BAC Information

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BAC

Clone NameB6Ng01-152D12
Chromosome15 (Build37)
Map Location 30,042,646 - 30,143,014
singlet/doubletdoublet
Overlap geneCtnnd2
Upstream geneLOC382975
Downstream gene9630009A06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152D12.bB6Ng01-152D12.g
ACCDH947845DH947846
length1,164972
definitionDH947845|Mus musculus domesticus DNA, BAC clone: B6Ng01-152D12, 5' end.DH947846|Mus musculus domesticus DNA, BAC clone: B6Ng01-152D12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,141,831 - 30,143,014)(30,042,646 - 30,043,622)
sequence
gaattcctgcgacttctctttcacaaaattctttctctataaaatcagga
ccaccttccacggcttttattgttttgttttcaagattaagccatgctgg
gggaaggttatatgatgaccgtgatgaccatccactattttcttctgaac
ctggccccgttgtgatgggctgtcacttttcataaagcaagtgttaaaaa
tacaccataattataatgtgcagctgcattcaaagccccaaataaatctt
attaagtcacagttccttaaagagtgatggttacttgggctttcccattc
aagcagaaaagcttgtaatgcccagagggcagccttcaaccagggattaa
taggagatgccaaaagaatcaggggaaagacatcatttcacaggataaaa
cggggacaacggcagcttgtttcagcaacagagaaacagaaacgagagac
tccatcatgaagtacacagtccccaggcccaggctagcatcttggttcat
caccctctcttctgcagagcacagtgaaccactagcctgaccttccgtcg
ctgaaaacaggtagaacccacaggatccttgtgaggataagtggacagcc
acgtatgagtgaagttaccttttgagcaacaattgttttggacaaataag
catgggaaaacaaaaacaagtttcacatatgtacattccaagttagagca
ttgtttcctccaagtcagtaatgatgggtgaaaggaaggttgtatgcaga
ttctttgtaggtagaaatacaaagaaaacatgaagctgatgaggtgtatg
atatgcatccatgattcatgtctcacattttccccaaatacagcctttct
atatagtcagggctgaccttgaactacgaagcccctcctcagcttcttat
gttctgggattgcaggtatgttagtgcatgagtgcctgctctctgactca
gaacctttgaaaccaatgcctagtaccctggcagtcataaactcaggttc
tctgggaagagacgtagcagatcgtgcctggtcacattagcatcgcttag
acatgctgcttttatttaattgtgcattcatatgtgtgtgtgtttgtatc
aaacaagccaaacacggttggggagacaaagaaaatgtttagataggtct
ccttccacaagtgg
gaattcttagaaaaatgtaaaaaacaaagttttacttatagtttttagta
taatcttttgtgaattctttaagaatggtaagcaatgttgcaatacatct
ttagcatatttattcctttactcctcctagacccaccatgccttccatct
cccacaacttcatgtcctcttttgatttattttaatagttcaccaagtcg
agtttttgctgcccatgtacttaaagatgtggcctcatgcactggagtgt
tgtcacattaccagaggccacacttgtaacaaaattgacttttcctctct
tcattagtggagtggtcctgtcaatttagggcccttaacaccaaggacat
taaattatatcttataaatctatagaaaataataacgttaaaacgttgct
tagtataaattataggattagaagttaagaactcagaggatatttcagac
ccaaatatgtttttactttcccaaatgggattaaaatgtgttaattgggc
ggtttcttttaaatctcagaaaaagaacacacacacaccctgataatagt
agaataaaaatttttaggaaaaatcaatccaaccaggaaatagtgaagaa
aagtttgcaaagaacactacaaaaaatgtttaatgatttaatataagggg
caaaaagttacatttacacaactcggtatctagtatacagaatggtgaca
ccaattagtagtagagcttaagtatgctaaatggggtcgtaaatgggttt
aaaacattacacacaatattaactgtgaagtgtagatgataattagtctg
atattgggaacatttcatggtgtgtacatgcaccagcaaattctactgca
ctactgcatatctatttactttgtttttattaggtatttatttcatttac
atttccatgctatcccaaagtttccccacccgctccccacccacccaccc
acccacttcacttcttggccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_30141831_30143014
seq2: B6Ng01-152D12.b_45_1208 (reverse)

seq1  CCACTTGTTGGAAGGAGAGACCCAAATTCTAAACATTTATCCTTTGTCTC  50
      ||||||| ||||||||||   || |  ||||||||||  | |||||||||
seq2  CCACTTG-TGGAAGGAGA---CCTA--TCTAAACATT--TTCTTTGTCTC  42

seq1  CCACACGTGTGTTGTGGCTTGTTTGTATACAAACACACAACCACATATGA  100
      || ||   ||||| ||||||||||| |||||||||||||  |||||||| 
seq2  CC-CAACCGTGTT-TGGCTTGTTTG-ATACAAACACACA--CACATATG-  86

seq1  AATGCACAATTAAATAAAAGCAGGCATGTCTAAGGCGATGCT-ATGTGAC  149
      |||||||||||||||||||||| |||||||||| |||||||| |||||| 
seq2  AATGCACAATTAAATAAAAGCA-GCATGTCTAA-GCGATGCTAATGTGA-  133

seq1  CCAGGCACGGATCTGCTACGTCTCTTCCCAGAGAACCTGGGTTTATGACT  199
      |||||||| |||||||||||||||||||||||||||||| ||||||||||
seq2  CCAGGCAC-GATCTGCTACGTCTCTTCCCAGAGAACCTGAGTTTATGACT  182

seq1  GCCAGGGTTACTAGGCATTGGTTTTCAAAGGTTCTGAGTCAGAGAGCAGG  249
      ||||||| ||||||||||||| ||||||||||||||||||||||||||||
seq2  GCCAGGG-TACTAGGCATTGG-TTTCAAAGGTTCTGAGTCAGAGAGCAGG  230

seq1  CACTCATGCACTAACATACCTGCAATCCCAGAACATAAGAAGCTGAGGGA  299
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CACTCATGCACTAACATACCTGCAATCCCAGAACATAAGAAGCTGA-GGA  279

seq1  GGGGCTTCGTAGTTCAAGGTCAGCCTTGACTATATAGAAAGGCTGTATTT  349
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGGGCTTCGTAGTTCAAGGTCAGCCCTGACTATATAGAAAGGCTGTATTT  329

seq1  GGGGAAAATGTGAGACATGAATCATGGATGCATATCATACACCTCATCAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAATGTGAGACATGAATCATGGATGCATATCATACACCTCATCAG  379

seq1  CTTCATGTTTTCTTTGTATTTCTACCTACAAAGAATCTGCATACAACCTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATGTTTTCTTTGTATTTCTACCTACAAAGAATCTGCATACAACCTT  429

seq1  CCTTTCACCCATCATTACTGACTTGGAGGAAACAATGCTCTAACTTGGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCACCCATCATTACTGACTTGGAGGAAACAATGCTCTAACTTGGAA  479

seq1  TGTACATATGTGAAACTTGTTTTTGTTTTCCCATGCTTATTTGTCCAAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATATGTGAAACTTGTTTTTGTTTTCCCATGCTTATTTGTCCAAAA  529

seq1  CAATTGTTGCTCAAAAGGTAACTTCACTCATACGTGGCTGTCCACTTATC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGTTGCTCAAAAGGTAACTTCACTCATACGTGGCTGTCCACTTATC  579

seq1  CTCACAAGGATCCTGTGGGTTCTACCTGTTTTCAGCGACGGAAGGTCAGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAAGGATCCTGTGGGTTCTACCTGTTTTCAGCGACGGAAGGTCAGG  629

seq1  CTAGTGGTTCACTGTGCTCTGCAGAAGAGAGGGTGATGAACCAAGATGCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGGTTCACTGTGCTCTGCAGAAGAGAGGGTGATGAACCAAGATGCT  679

seq1  AGCCTGGGCCTGGGGACTGTGTACTTCATGATGGAGTCTCTCGTTTCTGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGGCCTGGGGACTGTGTACTTCATGATGGAGTCTCTCGTTTCTGT  729

seq1  TTCTCTGTTGCTGAAACAAGCTGCCGTTGTCCCCGTTTTATCCTGTGAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTTGCTGAAACAAGCTGCCGTTGTCCCCGTTTTATCCTGTGAAA  779

seq1  TGATGTCTTTCCCCTGATTCTTTTGGCATCTCCTATTAATCCCTGGTTGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCTTTCCCCTGATTCTTTTGGCATCTCCTATTAATCCCTGGTTGA  829

seq1  AGGCTGCCCTCTGGGCATTACAAGCTTTTCTGCTTGAATGGGAAAGCCCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGCCCTCTGGGCATTACAAGCTTTTCTGCTTGAATGGGAAAGCCCA  879

seq1  AGTAACCATCACTCTTTAAGGAACTGTGACTTAATAAGATTTATTTGGGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACCATCACTCTTTAAGGAACTGTGACTTAATAAGATTTATTTGGGG  929

seq1  CTTTGAATGCAGCTGCACATTATAATTATGGTGTATTTTTAACACTTGCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAATGCAGCTGCACATTATAATTATGGTGTATTTTTAACACTTGCT  979

seq1  TTATGAAAAGTGACAGCCCATCACAACGGGGCCAGGTTCAGAAGAAAATA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAAAAGTGACAGCCCATCACAACGGGGCCAGGTTCAGAAGAAAATA  1029

seq1  GTGGATGGTCATCACGGTCATCATATAACCTTCCCCCAGCATGGCTTAAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGGTCATCACGGTCATCATATAACCTTCCCCCAGCATGGCTTAAT  1079

seq1  CTTGAAAACAAAACAATAAAAGCCGTGGAAGGTGGTCCTGATTTTATAGA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAAACAAAACAATAAAAGCCGTGGAAGGTGGTCCTGATTTTATAGA  1129

seq1  GAAAGAATTTTGTGAAAGAGAAGTCGCAGGAATTC  1184
      |||||||||||||||||||||||||||||||||||
seq2  GAAAGAATTTTGTGAAAGAGAAGTCGCAGGAATTC  1164

seq1: chr15_30042646_30043622
seq2: B6Ng01-152D12.g_68_1039

seq1  GAATTCTTAGAAAAATGTAAAAAACAAAGTTTTACTTATAGTTTTTAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGAAAAATGTAAAAAACAAAGTTTTACTTATAGTTTTTAGTA  50

seq1  TAATCTTTTGTGAATTCTTTAAGAATGGTAAGCAATGTTGCAATACATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTTTTGTGAATTCTTTAAGAATGGTAAGCAATGTTGCAATACATCT  100

seq1  TTAGCATATTTATTCCTTTACTCCTCCTAGACCCACCATGCCTTCCATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATATTTATTCCTTTACTCCTCCTAGACCCACCATGCCTTCCATCT  150

seq1  CCCACAACTTCATGTCCTCTTTTGATTTATTTTAATAGTTCACCAAGTCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAACTTCATGTCCTCTTTTGATTTATTTTAATAGTTCACCAAGTCG  200

seq1  AGTTTTTGCTGCCCATGTACTTAAAGATGTGGCCTCATGCACTGGAGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTGCTGCCCATGTACTTAAAGATGTGGCCTCATGCACTGGAGTGT  250

seq1  TGTCACATTACCAGAGGCCACACTTGTAACAAAATTGACTTTTCCTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACATTACCAGAGGCCACACTTGTAACAAAATTGACTTTTCCTCTCT  300

seq1  TCATTAGTGGAGTGGTCCTGTCAATTTAGGGCCCTTAACACCAAGGACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAGTGGAGTGGTCCTGTCAATTTAGGGCCCTTAACACCAAGGACAT  350

seq1  TAAATTATATCTTATAAATCTATAGAAAATAATAACGTTAAAACGTTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTATATCTTATAAATCTATAGAAAATAATAACGTTAAAACGTTGCT  400

seq1  TAGTATAAATTATAGGATTAGAAGTTAAGAACTCAGAGGATATTTCAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATAAATTATAGGATTAGAAGTTAAGAACTCAGAGGATATTTCAGAC  450

seq1  CCAAATATGTTTTTACTTTCCCAAATGGGATTAAAATGTGTTAATTGGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATATGTTTTTACTTTCCCAAATGGGATTAAAATGTGTTAATTGGGC  500

seq1  GGTTTCTTTTAAATCTCAGAAAAAGAACACACACACACCCTGATAATAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTTTTAAATCTCAGAAAAAGAACACACACACACCCTGATAATAGT  550

seq1  AGAATAAAAATTTTTAGGAAAAATCAATCCAACCAGGAAATAGTGAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAAAATTTTTAGGAAAAATCAATCCAACCAGGAAATAGTGAAGAA  600

seq1  AAGTTTGCAAAGAACACTACAAAAAATGTTTAATGATTTAATATAAGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGCAAAGAACACTACAAAAAATGTTTAATGATTTAATATAAGGGG  650

seq1  CAAAAAGTTACATTTACACAACTCGGTATCTAGTATACAGAATGGTGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGTTACATTTACACAACTCGGTATCTAGTATACAGAATGGTGACA  700

seq1  CCAATTAGTAGTAGAGCTTAAGTATGCTAAATGGGGTCGTAAATGGGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTAGTAGTAGAGCTTAAGTATGCTAAATGGGGTCGTAAATGGGTTT  750

seq1  AAAACATTACACACAATATTAACTGTGAAGTGTAGATGATAATTAGTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATTACACACAATATTAACTGTGAAGTGTAGATGATAATTAGTCTG  800

seq1  ATATTGGGAACATTTCATGGTGTGTACATGCACCAGCAAATTCTACTGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGGGAACATTTCATGGTGTGTACATGCACCAGCAAATTCTACTGCA  850

seq1  CTACTGCATATCTATTTACTTTGTTTTTTATTAGGTATTTATTTCATTTA  900
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTACTGCATATCTATTTACTTTG-TTTTTATTAGGTATTTATTTCATTTA  899

seq1  CATTTCCAATGCTATCCCAAAAGTTTCCCCACCCGCTCCCCCACCCACCC  950
      ||||||| |||||||||| |||||||||||||||||| ||||||||||||
seq2  CATTTCC-ATGCTATCCC-AAAGTTTCCCCACCCGCT-CCCCACCCACCC  946

seq1  ACCCACCCACTTCCACTTCTTGGCCAT  977
      |||||||||||| ||||||||||||||
seq2  ACCCACCCACTT-CACTTCTTGGCCAT  972