BAC Information

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BAC

Clone NameB6Ng01-154J15
Chromosome15 (Build37)
Map Location 52,906,156 - 53,046,944
singlet/doubletdoublet
Overlap geneExt1
Upstream geneLOC100039720, LOC665219, Slc30a8, LOC100039748, Thrap6, LOC100039745
Downstream geneSamd12, EG665097, EG621631
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154J15.bB6Ng01-154J15.g
ACCDH949603DH949604
length1,131306
definitionDH949603|Mus musculus domesticus DNA, BAC clone: B6Ng01-154J15, 5' end.DH949604|Mus musculus domesticus DNA, BAC clone: B6Ng01-154J15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(52,906,156 - 52,907,283)(53,046,639 - 53,046,944)
sequence
gaattccctctgttgatagcactctatccttctggacctcaagtcagtca
gaaaacttggtagccattaaattctgattaggtcaccattctgaatcagc
ttccaagtattgctgcaaggtggccactactcacaccatcgttcactccc
tggccccagtctaatgtccatctccatttggctcactcctttctaacagt
tcttcctgcctttgtcatctttctcattgactgttctcatcacgacatcc
agagtggatactgggaacacaaccctgaagtctgctctgttcaggccatg
cactgacccatccattagaggctcccaggcctcttggaccttctcatcca
ctgcaccatagtcactaatcccaatcttcttttccatcttcgtccattgt
tttactctgggtgtttcttcttgctattcccaatgctatctataacatcc
ttggctacctttctcttgctttgaagtttctgctcacttcccatctgtat
aacagaccatcctgaccactctccaaccttcctcatttctgcatctcacg
ctacttgactcttttgtcagtgtcttcttgctgtccctgatttccctgta
gcatttatatgtctctgttcactagcatatgagccctgcattgtcagaga
tgttttctgttttactcaaaggtgaacccaaaccacctagaacagtgact
gggatatttagggtatctcctcttaatattcagctacccaacctagttat
gagtgttatcggtatcttttggcttaactcaaaacactactttgccttaa
tatctaaaatacaataagccaagaagatttatagctcatatttgctaccc
caacaaaaatcaaacgggaatactgactaattttcgttcatgttgtaaac
tgggatttggccttaagctcctattaatgcagttgttagaaatcttcagc
tccgggctggtgaaatggctcagtgtgtagagcactcgactgctcttccg
aaggtccagagttcaaatccaagcaaacacgtggtgctacaacatctgga
acaagatctgactcctcttcttgagtgtctaagcgctacagtgaatttat
ataataattattaaaaatattaataaaaaaa
aaaattgatgtttctctaaaggttacctgtggaaagcagggaacttgagg
actacatgagagccttggctgtctctgtcctatgagctcagaagcactcg
agttgggggctcaaggacaggcctttcggaagtttctattgttcacagat
gaccttgcaatgagaccccttttcaatgctccaatatagaaatgttattt
tggagaagggatagccgtcttcacagagtacctgttcgtgaattttctct
aagaacaactgctgcttttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_52906156_52907283
seq2: B6Ng01-154J15.b_46_1176

seq1  GAATTCCCTCTGTTGATAGCACTCTATCCTTCTGGACCTCAAGTCAGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTCTGTTGATAGCACTCTATCCTTCTGGACCTCAAGTCAGTCA  50

seq1  GAAAACTTGGTAGCCATTAAATTCTGATTAGGTCACCATTCTGAATCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTTGGTAGCCATTAAATTCTGATTAGGTCACCATTCTGAATCAGC  100

seq1  TTCCAAGTATTGCTGCAAGGTGGCCACTACTCACACCATCGTTCACTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGTATTGCTGCAAGGTGGCCACTACTCACACCATCGTTCACTCCC  150

seq1  TGGCCCCAGTCTAATGTCCATCTCCATTTGGCTCACTCCTTTCTAACAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCCAGTCTAATGTCCATCTCCATTTGGCTCACTCCTTTCTAACAGT  200

seq1  TCTTCCTGCCTTTGTCATCTTTCTCATTGACTGTTCTCATCACGACATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTGCCTTTGTCATCTTTCTCATTGACTGTTCTCATCACGACATCC  250

seq1  AGAGTGGATACTGGGAACACAACCCTGAAGTCTGCTCTGTTCAGGCCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGATACTGGGAACACAACCCTGAAGTCTGCTCTGTTCAGGCCATG  300

seq1  CACTGACCCATCCATTAGAGGCTCCCAGGCCTCTTGGACCTTCTCATCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGACCCATCCATTAGAGGCTCCCAGGCCTCTTGGACCTTCTCATCCA  350

seq1  CTGCACCATAGTCACTAATCCCAATCTTCTTTTCCATCTTCGTCCATTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACCATAGTCACTAATCCCAATCTTCTTTTCCATCTTCGTCCATTGT  400

seq1  TTTACTCTGGGTGTTTCTTCTTGCTATTCCCAATGCTATCTATAACATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTCTGGGTGTTTCTTCTTGCTATTCCCAATGCTATCTATAACATCC  450

seq1  TTGGCTACCTTTCTCTTGCTTTGAAGTTTCTGCTCACTTCCCATCTGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTACCTTTCTCTTGCTTTGAAGTTTCTGCTCACTTCCCATCTGTAT  500

seq1  AACAGACCATCCTGACCACTCTCCAACCTTCCTCATTTCTGCATCTCACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACCATCCTGACCACTCTCCAACCTTCCTCATTTCTGCATCTCACG  550

seq1  CTACTTGACTCTTTTGTCAGTGTCTTCTTGCTGTCCCTGATTTCCCTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTGACTCTTTTGTCAGTGTCTTCTTGCTGTCCCTGATTTCCCTGTA  600

seq1  GCATTTATATGTCTCTGTTCACTAGCATATGAGCCCTGCATTGTCAGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTATATGTCTCTGTTCACTAGCATATGAGCCCTGCATTGTCAGAGA  650

seq1  TGTTTTCTGTTTTACTCAAAGGTGAACCCAAACCACCTAGAACAGTGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTGTTTTACTCAAAGGTGAACCCAAACCACCTAGAACAGTGACT  700

seq1  GGGATATTTA-GGTATCTCCTCTTAATATTCAGCTACCCAACCTAGTTAT  749
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GGGATATTTAGGGTATCTCCTCTTAATATTCAGCTACCCAACCTAGTTAT  750

seq1  GAGTGTTATCGGTATCTTTTGGCTTAACTCAAAACACTACTTTGCCTTAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTTATCGGTATCTTTTGGCTTAACTCAAAACACTACTTTGCCTTAA  800

seq1  TATCTAAAAATACAATAAGCCAAGAAGATTTATAGCTCATATTTGCTACC  849
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCT-AAAATACAATAAGCCAAGAAGATTTATAGCTCATATTTGCTACC  849

seq1  CCAACAAAAATCAAACGGGAATACTGACTAATTTTCGTTCATGTTGTAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAAAAATCAAACGGGAATACTGACTAATTTTCGTTCATGTTGTAAA  899

seq1  CT-GGATTTGGCCTAAAGCTCCTATTAATGCAGTTGTTAGAAATC-TCAG  947
      || ||||||||||| |||||||||||||||||||||||||||||| ||||
seq2  CTGGGATTTGGCCTTAAGCTCCTATTAATGCAGTTGTTAGAAATCTTCAG  949

seq1  CTCCGGGCTGGTGAGATGGCTCAGTGTGTAAGAGCACCCGACTGCTCTTC  997
      |||||||||||||| |||||||||||||| ||||||| ||||||||||||
seq2  CTCCGGGCTGGTGAAATGGCTCAGTGTGT-AGAGCACTCGACTGCTCTTC  998

seq1  CGAAGGTCCAGAGTTCAAATCCCAGCAACCACGTGGTGGCTCACAACCAT  1047
      |||||||||||||||||||||| ||||| |||||||| ||| |||| |||
seq2  CGAAGGTCCAGAGTTCAAATCCAAGCAAACACGTGGT-GCT-ACAA-CAT  1045

seq1  CTGTAACAAGATCTGACTCCCTCTTCTGGAGTGTCTGAAGACAGCTACAG  1097
      ||| |||||||||||||| |||||||| |||||||| |||   |||||||
seq2  CTGGAACAAGATCTGACT-CCTCTTCTTGAGTGTCT-AAG--CGCTACAG  1091

seq1  TGTATTTACAT-ATAAT------AAATA--AATAAAAAAA  1128
      || ||||| || |||||      |||||  ||||||||||
seq2  TGAATTTATATAATAATTATTAAAAATATTAATAAAAAAA  1131

seq1: chr15_53046639_53046944
seq2: B6Ng01-154J15.g_72_377 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACAAAAGCAGCAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACAAAAGCAGCAGTT  50

seq1  GTTCTTAGAGAAAATTCACGAACAGGTACTCTGTGAAGACGGCTATCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTAGAGAAAATTCACGAACAGGTACTCTGTGAAGACGGCTATCCCT  100

seq1  TCTCCAAAATAACATTTCTATATTGGAGCATTGAAAAGGGGTCTCATTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAAAATAACATTTCTATATTGGAGCATTGAAAAGGGGTCTCATTGC  150

seq1  AAGGTCATCTGTGAACAATAGAAACTTCCGAAAGGCCTGTCCTTGAGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCATCTGTGAACAATAGAAACTTCCGAAAGGCCTGTCCTTGAGCCC  200

seq1  CCAACTCGAGTGCTTCTGAGCTCATAGGACAGAGACAGCCAAGGCTCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTCGAGTGCTTCTGAGCTCATAGGACAGAGACAGCCAAGGCTCTCA  250

seq1  TGTAGTCCTCAAGTTCCCTGCTTTCCACAGGTAACCTTTAGAGAAACATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTCCTCAAGTTCCCTGCTTTCCACAGGTAACCTTTAGAGAAACATC  300

seq1  AATTTT  306
      ||||||
seq2  AATTTT  306