 3.1.26.5 GO_function : GO:0004526 - ribonuclease P activity [Evidence IEA] GO_process : GO:0006396 - RNA processing [Evidence IEA]; GO:0001682 - tRNA 5'-leader removal [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; ribonucleases P/MRP protein subunit homolog; processing of precursors 1 product : processing of precursors 1 homolog isoform 2 protein_id : NP_080616.1

name	Npal2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059032 GeneID:223473 MGI:1924488
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : NIPA-like domain containing 2 protein_id : NP_663444.2

name	Kcns2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31044453 CCDS:CCDS27421.1 GeneID:16539 MGI:1197011
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0008076 - voltage-gated potassium channel complex [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : K+ voltage-gated channel, subfamily S, 2 protein_id : NP_851834.1

name	Stk3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118150664 GeneID:56274 MGI:1928487
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA] [Evidence ISS]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence ISS] [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence ISS]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0043065 - positive regulation of apoptosis [Evidence ISS]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007243 - protein kinase cascade [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : protein kinase homolog product : serine/threonine kinase 3 (Ste20, yeast homolog) STK3 protein_id : NP_062609.2

name	1700084J12Rik (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:73486
definition	number : 1

name	LOC675463 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149266470 GeneID:675463
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 4 Proteins product : similar to TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa pseudo : _no_value transcript_id : XR_032212.1

clone name	MSMg01-517B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123K07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-176C11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-270N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378G09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-104D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380N18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-053H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169L09
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-148J02.b	B6Ng01-148J02.g
ACC	DH945133	DH945134
length	1,016	360
definition	DH945133\|Mus musculus domesticus DNA, BAC clone: B6Ng01-148J02, 5' end.	DH945134\|Mus musculus domesticus DNA, BAC clone: B6Ng01-148J02, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcctcatttgaagtatattctgtaactttgaaacctgagatgaaag caaaagctggtttgcacaggaaggatgggtatcagacaggattgaactaa caagggacaggaatagtacgtatggttattgtttgtagttggtcacacag taggatcatagaaacaaagaaattgagcaaaactactatagatactgatc actgatggtactcattaactgtacatgctgttttagtttcttgttgctga acaaaataactgatgaaaagcaacctacatgagggaaggtttgctttgga tcacaggctgagaagaaacaagcatggcagagcaggcaggtggtaggagc aagagacagcatctatagtcaggaagcagagaggcagatgatggtgtcaa ctcacttctcccttttccttttattcagcctgggaccctattccatgcca tagcagtaccaacactcagggtgggtcttccttccttggttaagcctctt tagggaattgcctcaaagtcacacatcaatatgttttccctcaatcattc caaatccagtcaagttggcaataaagaatgaccatcacagatattaagag ccaggaccagaagatgtcttttgagtgtaaaatgatagtgtcatgattga taagacaattcttcaaggtactttttccagtgtggttaaaaggattactc tgaaccacctgtgcctaattgtcctaagcctctttgaaaacagttggcca aggagagaaaagaaagttcttgagtgtttctgagctgcaattccttgctt ataattatagataatatataattcaaaggtctgtgaagacaatgggaaaa tgtgtacatgtctctattttaaattctattcctttctttccccttcctga catgattgaaaggatcatatttcctataaagcatatgatgtctgtctctg tgaattattagccatcttaaggatcaaagctatgttgacctcttgactgc tggactcaggatcttc	aagaactcacccaccattttcgatgaggcataaagacctgggggagtaca ggcaggcctacccccaaataactcttttgcagtatgttgatgacctcctt ctagctgctccagatgaagacaattgccatttgatgacagaggccttgcg cagacaactagaccagatgggataccaggtgtctatgaagaaggcacagt tctgccaaagtgaggtaaccttgggtacatacttaagggggcagaggaca atgcctgctatcccaggccagaaaagagacaatcttcaacatccccatct ccaagacctggtatcagactcatgagttcttgagcttagtggggggagag ggggtgtttg
quality values	Open. Hide. 47 30 35 35 61 42 61 43 31 24 61 61 53 47 30 37 37 55 37 61 61 47 61 61 38 25 17 12 17 12 15 9 7 5 8 43 43 61 61 61 61 59 59 40 43 59 59 59 59 61 61 61 61 61 59 59 61 61 61 61 61 59 55 59 61 61 61 59 59 61 61 59 61 61 59 59 61 61 61 61 37 55 61 59 59 59 61 61 61 61 59 59 61 61 61 61 61 61 61 59 61 59 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 59 61 61 59 59 59 44 59 59 61 59 59 59 61 59 61 59 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 59 61 59 59 59 61 61 61 61 61 61 61 61 61 61 59 59 59 59 61 59 61 61 61 44 61 61 59 61 59 61 61 59 61 59 61 61 61 61 61 59 59 59 61 49 59 59 52 61 59 59 59 61 61 61 61 61 61 61 61 61 59 59 49 59 59 59 59 61 61 61 59 59 52 59 59 59 52 59 59 59 59 61 61 61 61 61 61 61 61 61 59 61 52 61 61 61 61 61 59 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 52 47 55 55 52 52 61 61 61 61 61 61 49 55 55 55 55 61 61 61 55 47 38 61 61 55 55 55 61 61 43 55 55 50 61 50 55 61 50 50 55 55 61 61 61 50 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 50 53 61 50 50 61 61 61 53 61 61 61 61 61 61 37 50 39 61 50 61 38 35 61 43 47 61 50 50 37 35 50 45 53 61 53 61 61 61 53 61 61 53 61 61 61 61 61 47 61 61 61 61 61 61 61 61 53 61 61 61 50 61 61 61 53 53 53 53 57 53 47 37 46 53 53 53 53 53 50 53 57 57 50 52 53 57 52 53 53 53 57 53 40 53 43 34 47 50 52 53 45 52 42 45 53 52 45 42 36 30 53 30 57 45 52 53 38 23 37 47 50 53 45 50 57 53 52 53 50 53 41 41 48 57 57 53 57 57 27 57 38 28 33 57 57 34 29 53 53 47 45 26 53 57 50 47 40 53 50 53 33 53 53 43 50 41 53 38 57 50 40 41 42 52 52 57 32 52 31 25 22 57 23 38 50 36 57 52 53 53 42 53 21 38 42 52 37 50 51 32 48 14 53 47 53 37 52 40 36 36 33 39 52 41 42 40 52 39 38 48 39 29 38 35 40 18 31 37 31 19 16 47 41 41 30 30 27 35 37 24 33 32 31 37 40 46 37 47 53 44 43 53 53 17 29 30 19 23 26 31 19 15 31 26 31 30 43 36 23 48 13 32 44 31 41 12 33 48 39 32 29 38 48 28 39 39 30 15 38 46 27 46 19 29 31 31 36 13 35 25 11 11 33 33 31 33 25 33 27 28 48 31 31 28 18 30 31 33 36 13 29 29 36 28 35 16 17 29 21 34 23 15 12 43 33 18 29 43 16 51 46 29 36 14 28 14 46 14 35 28 33 13 29 28 21 29 29 26 31 28 29 41 39 36 18 22 19 21 10 26 29 23 16 29 23 29 29 43 13 21 19 29 23 11 8 19 26 14 24 11 14 28 23 36 7 22 29 51 6 7 27 41 28 17 38 46 41 21 29 16 28 30 31 34 30 12 12 32 28 15 13 32 24 51 23 31 20 26 20 9 6 18 10 14 51 18 24 26 13 9 7 9 38 18 10 16 12 14 30 11 18 34 19 15 4 9 16 33 13 6 6 8 19 24 4 8 17 30 23 23 16 9 15 6 6 14 10 13 8 10 12 20 21 23 19 21 31 19 8 29 26 30 8 11 6 8 6 5 4 5 9 22 29 13 30 19 21 21 6 17 16 9 30 12 9 30 6 21 11 18 6 24 14 25 6 19 11 6 16 5	Open. Hide. 24 16 21 28 21 31 30 24 30 59 59 61 45 59 59 59 59 59 61 59 59 45 61 59 61 61 61 59 61 61 61 61 59 59 61 61 61 61 61 61 59 61 61 61 59 59 52 44 52 36 36 59 45 52 59 61 59 61 59 59 61 61 61 61 61 59 61 59 61 59 59 59 61 61 61 61 61 59 61 59 59 52 52 59 59 61 59 59 61 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 43 61 52 37 59 59 61 61 61 61 61 61 61 61 59 61 59 61 61 61 59 59 59 59 61 59 61 59 61 59 61 59 61 61 61 61 61 59 61 61 39 59 59 49 59 59 61 61 59 61 61 61 59 59 61 61 61 59 59 61 59 59 59 61 59 52 59 59 61 59 61 61 61 61 61 61 61 61 61 61 59 61 59 59 59 59 59 59 61 59 59 61 61 61 59 61 61 59 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 59 59 59 59 59 61 61 61 59 49 52 49 61 49 59 61 59 59 59 59 61 59 61 59 61 59 59 59 59 59 59 59 59 49 59 52 59 52 49 59 59 59 59 59 61 52 59 59 49 59 59 61 59 59 59 52 59 59 49 55 52 52 52 55 49 61 61 61 61 61 55 61 61 61 55 55 52 55 52 52 52 61 52 41 39 61 52 55 61 52 52 55 61 52 55 55 61 55 55 61 61 55 55 55 55 61 50 55 61 55 61 61 61 61 61 49 61 55 55 55 61 61 49 49 18 10 21 10

Alignment Information

BAC End 1

BAC End 2

seq1: chr15_33900878_33901900
seq2: B6Ng01-148J02.b_46_1061

seq1  GAATTCCTCATTTGAAGTATATTCTGTAAC-TGGAAACCTGAGATGAAAG  49
      |||||||||||||||||||||||||||||| | |||||||||||||||||
seq2  GAATTCCTCATTTGAAGTATATTCTGTAACTTTGAAACCTGAGATGAAAG  50

seq1  CAAAAGCTGGTTTGCACAGGAAGGATGGGTATCAGACAGGATTGAACTAA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCTGGTTTGCACAGGAAGGATGGGTATCAGACAGGATTGAACTAA  100

seq1  CAAGGGACAGGAATAGTACGTATGGTTATTGTTTGTAGTTGGTCACACAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGACAGGAATAGTACGTATGGTTATTGTTTGTAGTTGGTCACACAG  150

seq1  TAGGATCATAGAAACAAAGAAATTGAGCAAAACTACTATAGATACTGATC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATCATAGAAACAAAGAAATTGAGCAAAACTACTATAGATACTGATC  200

seq1  ACTGATGGTACTCATTAACTGTACATGCTGTTTTAGTTTCTTGTTGCTGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATGGTACTCATTAACTGTACATGCTGTTTTAGTTTCTTGTTGCTGA  250

seq1  ACAAAATAACTGATGAAAAGCAACCTACATGAGGGAAGGTTTGCTTTGGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATAACTGATGAAAAGCAACCTACATGAGGGAAGGTTTGCTTTGGA  300

seq1  TCACAGGCTGAGAAGAAACAAGCATGGCAGAGCAGGCAGGTGGTAGGAGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGCTGAGAAGAAACAAGCATGGCAGAGCAGGCAGGTGGTAGGAGC  350

seq1  AAGAGACAGCATCTATAGTCAGGAAGCAGAGAGGCAGATGATGGTGTCAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACAGCATCTATAGTCAGGAAGCAGAGAGGCAGATGATGGTGTCAA  400

seq1  CTCACTTCTCCCTTTTCCTTTTATTCAGCCTGGGACCCTATTCCATGCCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTCTCCCTTTTCCTTTTATTCAGCCTGGGACCCTATTCCATGCCA  450

seq1  TAGCAGTACCAACACTCAGGGTGGGTCTTCCTTCCTTGGTTAAGCCTCTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTACCAACACTCAGGGTGGGTCTTCCTTCCTTGGTTAAGCCTCTT  500

seq1  TAGGGAATTGCCTCAAAGTCACACATCAATATGTTTTCCCTCAATCATTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAATTGCCTCAAAGTCACACATCAATATGTTTTCCCTCAATCATTC  550

seq1  CAAATCCAGTCAAGTTGGCAATAAAGAATGACCATCACAGATATTAAGAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCCAGTCAAGTTGGCAATAAAGAATGACCATCACAGATATTAAGAG  600

seq1  CCAGGACCAGAAGATGTCTTTTGAGTGTAAAATGATAGTGTCATGATTGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACCAGAAGATGTCTTTTGAGTGTAAAATGATAGTGTCATGATTGA  650

seq1  TAAGACAATTCTTCAAGGTACTTTTTCCAGTGTGGTTAAAAGGATTACTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAATTCTTCAAGGTACTTTTTCCAGTGTGGTTAAAAGGATTACTC  700

seq1  TGAACCACCTGTGCCTAATTGTCCTAAGCCTCTTTGAAAACAGTTGGCCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCACCTGTGCCTAATTGTCCTAAGCCTCTTTGAAAACAGTTGGCCA  750

seq1  AGGAGAGAAAAGAAAGTTCTTGAGTGTTTCTGAGCTGCAATTCCTTGCTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGAAAAGAAAGTTCTTGAGTGTTTCTGAGCTGCAATTCCTTGCTT  800

seq1  ATAATTATAGATAATATATAATTCAAAGGTCTGTGAAGACAATGGGAAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTATAGATAATATATAATTCAAAGGTCTGTGAAGACAATGGGAAAA  850

seq1  TGTGGTACATGTCTCTATTTTAAATTCTATTTCCTTTCTTTTCCCCTTCC  899
      ||| ||||||||||||||||||||||||| |||||||| |||||||||||
seq2  TGT-GTACATGTCTCTATTTTAAATTCTA-TTCCTTTC-TTTCCCCTTCC  897

seq1  TGACATGATTGAAAGGATCATTATTTCCTTATAAAGCATATGATGTCTGT  949
      |||||||||||||||||||| ||||||| |||||||||||||||||||||
seq2  TGACATGATTGAAAGGATCA-TATTTCC-TATAAAGCATATGATGTCTGT  945

seq1  CTTCTGGTGAATTATTAG-CATCTTAAGGATCAAAGCCTATGTGACCCTC  998
      | ||| |||||||||||| ||||||||||||||||| ||||||   ||||
seq2  C-TCT-GTGAATTATTAGCCATCTTAAGGATCAAAG-CTATGTTGACCTC  992

seq1  TTTGACTGCTGGACTCAGGCTCTTC  1023
       |||||||||||||||||| |||||
seq2  -TTGACTGCTGGACTCAGGATCTTC  1016

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information