BAC Information

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BAC

Clone NameB6Ng01-152A16
Chromosome15 (Build37)
Map Location 37,816,669 - 37,912,137
singlet/doubletdoublet
Overlap geneLOC667534, Rrm2b, LOC100041478, Edd1
Upstream geneZfp706, LOC670911, LOC667492, LOC100041288, Grhl2, Ncald, LOC667498, 4930447A16Rik, LOC100041313
Downstream geneOdf1, LOC382986, LOC667563, Klf10, Azin1, Siah1-ps2, Atp6v1c1, Baalc, TOB3L, Fzd6, LOC636952, Cthrc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152A16.bB6Ng01-152A16.g
ACCDH947714DH947715
length1,0081,048
definitionDH947714|Mus musculus domesticus DNA, BAC clone: B6Ng01-152A16, 5' end.DH947715|Mus musculus domesticus DNA, BAC clone: B6Ng01-152A16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,816,669 - 37,817,426)(37,911,091 - 37,912,137)
sequence
gaattcataagttcaaagttttaacattaatcaacagagttctaatgcac
tattaatctagttctggtaaactactgttaatgttataatcacaacttca
atattttaattatccattggttgtttttaaatataaacttgaaaactgct
tctcattgtgctaaaataaatctctgtctaacctatacattcagcattct
ggaaagtgtgttaatgcctttaacccaaaatcattttggggtgtgcaaag
ctttactatatgtagcctctcccagccttgagcagggtggttcagatcta
ttttgccactgtgaatgagaccacctggggtggaatcttcccttctattg
ctctgtcacctgcgaaccactacccgctgagcggccgaacctgtcttcct
gagatatttctgagatagctgacaacctgtggaattggcgacctagtgtt
aacaacttggcaacaaagcatcaagaagcctggtgtggcaggggatgagc
ctcccctctttataagcacagactcttagtaaacattgggccttgaccag
aaatctgtcttggtttcatttcttctctcgccatttcctcccttatagct
ccagcctcccactcagttcgtgtggccacaggcagctacagatggcgtct
gaacaggaacctgagtatgggaggacaaactgagagaacactgtctcggt
agagctctacaggaagattaagaagaagatgtatccagcacactgagcaa
cactttgtgttcatgtattcacactagccctggctttaaacttcatcctt
tcaaaattgttgctgtaggtgcaaaaggatacaagctagattgagtcagc
attggcccagcgctgatatcagctaggggttgacagtggaaatgggagta
aaaagaaaacaggcatttgtccgcagttaagaactgcatcaggtgagagg
agtagggcttaaaatataaataaataaattaaaataaataaaataaataa
ataagtaa
gaattcagtggcttcaattgtttaagaaatctcagcacagtttataatga
aatcaagggctggagagggctcagccagtaaaggctaggctcgcaaccaa
atacaaggacatcgatctagctctagttgttgcatactatttcaaagctt
tggcatgacaggggaagtgtggttcacaaatattaaagtgaagtgtactg
tgccatgtgcaaccatcggtaacccttagaaaccaaggagttaagaaaat
ggtttagtaatagtgcttgctgtgagattaggaggactctagttcaaatc
cccagcaaattaaaaactgggcatggcttacatgtgcttataacctgtgt
tgtggagtgacaagttgcagtgagagagcctgtatcaaaaggcatggtga
tagacatctgtgatgcgtgcacttagacacacgcacacgcgcacacacac
acacacacacacacacacacacacacacacacacacacacacacacacac
acaggacatactgcacacaccccagagcctgtatcaaaaggcatggtgat
agacatctgtgatgcgtgcacttagacatacacacatacacacacacaca
cacacacacacacacacacacacacacacacacacacacacacgacatac
tgcacacaccccagagaaagagaaaggccctggcagcacagaggattttg
agcagccatgttttcttgtgtttttctctttttagcattgactgaaatat
aacatttttcatcatgtacttttctcaatgtgttgtatttcatcttttct
tctaggtttaatgcaaagattgaggaacagaggtgaaagagaccgggaga
gagagagagaacgggatatgaggaggagcagtggcttgcgtgcaggatct
cgaagagacaggaataggtatgatggatttaggtgttactgaataccaac
attttaggcaagttggataaggcttttttgtaaatcaatgtacgatttgt
tgtttggacaaaatgcagggaactgtagtcctgtaactttttcaggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_37816669_37817426
seq2: B6Ng01-152A16.b_41_798

seq1  GAATTCATAAGTTCAAAGTTTTAACATTAATCAACAGAGTTCTAATGCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAGTTCAAAGTTTTAACATTAATCAACAGAGTTCTAATGCAC  50

seq1  TATTAATCTAGTTCTGGTAAACTACTGTTAATGTTATAATCACAACTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATCTAGTTCTGGTAAACTACTGTTAATGTTATAATCACAACTTCA  100

seq1  ATATTTTAATTATCCATTGGTTGTTTTTAAATATAAACTTGAAAACTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTAATTATCCATTGGTTGTTTTTAAATATAAACTTGAAAACTGCT  150

seq1  TCTCATTGTGCTAAAATAAATCTCTGTCTAACCTATACATTCAGCATTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTGTGCTAAAATAAATCTCTGTCTAACCTATACATTCAGCATTCT  200

seq1  GGAAAGTGTGTTAATGCCTTTAACCCAAAATCATTTTGGGGTGTGCAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGTGTGTTAATGCCTTTAACCCAAAATCATTTTGGGGTGTGCAAAG  250

seq1  CTTTACTATATGTAGCCTCTCCCAGCCTTGAGCAGGGTGGTTCAGATCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTATATGTAGCCTCTCCCAGCCTTGAGCAGGGTGGTTCAGATCTA  300

seq1  TTTTGCCACTGTGAATGAGACCACCTGGGGTGGAATCTTCCCTTCTATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCCACTGTGAATGAGACCACCTGGGGTGGAATCTTCCCTTCTATTG  350

seq1  CTCTGTCACCTGCGAACCACTACCCGCTGAGCGGCCGAACCTGTCTTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCACCTGCGAACCACTACCCGCTGAGCGGCCGAACCTGTCTTCCT  400

seq1  GAGATATTTCTGAGATAGCTGACAACCTGTGGAATTGGCGACCTAGTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATATTTCTGAGATAGCTGACAACCTGTGGAATTGGCGACCTAGTGTT  450

seq1  AACAACTTGGCAACAAAGCATCAAGAAGCCTGGTGTGGCAGGGGATGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTTGGCAACAAAGCATCAAGAAGCCTGGTGTGGCAGGGGATGAGC  500

seq1  CTCCCCTCTTTATAAGCACAGACTCTTAGTAAACATTGGGCCTTGACCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTCTTTATAAGCACAGACTCTTAGTAAACATTGGGCCTTGACCAG  550

seq1  AAATCTGTCTTGGTTTCATTTCTTCTCTCGCCATTTCCTCCCTTATAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGTCTTGGTTTCATTTCTTCTCTCGCCATTTCCTCCCTTATAGCT  600

seq1  CCAGCCTCCCACTCAGTTCGTGTGGCCACAGGCAGCTACAGATGGCGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTCCCACTCAGTTCGTGTGGCCACAGGCAGCTACAGATGGCGTCT  650

seq1  GAACAGGAACCTGAGTATGGGAGGACAAACTGAGAGAACACTGTCTCGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGGAACCTGAGTATGGGAGGACAAACTGAGAGAACACTGTCTCGGT  700

seq1  AGAGCTCTACAGGAAGATTAAGAAGAAGATGTATCCAGCACACTGAGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCTACAGGAAGATTAAGAAGAAGATGTATCCAGCACACTGAGCAA  750

seq1  CACTTTGT  758
      ||||||||
seq2  CACTTTGT  758

seq1: chr15_37911091_37912137
seq2: B6Ng01-152A16.g_65_1112 (reverse)

seq1  GTCCTGGAAAAGTTACA-GACTACAGTTCCCATGCA-TTTGTCCAAACAA  48
      |||||| |||||||||| ||||||||||||| |||| |||||||||||||
seq2  GTCCTGAAAAAGTTACAGGACTACAGTTCCC-TGCATTTTGTCCAAACAA  49

seq1  CAAATCGTACATTGATTTAC-AAAAAGCCTTATCCAACTTGCCTAAAATG  97
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CAAATCGTACATTGATTTACAAAAAAGCCTTATCCAACTTGCCTAAAATG  99

seq1  TTGGTATTCAGTAACACCTAAAATCCATCATACCTATCCCTGTCTCTTCG  147
      ||||||||||||||||||| ||||||||||||||||| ||||||||||||
seq2  TTGGTATTCAGTAACACCT-AAATCCATCATACCTATTCCTGTCTCTTCG  148

seq1  AGATCCTGCACGCAAGCCACTGCTCCTCCTCATTTCCCGTTCTCTCTCTC  197
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGATCCTGCACGCAAGCCACTGCTCCTCCTCATATCCCGTTCTCTCTCTC  198

seq1  TCTCCCGGTCTCTTTCACCTCTGTTCCTCAATCTTTGCATTAAACCTAGA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCGGTCTCTTTCACCTCTGTTCCTCAATCTTTGCATTAAACCTAGA  248

seq1  AGAAAAGATGAAATACAACACATTGAGAAAAGTACATGATGAAAAATGTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGATGAAATACAACACATTGAGAAAAGTACATGATGAAAAATGTT  298

seq1  ATATTTCAGTCAATGCTAAAAAGAGAAAAACACAAGAAAACATGGCTGCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCAGTCAATGCTAAAAAGAGAAAAACACAAGAAAACATGGCTGCT  348

seq1  CAAAATCCTCTGTGCTGCCAGGGCCTTTCTCTTTCTCTGGGGTGTGTGCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATCCTCTGTGCTGCCAGGGCCTTTCTCTTTCTCTGGGGTGTGTGCA  398

seq1  GTATGTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  448

seq1  TGTGTGTGTGTGTATGTGTGTATGTCTAAGTGCACGCATCACAGATGTCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTATGTGTGTATGTCTAAGTGCACGCATCACAGATGTCT  498

seq1  ATCACCATGCCTTTTGATACAGGCTCTGGGGTGTGTGCAGTATGTCCTGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCATGCCTTTTGATACAGGCTCTGGGGTGTGTGCAGTATGTCCTGT  548

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  598

seq1  GTGTGTGTGCGCGTGTGCGTGTGTCTAAGTGCACGCATCACAGATGTCTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGCGCGTGTGCGTGTGTCTAAGTGCACGCATCACAGATGTCTA  648

seq1  TCACCATGCCTTTTGATACAGGCTCTCTCACTGCAACTTGTCACTCCACA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCATGCCTTTTGATACAGGCTCTCTCACTGCAACTTGTCACTCCACA  698

seq1  ACACAGGTTATAAGCACATGTAAGCCATGCCCAGTTTTTAATTTGCTGGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGTTATAAGCACATGTAAGCCATGCCCAGTTTTTAATTTGCTGGG  748

seq1  GATTTGAACTAGAGTCCTCCTAATCTCACAGCAAGCACTATTACTAAACC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGAACTAGAGTCCTCCTAATCTCACAGCAAGCACTATTACTAAACC  798

seq1  ATTTTCTTAACTCCTTGGTTTCTAAGGGTTACCGATGGTTGCACATGGCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTAACTCCTTGGTTTCTAAGGGTTACCGATGGTTGCACATGGCA  848

seq1  CAGTACACTTCACTTTAATATTTGTGAACCACACTTCCCCTGTCATGCCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACACTTCACTTTAATATTTGTGAACCACACTTCCCCTGTCATGCCA  898

seq1  AAGCTTTGAAATAGTATGCAACAACTAGAGCTAGATCGATGTCCTTGTAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTGAAATAGTATGCAACAACTAGAGCTAGATCGATGTCCTTGTAT  948

seq1  TTGGTTGCGAGCCTAGCCTTTACTGGCTGAGCCCTCTCCAGCCCTTGATT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTGCGAGCCTAGCCTTTACTGGCTGAGCCCTCTCCAGCCCTTGATT  998

seq1  TCATTATAAACTGTGCTGAGATTTCTTAAACAATTGAAGCCACTGAATTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATAAACTGTGCTGAGATTTCTTAAACAATTGAAGCCACTGAATTC  1048