BAC Information

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BAC

Clone NameB6Ng01-152K22
Chromosome15 (Build37)
Map Location 80,787,928 - 80,943,711
singlet/doubletdoublet
Overlap geneAdsl, Rutbc3, Mkl1
Upstream genePdgfb, Rpl3, Syngr1, Map3k7ip1, Mgat3, EG666948, Smcr7l, Atf4, Rps19bp1, Cacna1i, Enthd1, Grap2, AW544981, Tnrc6b, LOC625672
Downstream geneLOC675966, Mchr1, Slc25a17, St13, Xpnpep3, Dnajb7, Rbx1, EG383080, Ep300, L3mbtl2, Rangap1, Zc3h7b, Tef, LOC667073, Tob2, Phf5a, Aco2, Polr3h, Csdc2, Pmm1, EG545121, 1700029P11Rik, D15Wsu75e, Xrcc6, Nhp2l1, 4930407I10Rik, Mei1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152K22.bB6Ng01-152K22.g
ACCDH948198DH948199
length1,103775
definitionDH948198|Mus musculus domesticus DNA, BAC clone: B6Ng01-152K22, 5' end.DH948199|Mus musculus domesticus DNA, BAC clone: B6Ng01-152K22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,942,601 - 80,943,711)(80,787,928 - 80,788,701)
sequence
gaattcattcacatttaataaattcattgatttaaaaaaaaaaaaaaaga
cttgccttggtcatggtgtgtgttcacagcagtaaaaccctaactaagac
acttggtcattgtctctactcttcattcacatcctagagatttcaccact
acactttcacctgaaactgccctttgaatttgtcagtgttgtttgttatg
gatggtgtggcccttagtcctatcccagacatttgaaagccttcctctgc
taacattactcttggcatttttcatctcatctgtctgtccactacctttt
ccgctcagaccttttcctctgtctttctacttcctccttccattgtcttc
ctctgagaactcagtccggaggcagaggctttttttttttttaacacctt
tgcaggagttcagggcaggggcagaagtggaaaatccctgaagtgactgt
gatgcaagacagtgcgcctgccattctagagcagaggaagtctggagttt
gacatgtgcacagctgtgctgtatgtagagaagtgagagcactgcgttct
cagatctgttttacttgtatcttacatggaagagctgtggataggaaggc
gtctttcaggggcagttggtagtcaagctcttggttcctgtttactgacg
agtaggttcccttgggtcagtgcttctcaaccttcctgcttctacaaccc
tttaatacagttcctcatgctgtagtgaccctccgacaataattcatttc
gttgctacttcataactgtaattttgcttctgttatcgtaatgtacatat
ctgacgtgcaggatatctgatatgtgacccttaaaggggtcctgacccac
acgttgaggactactagcctttgcttcacctcgaccttggtggcctgact
tggaaacacttggtaagaaaagtccatggcctgtttcatagcactccatg
tctactttgaagctgagcatcttagctagaagacacatggtcccctctga
gcttagaacaacctggaaagcgttctctggagtggcagatctctggattc
cagctcagaaggctctggcaccaaggatggaaacgtaatgatttctttta
cta
gaattctgtgagttcaggtccaacctggtctatgtaatgggttcaaggat
agtcaaggatgcacatacctttcttaaaagaagaaaaaaattgcacaaag
attgctagaaagagtatcgccttgttaatttgattaccctggttaggtcg
taataattaagtatcccctttctagtctatatatgttctgacaagagctc
tcccttagagctacacttacaactctttagtttctgtgtttttggttttg
ttttgtgtgtgaattttctcactgtgtagctttggctggcttggaattct
ttttttttttttttttttaagatttatttatttattatatgttagtacac
cttagctatcttcagacacaccagaagagggcatcagatctcattacagg
tggttgtgagccaccatgtagtttctgggatttgaactcaggaccttcgg
aagagcagtcagtgcttttaaccgctgaaccatttctccagcccccagct
tggaattcttgtatggaccagactagcctcaaatttgaagaagtctgcct
gtctctgcttcccagagatgaactttggggtcaaagtgtgcaccaccata
cccagttcagccctatggttttgattttaggatgttaaagcattttgggg
gagcgggggttgagacagggtttctctgtgtagccctggctgccttggaa
atctcttgaagaccgggctgggctcgaactcaaaaattccgcctgccttt
gcctctcctttaaaggcatgcacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_80942601_80943711
seq2: B6Ng01-152K22.b_42_1144 (reverse)

seq1  TAGTAAAAGAAAATCATAACGTATCCATTCACTGGGTGCCAGAGCTTCTT  50
      ||||||||| ||||||| |||| |||||   || ||||||||||| |  |
seq2  TAGTAAAAG-AAATCATTACGTTTCCAT--CCTTGGTGCCAGAGCCTTCT  47

seq1  GAGCTGGAGT-CAGAGAACTGGCACACTTCAGAGACCGCTGTCCAGGTTG  99
      |||||||| | |||||| |||   |||| |||||| |||| |||||||||
seq2  GAGCTGGAATCCAGAGATCTG--CCACTCCAGAGAACGCTTTCCAGGTTG  95

seq1  TTCTAAGCTCAGGGGGGGACACTGTGTCTTTTTAGGCTCAGATGCTCAGC  149
      ||||||||||| | ||||||  |||||||| |   ||| |||||||||||
seq2  TTCTAAGCTCA-GAGGGGACCATGTGTCTTCT--AGCTAAGATGCTCAGC  142

seq1  TTCAAAGTAGACAATGGAGTGCTATGAAAACAGGCCATGGACTTTTCTTA  199
      |||||||||||| ||||||||||||| |||||||||||||||||||||||
seq2  TTCAAAGTAGAC-ATGGAGTGCTATG-AAACAGGCCATGGACTTTTCTTA  190

seq1  CCAAGTGTTTCCAAGTCAGGCCACCAAGGTCGAGGTGAAGCAAAGGCTAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTGTTTCCAAGTCAGGCCACCAAGGTCGAGGTGAAGCAAAGGCTAG  240

seq1  TAGTCCTCAACGTGTGGGTCAGGACCCCTTTAAGGGTCACATATCAGATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCTCAACGTGTGGGTCAGGACCCCTTTAAGGGTCACATATCAGATA  290

seq1  TCCTGCACGTCAGATATGTACATTACGATAACAGAAGCAAAATTACAGTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCACGTCAGATATGTACATTACGATAACAGAAGCAAAATTACAGTT  340

seq1  ATGAAGTAGCAACGAAATGAATTATTGTCGG-GGGTCACTACAGCATGAG  398
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATGAAGTAGCAACGAAATGAATTATTGTCGGAGGGTCACTACAGCATGAG  390

seq1  GAACTGTATTAAAGGGTTGTAGAAGCAGGAAGGTTGAGAAGCACTGACCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGTATTAAAGGGTTGTAGAAGCAGGAAGGTTGAGAAGCACTGACCC  440

seq1  AAGGGAACCTACTCGTCAGTAAACAGGAACCAAGAGCTTGACTACCAACT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAACCTACTCGTCAGTAAACAGGAACCAAGAGCTTGACTACCAACT  490

seq1  GCCCCTGAAAGACGCCTTCCTATCCACAGCTCTTCCATGTAAGATACAAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTGAAAGACGCCTTCCTATCCACAGCTCTTCCATGTAAGATACAAG  540

seq1  TAAAACAGATCTGAGAACGCAGTGCTCTCACTTCTCTACATACAGCACAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAGATCTGAGAACGCAGTGCTCTCACTTCTCTACATACAGCACAG  590

seq1  CTGTGCACATGTCAAACTCCAGACTTCCTCTGCTCTAGAATGGCAGGCGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCACATGTCAAACTCCAGACTTCCTCTGCTCTAGAATGGCAGGCGC  640

seq1  ACTGTCTTGCATCACAGTCACTTCAGGGATTTTCCACTTCTGCCCCTGCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTTGCATCACAGTCACTTCAGGGATTTTCCACTTCTGCCCCTGCC  690

seq1  CTGAACTCCTGCAAAGGTGTTAAAAAAAAAAAAAGCCTCTGCCTCCGGAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACTCCTGCAAAGGTGTTAAAAAAAAAAAAAGCCTCTGCCTCCGGAC  740

seq1  TGAGTTCTCAGAGGAAGACAATGGAAGGAGGAAGTAGAAAGACAGAGGAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCTCAGAGGAAGACAATGGAAGGAGGAAGTAGAAAGACAGAGGAA  790

seq1  AAGGTCTGAGCGGAAAAGGTAGTGGACAGACAGATGAGATGAAAAATGCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTGAGCGGAAAAGGTAGTGGACAGACAGATGAGATGAAAAATGCC  840

seq1  AAGAGTAATGTTAGCAGAGGAAGGCTTTCAAATGTCTGGGATAGGACTAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTAATGTTAGCAGAGGAAGGCTTTCAAATGTCTGGGATAGGACTAA  890

seq1  GGGCCACACCATCCATAACAAACAACACTGACAAATTCAAAGGGCAGTTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCACACCATCCATAACAAACAACACTGACAAATTCAAAGGGCAGTTT  940

seq1  CAGGTGAAAGTGTAGTGGTGAAATCTCTAGGATGTGAATGAAGAGTAGAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGAAAGTGTAGTGGTGAAATCTCTAGGATGTGAATGAAGAGTAGAG  990

seq1  ACAATGACCAAGTGTCTTAGTTAGGGTTTTACTGCTGTGAACACACACCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGACCAAGTGTCTTAGTTAGGGTTTTACTGCTGTGAACACACACCA  1040

seq1  TGACCAAGGCAAGTCTTTTTTTTTTTTTTTAAATCAATGAATTTATTAAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAAGGCAAGTCTTTTTTTTTTTTTTTAAATCAATGAATTTATTAAA  1090

seq1  TGTGAATGAATTC  1111
      |||||||||||||
seq2  TGTGAATGAATTC  1103

seq1: chr15_80787928_80788701
seq2: B6Ng01-152K22.g_71_845

seq1  GAATTCTGTGAGTTCAGGTCCAACCTGGTCTATGTAATGGGTTCAAGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGAGTTCAGGTCCAACCTGGTCTATGTAATGGGTTCAAGGAT  50

seq1  AGTCAAGGATGCACATACCTTTCTTAAAAGAAGAAAAAAATTGCACAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAGGATGCACATACCTTTCTTAAAAGAAGAAAAAAATTGCACAAAG  100

seq1  ATTGCTAGAAAGAGTATCGCCTTGTTAATTTGATTACCCTGGTTAGGTCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTAGAAAGAGTATCGCCTTGTTAATTTGATTACCCTGGTTAGGTCG  150

seq1  TAATAATTAAGTATCCCCTTTCTAGTCTATATATGTTCTGACAAGAGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATTAAGTATCCCCTTTCTAGTCTATATATGTTCTGACAAGAGCTC  200

seq1  TCCCTTAGAGCTACACTTACAACTCTTTAGTTTCTGTGTTTTTGGTTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTAGAGCTACACTTACAACTCTTTAGTTTCTGTGTTTTTGGTTTTG  250

seq1  TTTTGTGTGTGAATTTTCTCACTGTGTAGCTTTGGCTGGCTTGGAATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGTGTGAATTTTCTCACTGTGTAGCTTTGGCTGGCTTGGAATTCT  300

seq1  TTTTTTTTTTTTTTTTTTAAGATTTATTTATTTATTATATGTTAGTACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTAAGATTTATTTATTTATTATATGTTAGTACAC  350

seq1  CTTAGCTATCTTCAGACACACCAGAAGAGGGCATCAGATCTCATTACAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCTATCTTCAGACACACCAGAAGAGGGCATCAGATCTCATTACAGG  400

seq1  TGGTTGTGAGCCACCATGTAGTTTCTGGGATTTGAACTCAGGACCTTCGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTGAGCCACCATGTAGTTTCTGGGATTTGAACTCAGGACCTTCGG  450

seq1  AAGAGCAGTCAGTGCTTTTAACCGCTGAACCATTTCTCCAGCCCCCAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCAGTCAGTGCTTTTAACCGCTGAACCATTTCTCCAGCCCCCAGCT  500

seq1  TGGAATTCTTGTATGGACCAGACTAGCCTCAAATTTGAAGAAGTCTGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTCTTGTATGGACCAGACTAGCCTCAAATTTGAAGAAGTCTGCCT  550

seq1  GTCTCTGCTTCCCAGAGATGAACTTTGGGGTCAAAGTGTGCACCACCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGCTTCCCAGAGATGAACTTTGGGGTCAAAGTGTGCACCACCATA  600

seq1  CCCAGTTCAGCCCTATGGTTTTGATTTTAGGATGTTAAAGCATTTTGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTTCAGCCCTATGGTTTTGATTTTAGGATGTTAAAGCATTTTGGGG  650

seq1  GAGCGGGGGTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAA  700
      |||||||||||||||||||||||||||||||||||||||||| | |||||
seq2  GAGCGGGGGTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGCCTTGGAA  700

seq1  CTCACTCTGTAGACCGGGCTGGCCTCGAACTCAGAAA-TCCGCCTGCCTT  749
       || || || |||||||||||| |||||||||| ||| ||||||||||||
seq2  ATCTCT-TGAAGACCGGGCTGGGCTCGAACTCAAAAATTCCGCCTGCCTT  749

seq1  TGCCTC-CCATTAAAGGCATGCACCA  774
      |||||| || ||||||||||||||||
seq2  TGCCTCTCCTTTAAAGGCATGCACCA  775