BAC Information

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BAC

Clone NameB6Ng01-148L08
Chromosome15 (Build37)
Map Location 68,616,564 - 68,790,701
singlet/doubletdoublet
Overlap geneEG633752, Khdrbs3
Upstream geneZfat1, LOC100041000, EG665945
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148L08.bB6Ng01-148L08.g
ACCDH945241DH945242
length1,1241,197
definitionDH945241|Mus musculus domesticus DNA, BAC clone: B6Ng01-148L08, 5' end.DH945242|Mus musculus domesticus DNA, BAC clone: B6Ng01-148L08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,789,568 - 68,790,701)(68,616,564 - 68,617,779)
sequence
gaattcttgcagaaagcaaaccctcacagaccctggaagcctggacagca
cctcaacaactcatgacaaagaagagaaaaggcagaggatctctgagttc
gtagccagcctggtctacagagtgagttccaggacagctaggactacaca
gagaaagcctgtctcaataattatagggtttcaaaaaagaaaaaaaacaa
aacaaaatgatgatgatgatgatgatgatgatgatgatattttaaaggaa
aaggccatacagggagaaagctgctgaagtcataagacaacatcttccta
taagaaacccccttccttttttttttttcaattttatatctttactttta
ttgtatggctgttttaccttgcatgtatgtctagtcaccatgtgtgtgcc
tgatctcttgaagaggtcagcatagggtattccctggaatactaagcagt
gtatcgtggtttgacagctaaatggattttctgaaggcccaagagatgct
cagaggcacaggaagagtcagcatccaaacccaactgcactccaaacttt
gtcatgagtgcagtgcgcaactgcactccaaagggcagtcagccttgtaa
actaatgaacccggctttgtactcatcatggtctcaacagcaatggtggt
ggtcctaacctttctgttactcctccaggagacagatctgggtggctctt
ccatctaagctcactttagagtcctgagcagcaggaagcaactgaaaaaa
cacagaagtgctgtgatgtggtgccagtcacacaaagctttctgatgcca
atgactgccacaatgccagcctctgccttcctgcctctgagagccagcag
cgtgcatctagcaacctggccagtgacatgttgctaagaacaagcccgac
tggtctgacagccacaaggagtccaaggaaggatcactatggcggacccc
actaaccagcggactctgtgagagacacacgggttcccagcacttagatt
gcagtgctttattatttagaacatagcaccacggtatgtgaaatttaggt
aggaataccaggtgtcatgttacttgaacctccaggtttttacccaactt
gatacttaccgaaaggatctgctc
gaattcagaattaaagaatatctagtagttataagaatggttgtataggg
ctggtcagaagacaggagcagacaagaagacccagatattggggacagac
gaaaggagcatccaaaatcttgaaaaattctaggaattgaaatttgagac
agaaatcaaagaaatgagatttgaagctagaaatgagaccaggatcccat
tagataataggtcagtctaaaagacaggcaggaagatgtcaattggacac
taatgctggttattttgaggtggtagctgtaatcttcacaactacaatgc
cactacattattcaaactcttgatgtctagatgaggcttaggaaggtagt
taacactatgatctaatttataagatttcaccaagctgaaaatagaacta
tgattgttttatttctagtaaactgattttccagtgtcttagtcattatg
agaaagggttattatgccctgtgaaatacatttagaaatgtttgaagcag
tttgttgttgttgctgctgctgtcacactgatatttagaaggtagaagcc
aaggatgcgtctaaacatcctcagtgtacagaataacccccacagagaat
caacccacttgccaactgcactgatggagaaacctgggtctccactgctg
atgtcacaagcaatgcactttgaagtaaatgtttttgttttttaaagtta
acgttttattccttttcaaacattcagcttatgcccagtttcaagtacca
tgttacactgctgttttggctctgatgataacagagttgcataagactgg
aaatcctgccacctcagaatttacattgtatgtgaagaccatcagtgaat
atgtcaagccagacagaggatgatgtacacagtatacaaagccattaaac
tttctgggattatctaataggagagaatcaatgaagcagggacaagattg
tccctctaaagctttgacacttgaaaaataagaatcaggaatgctggact
agggagatggcttaattatgaaaatgctggttactcggccctgaagacct
gagaagactaccgccatcatggtaaaagcttgctgatcccactggaatct
caagactgacgtttgagttgctgttgcactggtagatcccggtaaatcat
aattccagaaatcatttcctagcagcctggccactgatgagctcagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_68789568_68790701
seq2: B6Ng01-148L08.b_45_1168 (reverse)

seq1  GAGCAGATTCTTTCTGGGTAAGTATCAAGGTTTGGGT-AAAACCTGGAGA  49
      |||||||| |||||  |||||||||||||  |||||| ||||||||||| 
seq2  GAGCAGATCCTTTC--GGTAAGTATCAAG--TTGGGTAAAAACCTGGAGG  46

seq1  TTCAAGTAACCATGACTACCTTGGTAATTCTTTACTTAATATCCACATAC  99
      ||||||||| |||||| ||| ||||| | |  ||| |||  | |||||||
seq2  TTCAAGTAA-CATGAC-ACC-TGGTATTCC--TACCTAAATTTCACATAC  91

seq1  CGTGGTGCTTATGTTTCTAAATAATAAAGCACTGCAATCTAAGTGCCTGG  149
      |||||||| |||| ||||||||||||||||||||||||||||||| ||||
seq2  CGTGGTGC-TATG-TTCTAAATAATAAAGCACTGCAATCTAAGTG-CTGG  138

seq1  GAA-CCGTGTGTTCTCTCACAGAGTCCGCTGGTTAGTGGGGTCCGCCTTA  198
      ||| ||||||| ||||||||||||||||||||||||||||||||||| ||
seq2  GAACCCGTGTG-TCTCTCACAGAGTCCGCTGGTTAGTGGGGTCCGCCATA  187

seq1  GTGATCCTTCCTTGGACTCCTTGTGGCTGTCAGACCAGTCGGGCTTGTTC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCCTTCCTTGGACTCCTTGTGGCTGTCAGACCAGTCGGGCTTGTTC  237

seq1  TTAGCAACATGTCACTGGCCAGGTTGCTAGATGCACGCTGCTGGCTCTCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAACATGTCACTGGCCAGGTTGCTAGATGCACGCTGCTGGCTCTCA  287

seq1  GAGGCAGGAAGGCAGAGGCTGGCATTGTGGCAGTCATTGGCATCAG-AAG  347
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GAGGCAGGAAGGCAGAGGCTGGCATTGTGGCAGTCATTGGCATCAGAAAG  337

seq1  CTTTGTGTGACTGGCACCACATCACAGCACTTCTGTGTTTTTTCAGTTGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGTGACTGGCACCACATCACAGCACTTCTGTGTTTTTTCAGTTGC  387

seq1  TTCCTGCTGCTCAGGACTCTAAAGTGAGCTTAGATGGAAGAGCCACCCAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCTGCTCAGGACTCTAAAGTGAGCTTAGATGGAAGAGCCACCCAG  437

seq1  ATCTGTCTCCTGGAGGAGTAACAGAAAGGTTAGGACCACCACCATTGCTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTCTCCTGGAGGAGTAACAGAAAGGTTAGGACCACCACCATTGCTG  487

seq1  TTGAGACCATGATGAGTACAAAGCCGGGTTCATTAGTTTACAAGGCTGAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGACCATGATGAGTACAAAGCCGGGTTCATTAGTTTACAAGGCTGAC  537

seq1  TGCCCTTTGGAGTGCAGTTGCGCACTGCACTCATGACAAAGTTTGGAGTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTTTGGAGTGCAGTTGCGCACTGCACTCATGACAAAGTTTGGAGTG  587

seq1  CAGTTGGGTTTGGATGCTGACTCTTCCTGTGCCTCTGAGCATCTCTTGGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGGGTTTGGATGCTGACTCTTCCTGTGCCTCTGAGCATCTCTTGGG  637

seq1  CCTTCAGAAAATCCATTTAGCTGTCAAACCACGATACACTGCTTAGTATT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGAAAATCCATTTAGCTGTCAAACCACGATACACTGCTTAGTATT  687

seq1  CCAGGGAATACCCTATGCTGACCTCTTCAAGAGATCAGGCACACACATGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGAATACCCTATGCTGACCTCTTCAAGAGATCAGGCACACACATGG  737

seq1  TGACTAGACATACATGCAAGGTAAAACAGCCATACAATAAAAGTAAAGAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAGACATACATGCAAGGTAAAACAGCCATACAATAAAAGTAAAGAT  787

seq1  ATAAAATTGAAAAAAAAAAAAGGAAGGGGGTTTCTTATAGGAAGATGTTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATTGAAAAAAAAAAAAGGAAGGGGGTTTCTTATAGGAAGATGTTG  837

seq1  TCTTATGACTTCAGCAGCTTTCTCCCTGTATGGCCTTTTCCTTTAAAATA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATGACTTCAGCAGCTTTCTCCCTGTATGGCCTTTTCCTTTAAAATA  887

seq1  TCATCATCATCATCATCATCATCATCATCATTTTGTTTTGTTTTTTTTCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCATCATCATCATCATCATCATCATCATTTTGTTTTGTTTTTTTTCT  937

seq1  TTTTTGAAACCCTATAATTATTGAGACAGGCTTTCTCTGTGTAGTCCTAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAAACCCTATAATTATTGAGACAGGCTTTCTCTGTGTAGTCCTAG  987

seq1  CTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCTACGAACTCAGAGATC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCTACGAACTCAGAGATC  1037

seq1  CTCTGCCTTTTCTCTTCTTTGTCATGAGTTGTTGAGGTGCTGTCCAGGCT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCTTTTCTCTTCTTTGTCATGAGTTGTTGAGGTGCTGTCCAGGCT  1087

seq1  TCCAGGGTCTGTGAGGGTTTGCTTTCTGCAAGAATTC  1134
      |||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGTCTGTGAGGGTTTGCTTTCTGCAAGAATTC  1124

seq1: chr15_68616564_68617779
seq2: B6Ng01-148L08.g_68_1264

seq1  GAATTCAGAATTAAAGAATATCTAGTAGTTATAAGAATGGTTGTATAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAATTAAAGAATATCTAGTAGTTATAAGAATGGTTGTATAGGG  50

seq1  CTGGTCAGAAGACAGGAGCAGACAAGAAGACCCAGATATTGGGGACAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCAGAAGACAGGAGCAGACAAGAAGACCCAGATATTGGGGACAGAC  100

seq1  GAAAGGAGCATCCAAAATCTTGAAAAATTCTAGGAATTGAAATTTGAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAGCATCCAAAATCTTGAAAAATTCTAGGAATTGAAATTTGAGAC  150

seq1  AGAAATCAAAGAAATGAGATTTGAAGCTAGAAATGAGACCAGGATCCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCAAAGAAATGAGATTTGAAGCTAGAAATGAGACCAGGATCCCAT  200

seq1  TAGATAATAGGTCAGTCTAAAAGACAGGCAGGAAGATGTCAATTGGACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAATAGGTCAGTCTAAAAGACAGGCAGGAAGATGTCAATTGGACAC  250

seq1  TAATGCTGGTTATTTTGAGGTGGTAGCTGTAATCTTCACAACTACAATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCTGGTTATTTTGAGGTGGTAGCTGTAATCTTCACAACTACAATGC  300

seq1  CACTACATTATTCAAACTCTTGATGTCTAGATGAGGCTTAGGAAGGTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACATTATTCAAACTCTTGATGTCTAGATGAGGCTTAGGAAGGTAGT  350

seq1  TAACACTATGATCTAATTTATAAGATTTCACCAAGCTGAAAATAGAACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACTATGATCTAATTTATAAGATTTCACCAAGCTGAAAATAGAACTA  400

seq1  TGATTGTTTTATTTCTAGTAAACTGATTTTCCAGTGTCTTAGTCATTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGTTTTATTTCTAGTAAACTGATTTTCCAGTGTCTTAGTCATTATG  450

seq1  AGAAAGGGTTATTATGCCCTGTGAAATACATTTAGAAATGTTTGAAGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGGTTATTATGCCCTGTGAAATACATTTAGAAATGTTTGAAGCAG  500

seq1  TTTGTTGTTGTTGCTGCTGCTGTCACACTGATATTTAGAAGGTAGAAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGTTGTTGCTGCTGCTGTCACACTGATATTTAGAAGGTAGAAGCC  550

seq1  AAGGATGCGTCTAAACATCCTCAGTGTACAGAATAACCCCCACAGAGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATGCGTCTAAACATCCTCAGTGTACAGAATAACCCCCACAGAGAAT  600

seq1  CAACCCACTTGCCAACTGCACTGATGGAGAAACCTGGGTCTCCACTGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCACTTGCCAACTGCACTGATGGAGAAACCTGGGTCTCCACTGCTG  650

seq1  ATGTCACAAGCAATGCACTTTGAAGTAAATGTTTTTGTTTTTTAAAGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACAAGCAATGCACTTTGAAGTAAATGTTTTTGTTTTTTAAAGTTA  700

seq1  ACGTTTTATTCCTTTTCAAACATTCAGCTTATGCCCAGTTTCAAGTACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTTTATTCCTTTTCAAACATTCAGCTTATGCCCAGTTTCAAGTACCA  750

seq1  TGTTACACTGCTGTTTTGGCTCTGATGATAACAGAGTTGCATAAGACTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACACTGCTGTTTTGGCTCTGATGATAACAGAGTTGCATAAGACTGG  800

seq1  AAATCCTGCCACCTCAGAATTTACATTGTAATGTGAAGACCATCAGTGAA  850
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AAATCCTGCCACCTCAGAATTTACATTGT-ATGTGAAGACCATCAGTGAA  849

seq1  TATGTCAAGCCAGACAGAGGATGATGTACACAGTATACAAAGCCATTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCAAGCCAGACAGAGGATGATGTACACAGTATACAAAGCCATTAAA  899

seq1  CTTTCTGGGATTATCTAATAGTAGAGAATCAATGAAGCAGGGACAAGATT  950
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTTTCTGGGATTATCTAATAGGAGAGAATCAATGAAGCAGGGACAAGATT  949

seq1  GTCCCTCTAAAGCTTTGACACTTG-AAAATAAGAATCAGGAATGCTGGAC  999
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTCCCTCTAAAGCTTTGACACTTGAAAAATAAGAATCAGGAATGCTGGAC  999

seq1  TAGGGGAGATGGCTTAATTATGAAAATGCTGGTTACTCGAGCCTGAAGAC  1049
      || ||||||||||||||||||||||||||||||||||||  |||||||||
seq2  TA-GGGAGATGGCTTAATTATGAAAATGCTGGTTACTCGGCCCTGAAGAC  1048

seq1  CTGAGAAGGACTACCAGCATCAGTGTAAAAGCTATGCATGATCCACATCT  1099
      ||||||| |||||||  |||||  ||||||||| ||| |||||| || ||
seq2  CTGAGAA-GACTACCGCCATCATGGTAAAAGCT-TGC-TGATCC-CA-CT  1093

seq1  GGAATCTCAGGACTGACGTATGGAGGTTGCATGTGCACCTGGGTAGAGTC  1149
      ||||||||| ||||||||| ||   |||||   |||||   ||||||  |
seq2  GGAATCTCAAGACTGACGTTTG--AGTTGCTGTTGCAC--TGGTAGATCC  1139

seq1  CGGTAGAGTCCAGTAGATTCCAGGAATTCATTTTCTAGCCAGCCTTGTCT  1199
      ||||| | ||   || |||||| ||| |||||| |||| |||||| | | 
seq2  CGGTA-AATC--ATA-ATTCCA-GAAATCATTTCCTAG-CAGCCTGGCC-  1182

seq1  AACTGATGAGCTTCAGG  1216
       |||||||||| |||||
seq2  -ACTGATGAGC-TCAGG  1197