BAC Information

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BAC

Clone NameB6Ng01-151D13
Chromosome15 (Build37)
Map Location 53,315,189 - 53,394,744
singlet/doubletdoublet
Overlap geneSamd12
Upstream geneLOC100039748, Thrap6, LOC100039745, Ext1
Downstream geneEG665097, EG621631, Tnfrsf11b, LOC665280, EG383032, Colec10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151D13.bB6Ng01-151D13.g
ACCDH947102DH947103
length1,0101,131
definitionDH947102|Mus musculus domesticus DNA, BAC clone: B6Ng01-151D13, 5' end.DH947103|Mus musculus domesticus DNA, BAC clone: B6Ng01-151D13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(53,393,750 - 53,394,744)(53,315,189 - 53,316,332)
sequence
gaattctctattccattccctggagactgtgattaataagtgactttgca
tgtctttctttttccacttcctgtttttctccctaaaagaaaaaaaaaaa
acctattcactaaacggtgggtataaacaggatgggaaaacctgagtatc
ctaggctatttaggagctgatccaagcacttctgctatttttctcacaca
cattcattagacctgacttgcctatagaccaggatggcactctcttcttc
tggacagccaaagaatagcactgtaacagtactgaacagggcctgtagag
tggtgaagaacataggtgctcttccagaggccctcgattcaattctcagc
acccacatggcagcttaaaactgcctgtaacttccagttccaggggatct
gacatcctcctgcagatatacatgcaggcaaaacaccaataaataatatc
aataaatgaattaatttttaaaagaaagaggattgaaaaaaaggaagaag
tgatgaagagtgggcagtgtggtgtgctagcctaacacaggagttctcag
ggagtacaccccaactctcagaacatcccatatcagttattcttcatatc
aaatgtttacattactcattattatagcagcaacactacagttattaagt
agcaacaaaattaattttagggttggggtgaatcaccaaaatgtgaggaa
ttgtattaaggggttgcagcatcacagtcatctataggatggaacgcagg
gcccccaatataggagctagagaatgtacccaagagctgaaggggtctgc
aaccctataggtggaacaacaatatgaactaaccagtaccccccagagct
cgtgtctctagctgcatatgtagcagaagatggcctagttggccatcatt
gggaagagaagacccttggttctagcaaactttatatgcccagtacaggg
gaaagcaggccagaagtgggagtgagtgggtagggagcaggtcgggagta
tagggacttt
gaattccatacaaacaccagttgtttcatttctttaaaggtacagtactc
ataaatttataattctcccccatgactggctggctaatgactctgcttat
ttcctgaagacaagaccttgtagtaacagaccaggtcaaagagtaggaca
aagaacaatggggaaaggggaagacagaagtcagacagggtcagtcctca
gataagaggttaagaggttaatttctctggatcctttttttaaaaaaaat
taaatactacaatcaagttagacgaattcaatttctctacatgggaaaat
atgtttcttatttctattataaagttaactaatagtcaaatccctctatt
tcaaaatttcagttctggcaatttcaataatctaagactgctgttggaaa
accctagcatctgaaggacaagtctggtacaccatctgcattggaagtaa
agttttattgaaacacagctgcatgcatctgtttaagtattgcctacagc
cactttgaaattacaatggaagagttaaatattggtacagaaactttggc
tcttaagcttgaagttactgtctgcttctttataaatcagtgtgcagacc
tctgataaaactcaacctaacgctggcagtaaatgcgttagtgagaaaac
tttaagaatctggaaaagtacaagggaaacagttgtcatgcttttaagta
caaccatttcttcttcactcagcagttctgtgacgcaaagtagcaagaca
gaaatggctaggaacaacaggcagtgccacctagtagtagctgatagtca
tttggacaactgggaataaaaagggatagtctgtgtccagtttgcacagg
ctcaccatactgtaaagaatacgagctagaaattattatagaattaatgc
gtgtaatgatagaattatgagagatttatttggggtttaaaggagtaagt
ttcaacaatctggaaactcacccttggagctattctcatatttctgatga
gtatcgtgatgtgtcactgtgatgcagacagagtgtgtgatgtgcatatg
tcacgcatccactagcgactttcacgtagcctttggctgtctgtgtcaca
ttttctctctttaagcctcttttcctagttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_53393750_53394744
seq2: B6Ng01-151D13.b_47_1037 (reverse)

seq1  CCTGCTCCCCTACCCACTCACTCCCACTTCTTGGCCCTGGCTTTCCCCTG  50
      |||||| ||||||||||||||||||||||| |||||   |||||||||||
seq2  CCTGCT-CCCTACCCACTCACTCCCACTTC-TGGCC--TGCTTTCCCCTG  46

seq1  TACTGGGGCATATAAAGTTTGCTAG-ACCAAGGGTCTTCTCTTCCCAATG  99
      |||| |||||||||||||||||||| ||||||||||||||||||||||||
seq2  TACT-GGGCATATAAAGTTTGCTAGAACCAAGGGTCTTCTCTTCCCAATG  95

seq1  ATGGCCAACTAGGCCATCTTCTGCTACATATGCAGCTAGAGACACGAGCT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCAACTAGGCCATCTTCTGCTACATATGCAGCTAGAGACACGAGCT  145

seq1  CTGGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAG  195

seq1  ACCCCTTCAGCTCTTGGGTACATTCTCTAGCTCCTATATTGGGGGCCCTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTTCAGCTCTTGGGTACATTCTCTAGCTCCTATATTGGGGGCCCTG  245

seq1  CGTTCCATCCTATAGATGACTGTGATGCTGCAACCCCTTAATACAATTCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCCATCCTATAGATGACTGTGATGCTGCAACCCCTTAATACAATTCC  295

seq1  TCACATTTTGGTGATTCACCCCAACCCTAAAATTAATTTTGTTGCTACTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTTTGGTGATTCACCCCAACCCTAAAATTAATTTTGTTGCTACTT  345

seq1  AATAACTGTAGTGTTGCTGCTATAATAATGAGTAATGTAAACATTTGATA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTGTAGTGTTGCTGCTATAATAATGAGTAATGTAAACATTTGATA  395

seq1  TGAAGAATAACTGATATGGGATGTTCTGAGAGTTGGGGTGTACTCCCTGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAATAACTGATATGGGATGTTCTGAGAGTTGGGGTGTACTCCCTGA  445

seq1  GAACTCCTGTGTTAGGCTAGCACACCACACTGCCCACTCTTCATCACTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCCTGTGTTAGGCTAGCACACCACACTGCCCACTCTTCATCACTTC  495

seq1  TTCCTTTTTTTCAATCCTCTTTCTTTTAAAAATTAATTCATTTATTGATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTTTTCAATCCTCTTTCTTTTAAAAATTAATTCATTTATTGATA  545

seq1  TTATTTATTGGTGTTTTGCCTGCATGTATATCTGCAGGAGGATGTCAGAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTGGTGTTTTGCCTGCATGTATATCTGCAGGAGGATGTCAGAT  595

seq1  CCCCTGGAACTGGAAGTTACAGGCAGTTTTAAGCTGCCATGTGGGTGCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGGAACTGGAAGTTACAGGCAGTTTTAAGCTGCCATGTGGGTGCTG  645

seq1  AGAATTGAATCGAGGGCCTCTGGAAGAGCACCTATGTTCTTCACCACTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGAATCGAGGGCCTCTGGAAGAGCACCTATGTTCTTCACCACTCT  695

seq1  ACAGGCCCTGTTCAGTACTGTTACAGTGCTATTCTTTGGCTGTCCAGAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCCCTGTTCAGTACTGTTACAGTGCTATTCTTTGGCTGTCCAGAAG  745

seq1  AAGAGAGTGCCATCCTGGTCTATAGGCAAGTCAGGTCTAATGAATGTGTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGTGCCATCCTGGTCTATAGGCAAGTCAGGTCTAATGAATGTGTG  795

seq1  TGAGAAAAATAGCAGAAGTGCTTGGATCAGCTCCTAAATAGCCTAGGATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAAATAGCAGAAGTGCTTGGATCAGCTCCTAAATAGCCTAGGATA  845

seq1  CTCAGGTTTTCCCATCCTGTTTATACCCACCGTTTAGTGAATAGGTTTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTTTTCCCATCCTGTTTATACCCACCGTTTAGTGAATAGGTTTTT  895

seq1  TTTTTTTCTTTTAGGGAGAAAAACAGGAAGTGGAAAAAGAAAGACATGCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCTTTTAGGGAGAAAAACAGGAAGTGGAAAAAGAAAGACATGCA  945

seq1  AAGTCACTTATTAATCACAGTCTCCAGGGAATGGAATAGAGAATTC  995
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACTTATTAATCACAGTCTCCAGGGAATGGAATAGAGAATTC  991

seq1: chr15_53315189_53316332
seq2: B6Ng01-151D13.g_67_1197

seq1  GAATTCCATACAAACACCAGTTGTTTCATTTCTTTAAAGGTACAGTACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATACAAACACCAGTTGTTTCATTTCTTTAAAGGTACAGTACTC  50

seq1  ATAAATTTATAATTCTCCCCCATGACTGGCTGGCTAATGACTCTGCTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTTATAATTCTCCCCCATGACTGGCTGGCTAATGACTCTGCTTAT  100

seq1  TTCCTGAAGACAAGACCTTGTAGTAACAGACCAGGTCAAAGAGTAGGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGAAGACAAGACCTTGTAGTAACAGACCAGGTCAAAGAGTAGGACA  150

seq1  AAGAACAATGGGGAAAGGGGAAGACAGAAGTCAGACAGGGTCAGTCCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAATGGGGAAAGGGGAAGACAGAAGTCAGACAGGGTCAGTCCTCA  200

seq1  GATAAGAGGTTAAGAGGTTAATTTCTCTGGATCCTTTTTTTAAAAAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGAGGTTAAGAGGTTAATTTCTCTGGATCCTTTTTTTAAAAAAAAT  250

seq1  TAAATACTACAATCAAGTTAGACGAATTCAATTTCTCTACATGGGAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACTACAATCAAGTTAGACGAATTCAATTTCTCTACATGGGAAAAT  300

seq1  ATGTTTCTTATTTCTATTATAAAGTTAACTAATAGTCAAATCCCTCTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCTTATTTCTATTATAAAGTTAACTAATAGTCAAATCCCTCTATT  350

seq1  TCAAAATTTCAGTTCTGGCAATTTCAATAATCTAAGACTGCTGTTGGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATTTCAGTTCTGGCAATTTCAATAATCTAAGACTGCTGTTGGAAA  400

seq1  ACCCTAGCATCTGAAGGACAAGTCTGGTACACCATCTGCATTGGAAGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTAGCATCTGAAGGACAAGTCTGGTACACCATCTGCATTGGAAGTAA  450

seq1  AGTTTTATTGAAACACAGCTGCATGCATCTGTTTAAGTATTGCCTACAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTATTGAAACACAGCTGCATGCATCTGTTTAAGTATTGCCTACAGC  500

seq1  CACTTTGAAATTACAATGGAAGAGTTAAATATTGGTACAGAAACTTTGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGAAATTACAATGGAAGAGTTAAATATTGGTACAGAAACTTTGGC  550

seq1  TCTTAAGCTTGAAGTTACTGTCTGCTTCTTTATAAATCAGTGTGCAGACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAGCTTGAAGTTACTGTCTGCTTCTTTATAAATCAGTGTGCAGACC  600

seq1  TCTGATAAAACTCAACCTAACGCTGGCAGTAAATGCGTTAGTGAGAAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATAAAACTCAACCTAACGCTGGCAGTAAATGCGTTAGTGAGAAAAC  650

seq1  TTTAAGAATCTGGAAAAGTACAAGGGAAACAGTTGTCATGCTTTTAAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAATCTGGAAAAGTACAAGGGAAACAGTTGTCATGCTTTTAAGTA  700

seq1  CAACCATTTCTTCTTCACTCAGCAGTTCTGTGACGCAAAGTAGCAGGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CAACCATTTCTTCTTCACTCAGCAGTTCTGTGACGCAAAGTAGCAAGACA  750

seq1  GAAATGGCTAGGAACAACAGGCAGTGCCACCTAGTAGTAGCTGATAGTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGCTAGGAACAACAGGCAGTGCCACCTAGTAGTAGCTGATAGTCA  800

seq1  TTTGGACAACTGGGAATAAAAAGGGATAGTCTGTGTCCAGTTTGCACAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGACAACTGGGAATAAAAAGGGATAGTCTGTGTCCAGTTTGCACAGG  850

seq1  CTCACCATACTGTAAAGAATACGAGCTAGAAATTATTATAGAATTAATGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCATACTGTAAAGAATACGAGCTAGAAATTATTATAGAATTAATGC  900

seq1  GTGTAATGATAGAATTATGAGAGATTTATTTGGGGTTTTAAAGGAGTAAG  950
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GTGTAATGATAGAATTATGAGAGATTTATTTGGGG-TTTAAAGGAGTAAG  949

seq1  TTTCAACAATCTGGAAAACTCAACCCTTGGAGCTTATTCTCAATATTTCT  1000
      |||||||||||||| |||||| ||||||||||| ||||||| ||||||||
seq2  TTTCAACAATCTGG-AAACTC-ACCCTTGGAGC-TATTCTC-ATATTTCT  995

seq1  GGATGAAGTATTCGTGATGTGTCACTGTGATGCAAGACAGAGTGTGTGAT  1050
       |||| |||| |||||||||||||||||||||| ||||||||||||||||
seq2  -GATG-AGTA-TCGTGATGTGTCACTGTGATGC-AGACAGAGTGTGTGAT  1041

seq1  GTGCATATGTCAACGGCCATCCACTAAGCAGACTCTCACGTAGCTTTTGC  1100
      ||||||||||| |||  |||||||| ||| |||| ||||||||| |||| 
seq2  GTGCATATGTC-ACG--CATCCACT-AGC-GACTTTCACGTAGCCTTTGG  1086

seq1  CTGTCTGTGGTCAACATTTCTCTC-TTAAG-CTCTTTCTCTAGTTC  1144
      |||||||| ||||   |||||||| ||||| ||||||  |||||||
seq2  CTGTCTGT-GTCACATTTTCTCTCTTTAAGCCTCTTTTCCTAGTTC  1131