BAC Information

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BAC

Clone NameB6Ng01-154J19
Chromosome15 (Build37)
Map Location 35,699,933 - 35,809,299
singlet/doubletdoublet
Overlap geneVps13b
Upstream geneKcns2, Stk3, Osr2, EG666183
Downstream geneCox6c, Rgs22, Fbxo43, 1700074I03Rik, Polr2k, Spag1, Rnf19, LOC670773, EG268795, EG545101, Ankrd46, 4631426E05Rik, Pabpc1, LOC626746, Ywhaz
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154J19.bB6Ng01-154J19.g
ACCDH949611DH949612
length7291,183
definitionDH949611|Mus musculus domesticus DNA, BAC clone: B6Ng01-154J19, 5' end.DH949612|Mus musculus domesticus DNA, BAC clone: B6Ng01-154J19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,699,933 - 35,700,661)(35,808,108 - 35,809,299)
sequence
gaattctgttaccttgggagaccaaatggcagttttgggtaggtgccaca
ctggaaagcctcctccagcttgctgtagagcctaagggcagaggtagaaa
cccctgtgtgggtgtgggccttgtatgagtggccagcagaccaggtgggt
aggcagcgcagaggtatgtcccttcagtcagctctgagaagagggacaag
tgaaagatcacagagctttgtactttgattagtatttaactggggagctc
cagtcaccctgtttcctttttcttgtagctgacatctacttggatgtatc
aaagcctttgaaagcaaacttaagttttaccaaactcgatcagataaatc
attttttaaagaagataaaaaaggcacacagctctgcacatagcaaagag
acctccaccccgtcagactctatactgaatatggatgagcctcctgtccc
caaatgttaccgtggaaagttgtcaaagaccaaagttcactgtgatgaag
cacagaagacatcatttcaagaaaacatttggagagccatctcctgcttt
caaaaagtttctgtccatactacccaaatcgtggtctccatggaaactgt
cccgcaccctcataagccatgtgtgttagcatcactgtcaaacctcaatg
gaagccttactgtcaaagcagcacaaaaagtacctggtaagttacagaaa
gggggtagggtggaatggagggaggagga
gaattccaaagacttaaaaactgaaaggtttcatctcatttgacatcaga
agaatatgcaacattacgcctatacaggctaacattccaattccataagg
taactgcatctgattacttcaagaaataggaaaaatacaattgaaaaaag
atgtttataaactggaacttctgaaattgttctccactagaaaatagttt
ttgaagattttcttataaatttatattgctttttgaaatgggttagcttt
ataaagtctctggtggcagactatgcagtctttctgtgaatttttagttt
gtagtcagaattttccacccatgacactaatgattctatggtgttataat
taacaagtgatatgtacaattatacacatctacgtacagttacaaggcac
cggcagggtggtggattagtgtttaatgcagctgctatgcttgtcagatc
ccttgtacacaatgggaatgtaaggagtatgtgtcatcagatgcagtggt
gatttagccaggagtactgctgatgaggaaaagcacatctgaaaaatgtt
taagtatcaaagaacattccataccctttatgtatgcacctaccaggtca
gttttccataaggaattcatcctgttaagatgtacgtgtaacctcagaat
ataatctagttattgagagaaaagaatatgctagttttaagttattttac
ctgaaaattaggaggaataataattttgccagcaggaacttgtagaacaa
tcttctctccttcaaacagccagagatcccacttggactgattgataagc
agggcccagggtagcagttctatcaacagggttctaacatatggtttcca
gattgacagtttgactcgcattgggctatcccactgactcagctgctcat
tcctggtccaaagaacacattcaagtgactcagtgaactatgatgagttc
agatttatacagtatgtctgagcattccagacacacatgctcccacagaa
gccactgtgcagacagcagcgcacagcagcctcaccaggttgcacttgca
agcagagaaaagcagctttcacgtaatgatgctttcctctttgagataaa
gcatccattaggcttaacgactaggatgacatcggattcgatgcatatca
aagctctcttcaaggcatttacctccctctagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_35699933_35700661
seq2: B6Ng01-154J19.b_44_772

seq1  GAATTCTGTTACCTTGGGAGACCAAATGGCAGTTTTGGGTAGGTGCCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTACCTTGGGAGACCAAATGGCAGTTTTGGGTAGGTGCCACA  50

seq1  CTGGAAAGCCTCCTCCAGCTTGCTGTAGAGCCTAAGGGCAGAGGTAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAAGCCTCCTCCAGCTTGCTGTAGAGCCTAAGGGCAGAGGTAGAAA  100

seq1  CCCCTGTGTGGGTGTGGGCCTTGTATGAGTGGCCAGCAGACCAGGTGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGTGTGGGTGTGGGCCTTGTATGAGTGGCCAGCAGACCAGGTGGGT  150

seq1  AGGCAGCGCAGAGGTATGTCCCTTCAGTCAGCTCTGAGAAGAGGGACAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCGCAGAGGTATGTCCCTTCAGTCAGCTCTGAGAAGAGGGACAAG  200

seq1  TGAAAGATCACAGAGCTTTGTACTTTGATTAGTATTTAACTGGGGAGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGATCACAGAGCTTTGTACTTTGATTAGTATTTAACTGGGGAGCTC  250

seq1  CAGTCACCCTGTTTCCTTTTTCTTGTAGCTGACATCTACTTGGATGTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACCCTGTTTCCTTTTTCTTGTAGCTGACATCTACTTGGATGTATC  300

seq1  AAAGCCTTTGAAAGCAAACTTAAGTTTTACCAAACTCGATCAGATAAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTTTGAAAGCAAACTTAAGTTTTACCAAACTCGATCAGATAAATC  350

seq1  ATTTTTTAAAGAAGATAAAAAAGGCACACAGCTCTGCACATAGCAAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTAAAGAAGATAAAAAAGGCACACAGCTCTGCACATAGCAAAGAG  400

seq1  ACCTCCACCCCGTCAGACTCTATACTGAATATGGATGAGCCTCCTGTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCACCCCGTCAGACTCTATACTGAATATGGATGAGCCTCCTGTCCC  450

seq1  CAAATGTTACCGTGGAAAGTTGTCAAAGACCAAAGTTCACTGTGATGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTTACCGTGGAAAGTTGTCAAAGACCAAAGTTCACTGTGATGAAG  500

seq1  CACAGAAGACATCATTTCAAGAAAACATTTGGAGAGCCATCTCCTGCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAGACATCATTTCAAGAAAACATTTGGAGAGCCATCTCCTGCTTT  550

seq1  CAAAAAGTTTCTGTCCATACTACCCAAATCGTGGTCTCCATGGAAACTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGTTTCTGTCCATACTACCCAAATCGTGGTCTCCATGGAAACTGT  600

seq1  CCCGCACCCTCATAAGCCATGTGTGTTAGCATCACTGTCAAACCTCAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCACCCTCATAAGCCATGTGTGTTAGCATCACTGTCAAACCTCAATG  650

seq1  GAAGCCTTACTGTCAAAGCAGCACAAAAAGTACCTGGTAAGTTACAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCTTACTGTCAAAGCAGCACAAAAAGTACCTGGTAAGTTACAGAAA  700

seq1  GGGGGTAGGGTGGAATGGAGGGAGGAGGA  729
      |||||||||||||||||||||||||||||
seq2  GGGGGTAGGGTGGAATGGAGGGAGGAGGA  729

seq1: chr15_35808108_35809299
seq2: B6Ng01-154J19.g_67_1249 (reverse)

seq1  GCTAGAGAGA-GTAAATGCCATGGAGCAGAGCCTTTGA-ATGCATCGGAT  48
      ||||||| || ||||||||| || || |||| |||||| ||||||| || 
seq2  GCTAGAGGGAGGTAAATGCCTTGAAG-AGAG-CTTTGATATGCATC-GAA  47

seq1  TCTGATGTCAT-CTAGTTTGGTTTAGCCTAATGGATGCTTTTACTCAAAG  97
      || |||||||| ||||  | ||| |||||||||||||||||  |||||||
seq2  TCCGATGTCATCCTAG--TCGTTAAGCCTAATGGATGCTTTATCTCAAAG  95

seq1  AGGAAAGCATCATTACGTGAAAAGCTGCTTTCTCCTGCTTGCAAGTGCAA  147
      ||||||||||||||||||| |||||||||||   ||||||||||||||||
seq2  AGGAAAGCATCATTACGTG-AAAGCTGCTTTTCTCTGCTTGCAAGTGCAA  144

seq1  CCCTGGGTGAGGCTGCTGTGCGCTGCTGTCCTGCACAGTGGCTTCCTGTG  197
      ||   |||||||||||||||||||||||| |||||||||||||| |||||
seq2  CC--TGGTGAGGCTGCTGTGCGCTGCTGT-CTGCACAGTGGCTT-CTGTG  190

seq1  GGAGCATTGTGTGTCTGGAATGCTCAGACATACTGTATAAATCCTGAACT  247
      |||||| ||||||||||||||||||||||||||||||||||| |||||||
seq2  GGAGCA-TGTGTGTCTGGAATGCTCAGACATACTGTATAAAT-CTGAACT  238

seq1  CATCATAGTTCACTGAGTCACTTGAATGTGTTCTTTGGACCAGGAATGAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATAGTTCACTGAGTCACTTGAATGTGTTCTTTGGACCAGGAATGAG  288

seq1  CAGCTGAGTCAGTGGGATAGCCCAATGCGAGTCAAACTGTCAATCTGGAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGAGTCAGTGGGATAGCCCAATGCGAGTCAAACTGTCAATCTGGAA  338

seq1  ACCATATGTTAGAACCCTGTTGATAGAACTGCTACCCTGGGCCCTGCTTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATATGTTAGAACCCTGTTGATAGAACTGCTACCCTGGGCCCTGCTTA  388

seq1  TCAATCAGTCCAAGTGGGATCTCTGGCTGTTTGAAGGAGAGAAGATTGTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCAGTCCAAGTGGGATCTCTGGCTGTTTGAAGGAGAGAAGATTGTT  438

seq1  CTACAAGTTCCTGCTGGCAAAATTATTATTCCTCCTAATTTTCAGGTAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAGTTCCTGCTGGCAAAATTATTATTCCTCCTAATTTTCAGGTAAA  488

seq1  ATAACTTAAAACTAGCATATTCTTTTCTCTCAATAACTAGATTATATTCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTAAAACTAGCATATTCTTTTCTCTCAATAACTAGATTATATTCT  538

seq1  GAGGTTACACGTACATCTTAACAGGATGAATTCCTTATGGAAAACTGACC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTACACGTACATCTTAACAGGATGAATTCCTTATGGAAAACTGACC  588

seq1  TGGTAGGTGCATACATAAAGGGTATGGAATGTTCTTTGATACTTAAACAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGGTGCATACATAAAGGGTATGGAATGTTCTTTGATACTTAAACAT  638

seq1  TTTTCAGATGTGCTTTTCCTCATCAGCAGTACTCCTGGCTAAATCACCAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGATGTGCTTTTCCTCATCAGCAGTACTCCTGGCTAAATCACCAC  688

seq1  TGCATCTGATGACACATACTCCTTACATTCCCATTGTGTACAAGGGATCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTGATGACACATACTCCTTACATTCCCATTGTGTACAAGGGATCT  738

seq1  GACAAGCATAGCAGCTGCATTAAACACTAATCCACCACCCTGCCGGTGCC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGCATAGCAGCTGCATTAAACACTAATCCACCACCCTGCCGGTGCC  788

seq1  TTGTAACTGTACGTAGATGTGTATAATTGTACATATCACTTGTTAATTAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAACTGTACGTAGATGTGTATAATTGTACATATCACTTGTTAATTAT  838

seq1  AACACCATAGAATCATTAGTGTCATGGGTGGAAAATTCTGACTACAAACT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCATAGAATCATTAGTGTCATGGGTGGAAAATTCTGACTACAAACT  888

seq1  AAAAATTCACAGAAAGACTGCATAGTCTGCCACCAGAGACTTTATAAAGC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTCACAGAAAGACTGCATAGTCTGCCACCAGAGACTTTATAAAGC  938

seq1  TAACCCATTTCAAAAAGCAATATAAATTTATAAGAAAATCTTCAAAAACT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCATTTCAAAAAGCAATATAAATTTATAAGAAAATCTTCAAAAACT  988

seq1  ATTTTCTAGTGGAGAACAATTTCAGAAGTTCCAGTTTATAAACATCTTTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTAGTGGAGAACAATTTCAGAAGTTCCAGTTTATAAACATCTTTT  1038

seq1  TTCAATTGTATTTTTCCTATTTCTTGAAGTAATCAGATGCAGTTACCTTA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTGTATTTTTCCTATTTCTTGAAGTAATCAGATGCAGTTACCTTA  1088

seq1  TGGAATTGGAATGTTAGCCTGTATAGGCGTAATGTTGCATATTCTTCTGA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTGGAATGTTAGCCTGTATAGGCGTAATGTTGCATATTCTTCTGA  1138

seq1  TGTCAAATGAGATGAAACCTTTCAGTTTTTAAGTCTTTGGAATTC  1192
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAATGAGATGAAACCTTTCAGTTTTTAAGTCTTTGGAATTC  1183