BAC Information

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BAC

Clone NameB6Ng01-151P16
Chromosome15 (Build37)
Map Location 21,913,717 - 21,914,491
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh12, LOC100040351
Downstream geneEG545091, Cdh18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151P16.bB6Ng01-151P16.g
ACCDH947667DH947668
length1,225696
definitionDH947667|Mus musculus domesticus DNA, BAC clone: B6Ng01-151P16, 5' end.DH947668|Mus musculus domesticus DNA, BAC clone: B6Ng01-151P16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaacagaggaatctcaaatgatcaagaagcacctaaagagatg
ttcaaagtctatattcatcaaggaaataccactcaaaattactctgaaat
ttcaccttaaactcatcagcatagctaagatcagaaaagattccagtaca
tgctggcaaggttgtggtgtaaggggaacactcctccattactagtagta
atacaaacttctacaaccgctctgagaatcaatttggtgctttctcagat
tggaaatagttcttcaagacccagctataccactactgggcttaaaccca
aaagatgctccaccatctcacaatgacattggctcaactatgctcatagc
agctttattcataatagcaagacactggaaacaaactagatgtccctcaa
ataaagattgggtaaagaaaatgtggttcatttacataaggaattctact
cagccattaaaaacaagagcatcatgaatttcaaacacaggcagatggaa
ctagaaagtatcctgagttaacccagacccaaaaggacatgcatggtgtg
ttctcactgataagtgcatattaaccatgaagtacaggatgtaatcaaca
aacccaaagaagccaaataacaaggaaagacttttacaggaggatgtttg
aatctttctaagatggagaagaaaaattgatataagaagtttatagaagg
agggaactggatgaaagaggggttgagtagggtggcaggacacaggagag
gagagaaggggagagagaaggattatcagatttggaaaggatcaatctct
aagttgtgccagaggcctgggttggagagaggcccaagagagtaaatggg
gcaactctacctgagactcctagcagtggaagatatcgatcctgatgttt
gtaaacaagcaggactcccagtagtgggatgaagacagtaacccatccac
aaagctttctatctgtaatgtgtctgcctacagatgtttaggtacagata
cagactcagatgtcatccaatgactgcaccaattgagacccattctatgg
cagaccatccctgacatattgatgatactctgtagctacttcagacctag
catactgtcctcttaaggctccccccgcgccatgaagagattcgagaccc
acccccaactgatggatcagaacttccaagaatggggatgaattaggaat
ccgaacccggatattcctatagatg
gaattcttattcagtaagtttacaatagcatattaagttttggggaagca
tagaggatgtaaatgaaattagacatttaaaacaatattattttcatgta
ttaaactatcgaatagtaatatatatgtgtgtgtatttgtctgagtgtgt
gtgtgcgtgtgtgtgtgcgtgtgtgtgtgtgtatttgtgtgtgtgtgtgt
gtgcagttttcaattatgtttctatgaccagaagaattttaaaagttcct
aataatgtctttatttttaaaaataacttaaagtatattgatcactattc
taagcaaaagactatcaaataaactgttctttattcatttatgaaaaatc
aaacgactatgtgatctatgtaatttcacatgagagtgttaataaattag
tcactttttctggaataaaaatatcaccatttattatgttctgtgtattg
ttttactttgaagtttctttcttaataaaagacacagataattataataa
tgcagatgaaattattctcttctatttttttggaggatgaaaattctctc
caaattaactctaataatactcttactcatgataagacgtgaaagaaaca
tcaacttccaggaaggctatttctcatatatattttatttaacttttttc
atttttaatacagctattgatagtttttgatgatggtatattgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_21913717_21914491
seq2: B6Ng01-151P16.g_67_762

seq1  GAATTCTTATTCAGTAAGTTTACAATAGCATATTAAGTTTTGGGGAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATTCAGTAAGTTTACAATAGCATATTAAGTTTTGGGGAAGCA  50

seq1  TAGAGGATGTAAATGAAATTAGACATTTAAAACAATATTATTTTCATGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGATGTAAATGAAATTAGACATTTAAAACAATATTATTTTCATGTA  100

seq1  TTAAACTATCGAATAGTAATATATATGTGTGTGTATTTGTCTGAGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTATCGAATAGTAATATATATGTGTGTGTATTTGTCTGAGTGTGT  150

seq1  GTGTGCGTGTGTGTGTGCGTGTGTGTGTGTGTATTTGTGTGTGTGTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCGTGTGTGTGTGCGTGTGTGTGTGTGTATTTGTGTGTGTGTGTGT  200

seq1  GTGCAGTTTTCAATTATGTTTCTATGACCAGAAGAATTTTAAAAGTTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGTTTTCAATTATGTTTCTATGACCAGAAGAATTTTAAAAGTTCCT  250

seq1  AATAATGTCTTTATTTTTAAAAATAACTTAAAGTATATTGATCACTATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGTCTTTATTTTTAAAAATAACTTAAAGTATATTGATCACTATTC  300

seq1  TAAGCAAAAGACTATCAAATAAACTGTTCTTTATTCATTTATGAAAAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAAAAGACTATCAAATAAACTGTTCTTTATTCATTTATGAAAAATC  350

seq1  AAACGACTATGTGATCTATGTAATTTCACATGAGAGTGTTAATAAATTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGACTATGTGATCTATGTAATTTCACATGAGAGTGTTAATAAATTAG  400

seq1  TCACTTTTTCTGGAATAAAAATATCACCATTTATTATGTTCTGTGTATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTTTCTGGAATAAAAATATCACCATTTATTATGTTCTGTGTATTG  450

seq1  TTTTACTTTGAAGTTTCTTTCTTAATAAAAGACACAGATAATTATAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTTTGAAGTTTCTTTCTTAATAAAAGACACAGATAATTATAATAA  500

seq1  TGCAGATGAAATTATTCTCTTCTATTTTTTTGGAGGATGAAAATTCTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATGAAATTATTCTCTTCTATTTTTTTGGAGGATGAAAATTCTCTC  550

seq1  CAAATTAACTCTAATAATACTCTTACTCATGATAAGACGTGAAAGAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTAACTCTAATAATACTCTTACTCATGATAAGACGTGAAAGAAACA  600

seq1  TCAACTTCCAGGAAGGCTATTTCTCATATATA-TTTATTTAACTTTTTTC  649
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCAACTTCCAGGAAGGCTATTTCTCATATATATTTTATTTAACTTTTTTC  650

seq1  ATTTTTAATACAGCTATTGATAG-TTTTGATGATGGTATA-TGTCTAAGA  697
      ||||||||||||||||||||||| |||||||||||||||| |||||    
seq2  ATTTTTAATACAGCTATTGATAGTTTTTGATGATGGTATATTGTCT----  696

seq1  CAATAGATTTCTTGAATTTTTAAGACAGTGTCCAAAGCAAATTTTAATCT  747
                                                        
seq2  --------------------------------------------------  696

seq1  ACTACCCATAAAGAGACTGGCATTGTCT  775
                                  
seq2  ----------------------------  696