BAC Information

Click to search

BAC

Clone NameB6Ng01-149F09
Chromosome15 (Build37)
Map Location 45,124,586 - 45,125,171
singlet/doubletsinglet
Overlap genenone
Upstream geneNudcd1, Eny2, Pkhd1l1, Ebag9, 5730410E15Rik, A930017M01Rik, EG432950, Kcnv1
Downstream geneLOC100039389, EG432951
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149F09.bB6Ng01-149F09.g
ACCDH945701DH945702
length1,2091,001
definitionDH945701|Mus musculus domesticus DNA, BAC clone: B6Ng01-149F09, 5' end.DH945702|Mus musculus domesticus DNA, BAC clone: B6Ng01-149F09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttggtttacccattaaaaaatggggtacaaagctaaacaaagaa
ttctcaattgaggaatactgaagggctgagaagcacttgaaaaaatgttc
agcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagattcc
acctcacaccactcagaatggctaggatcaaaaattcaggtgacagcaaa
tgctggcacaaatgtagagaaagaggatcactcctccattgctggtgaga
ttgcaagctggtacaaccactctggaaatcagtctggccgttcagcagaa
aactggacatagcactactagacccagcaatacatttcctgggcatatac
ccagaagatgttccaattggtaatagggacacatgctccactatgttcat
agcagccttatttataatagccagaagctggaaagaacccagatacccct
caacagaggaatggatatagaaaatgtggtacatttacacaatggagttc
tactcagctattaaaaacaatgaatttatgaaattcttgggcaaatggat
gtatctggaggatatcatcctgagtgaggtaacccaatcacaaaagaagt
cacttgatgtgcactcactgataagtggatattagccccgaaacctagaa
tacccaagatacaacttccaaaacaaaagaaaatcaagaaggaagactaa
cgcgttgatacttcattcctccctagaatagggaataaaatatccatgga
aggagttgcagaaacaaagtttggagctaagacgaaaggatagaccattc
agagactgtcccatccaggggtctatcccataatcagccaccaaacacag
acactattgcatacactagcaagattttactgaagggaccctgataaaag
ctgtctccttgtgaggctttcccagtgcctggcaaatacagaagtggatg
ctcatagtcatatatagaatggaacacagggcccccatatagaagttata
gaaagtaccgtacccagagctgaaggtcttgcaaccctattggtggaaca
acaataaaaactaatcagtactccacaaagctttgtgtctctagctgcat
attaacaaaaataggcctaataagccatcattggaagaaggcctgtctgc
aacttaatatcctatcaaggagcgccagggccaaatgtggtatgagatgg
gtaagtgaa
gaattcagaataaaaatctagataacagaattgttaaaaggttttctgaa
attcttgttctttacaaggaaataattcagctttgtgcaccttcttcacc
agaggaaatttaggctcctgggaggcctctgatcctgagagtcaggtgag
agcaccatcttgtatcccgggcctctcagagaccagtatgcacaggaaag
catgcaggctgcagaagcaacagagcttcttggacagggtcccttcgggc
tttcatcttcagacaggaggcagagctgatcctcagacctctgtgcacct
tccccaccagaggagagcttgcctgaagaacatgctctgacacctgggaa
tcaggattcccaggagtgctgacagaggctaatagaatcacaagaggaac
aagctccagtcagagacagctgaacatctaacctcagagattatcagatg
gtgaaaggcaaatgtaagaatcttactaacagaaaccaagaccactcagc
atcatcagaacccagtactcccaccacagggagtcgtggatacaccaaca
cactggaaaagcaagattcagatttaaaatcatatctcatgatgctggta
gattttaggaagggcattactatttcacttaaagaaatacaggagaacac
tgatacacaggtagaagtccttaaagaggaagcacaaaaatcacttaagg
aattacaggaaaactcaaccaaacaggtaaagcaattgaacaaaaccata
caagatctaaaaatggaagtagaaacaaacaaacaaacaaacaacaaaca
caacacacaacaaaacccaaaacccaaaggaagacaactctggagataga
aatcctaacaagaaatcaggaaccatagaagcaagcatcaccaacagaat
aaaggagatggaagagagaatctcagttgcagaagattacatataaaaca
tgactcagcaatcaaagaaatgcaaaagatcttactgaaacatccaggaa
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_45124586_45125171
seq2: B6Ng01-149F09.g_69_654

seq1  GAATTCAGAATAAAAATCTAGATAACAGAATTGTTAAAAGGTTTTCTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAATAAAAATCTAGATAACAGAATTGTTAAAAGGTTTTCTGAA  50

seq1  ATTCTTGTTCTTTACAAGGAAATAATTCAGCTTTGTGCACCTTCTTCACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGTTCTTTACAAGGAAATAATTCAGCTTTGTGCACCTTCTTCACC  100

seq1  AGAGGAAATTTAGGCTCCTGGGAGGCCTCTGATCCTGAGAGTCAGGTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAATTTAGGCTCCTGGGAGGCCTCTGATCCTGAGAGTCAGGTGAG  150

seq1  AGCACCATCTTGTATCCCGGGCCTCTCAGAGACCAGTATGCACAGGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCATCTTGTATCCCGGGCCTCTCAGAGACCAGTATGCACAGGAAAG  200

seq1  CATGCAGGCTGCAGAAGCAACAGAGCTTCTTGGACAGGGTCCCTTCGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGGCTGCAGAAGCAACAGAGCTTCTTGGACAGGGTCCCTTCGGGC  250

seq1  TTTCATCTTCAGACAGGAGGCAGAGCTGATCCTCAGACCTCTGTGCACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCTTCAGACAGGAGGCAGAGCTGATCCTCAGACCTCTGTGCACCT  300

seq1  TCCCCACCAGAGGAGAGCTTGCCTGAAGAACATGCTCTGACACCTGGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCACCAGAGGAGAGCTTGCCTGAAGAACATGCTCTGACACCTGGGAA  350

seq1  TCAGGATTCCCAGGAGTGCTGACAGAGGCTAATAGAATCACAAGAGGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATTCCCAGGAGTGCTGACAGAGGCTAATAGAATCACAAGAGGAAC  400

seq1  AAGCTCCAGTCAGAGACAGCTGAACATCTAACCTCAGAGATTATCAGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCCAGTCAGAGACAGCTGAACATCTAACCTCAGAGATTATCAGATG  450

seq1  GTGAAAGGCAAATGTAAGAATCTTACTAACAGAAACCAAGACCACTCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAGGCAAATGTAAGAATCTTACTAACAGAAACCAAGACCACTCAGC  500

seq1  ATCATCAGAACCCAGTACTCCCACCACAGGGAGTCGTGGATACACCAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCAGAACCCAGTACTCCCACCACAGGGAGTCGTGGATACACCAACA  550

seq1  CACTGGAAAAGCAAGATTCAGATTTAAAATCATATC  586
      ||||||||||||||||||||||||||||||||||||
seq2  CACTGGAAAAGCAAGATTCAGATTTAAAATCATATC  586