BAC Information

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BAC

Clone NameB6Ng01-154K13
Chromosome15 (Build37)
Map Location 29,512,061 - 29,587,006
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040675, LOC100040689, LOC100040702, LOC667153
Downstream geneLOC382975, Ctnnd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154K13.bB6Ng01-154K13.g
ACCDH949645DH949646
length1,0421,095
definitionDH949645|Mus musculus domesticus DNA, BAC clone: B6Ng01-154K13, 5' end.DH949646|Mus musculus domesticus DNA, BAC clone: B6Ng01-154K13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,512,061 - 29,513,101)(29,585,899 - 29,587,006)
sequence
gaattcagtcctgtatatatttggtaatttttagaaaaccaaaagaccca
ctaaatatatctgcactgtttgttgaacagattgacaggagatgtagaaa
cacactaatcctattgtctctgttcacatactccgtggtggtcagcacta
agtgcttgttgctatggggctccctagaaatcaatttaatttattgtcct
ttacaagaataacttttttttttcattcagtcttttctttgggtcaacac
tgctttaaattaccattttaatctttttgctcagtgtgtgccattgcata
atttcacgatttttaaaaccagaattagaatattatcattgcaaatcagt
ttcttttcatccaccttcccaaaatattcaccaaacaaaaatgtttgagt
cacttaaaaaaaaaaatctcatttctcaacttctagtaccaatgagtaac
tctgtactggaaccacacatattgtttattagtattttatatcaatatct
tctttatttgaacattataaggccagtaagactcaaatcagatatcctct
ggtgagattgagagaaacctcaagaattatgtcaacagagaagcaaagaa
ggttaaagttaggaaaagcaaactgccaagcttctgccagagttatcccc
tgcttctgacactctctgattactgatcttcaaatccacaggtagtgagg
actgtatggcatttaagtctagaatggcaaactcttatctgttaaacctt
tgcttacttacagcttgaggcactcacttgtcaacaccatgagctggatt
tatagccaccgtagagtgcttgactaaatgacatacatttccccaaactg
cttcactaaataaaccatatttttggagaatcaaaaatattcatatagga
gaataaattacccaggcattttaattctatttatatgggaatcaaagtaa
ataagacaaaataatatcacaaaagatccactcaggaaaaaagtccctgt
taaaattctgggtgcaatctcaggatcaataagtaatgtgtg
gaattccctgactgggaaagttctttttttacaaataaataaatagtcaa
attgcttaaagtagttggctgctgttgagggtctggtaaatgtggagact
gaggcaagctctttggtccaatttgttaaacttctaaagcacacaaatat
tcatttttcatttctttatataaacatcatatttttcctgagtgtataat
ttcttctaacacctggatgaagatattaaaataaacacaggattactttg
agctactgcagctttgtcacataagttgaaattgtgtggtgcattcttta
gatttttcacctcatatacatatatgtatacatatgtttggaactaggta
atatcatttatttatctttcccgttgacggcatctttcgcttattttcca
tttaagaattggtaagtcaggggcacagatgacccattaaaattcagtcc
tgtaaattcccttgctagaatatattttaccacaactgatttgcataggt
gatttattacccagccagtggttgctggaagtattccgagaaggccacaa
cttaatgaaggggaatttattttccggtccttgaaaatgtgataattgtt
tatagctggtttaacacaaacctctgagaggagtcaaatttccttgctca
caggattgaatgtcaagatgtgttgccatctctctcctttatggacactt
actctactgcaaagttaggattggtaaagcttttacaaagcagcacgctg
catgcactaacatcttattgtagtaattttattgtctcggtcatcataac
aaaaatactaaacaaaacactgaaagcatagttacattgaagcctaaagt
aattaaaacattccctccttcttagagtctgctcctgtcaactacaggtg
taagttcttcaagaaggattaaacatttctgtctaaatatatattaattc
ttcaggaaagaaatacaaactggaatattatatctttatgacgtattttc
caattcagccttgctttagaaaaagatgttgaccttgtgttttattttag
acttcagaaatattttaacttctttgaattaactggactggtgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_29512061_29513101
seq2: B6Ng01-154K13.b_46_1087

seq1  GAATTCAGTCCTGTATATATTTGGTAATTTTTAGAAAACCAAAAGACCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCCTGTATATATTTGGTAATTTTTAGAAAACCAAAAGACCCA  50

seq1  CTAAATATATCTGCACTGTTTGTTGAACAGATTGACAGGAGATGTAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATATATCTGCACTGTTTGTTGAACAGATTGACAGGAGATGTAGAAA  100

seq1  CACACTAATCCTATTGTCTCTGTTCACATACTCCGTGGTGGTCAGCACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTAATCCTATTGTCTCTGTTCACATACTCCGTGGTGGTCAGCACTA  150

seq1  AGTGCTTGTTGCTATGGGGCTCCCTAGAAATCAATTTAATTTATTGTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTGTTGCTATGGGGCTCCCTAGAAATCAATTTAATTTATTGTCCT  200

seq1  TTACAAGAATAACTTTTTTTTTTCATTCAGTCTTTTCTTTGGGTCAACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAGAATAACTTTTTTTTTTCATTCAGTCTTTTCTTTGGGTCAACAC  250

seq1  TGCTTTAAATTACCATTTTAATCTTTTTGCTCAGTGTGTGCCATTGCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTAAATTACCATTTTAATCTTTTTGCTCAGTGTGTGCCATTGCATA  300

seq1  ATTTCACGATTTTTAAAACCAGAATTAGAATATTATCATTGCAAATCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCACGATTTTTAAAACCAGAATTAGAATATTATCATTGCAAATCAGT  350

seq1  TTCTTTTCATCCACCTTCCCAAAATATTCACCAAACAAAAATGTTTGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCATCCACCTTCCCAAAATATTCACCAAACAAAAATGTTTGAGT  400

seq1  CACTTAAAAAAAAAAATCTCATTTCTCAACTTCTAGTACCAATGAGTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAAAAAAAAAAATCTCATTTCTCAACTTCTAGTACCAATGAGTAAC  450

seq1  TCTGTACTGGAACCACACATATTGTTTATTAGTATTTTATATCAATATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTACTGGAACCACACATATTGTTTATTAGTATTTTATATCAATATCT  500

seq1  TCTTTATTTGAACATTATAAGGCCAGTAAGACTCAAATCAGATATCCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATTTGAACATTATAAGGCCAGTAAGACTCAAATCAGATATCCTCT  550

seq1  GGTGAGATTGAGAGAAACCTCAAGAATTATGTCAACAGAGAAGCAAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGATTGAGAGAAACCTCAAGAATTATGTCAACAGAGAAGCAAAGAA  600

seq1  GGTTAAAGTTAGGAAAAGCAAACTGCCAAGCTTCTGCCAGAGTTATCCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAAGTTAGGAAAAGCAAACTGCCAAGCTTCTGCCAGAGTTATCCCC  650

seq1  TGCTTCTGACACTCTCTGATTACTGATCTTCAAATCCACAGGTAGTGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTGACACTCTCTGATTACTGATCTTCAAATCCACAGGTAGTGAGG  700

seq1  ACTGTATGGCATTTAAGTCTAGAATGGCAAACTCTTATCTGTTAAACCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTATGGCATTTAAGTCTAGAATGGCAAACTCTTATCTGTTAAACCTT  750

seq1  TGCTTACTTACAGCTTGAGGCACTCACTTGTCAACACCATGAGCTGGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTACTTACAGCTTGAGGCACTCACTTGTCAACACCATGAGCTGGATT  800

seq1  TATAGCCACCGTAGAGTGCTTGACTAAATGACATACATTTCCCCAAACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCCACCGTAGAGTGCTTGACTAAATGACATACATTTCCCCAAACTG  850

seq1  CTTCACTAAATAAACCATATTTTTGGAGAATCAAAAATATTCATATAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTAAATAAACCATATTTTTGGAGAATCAAAAATATTCATATAGGA  900

seq1  GAATAAATTACCCAGGCA-TTTAATTCTATTTATATGGAAATCAAAGTAA  949
      |||||||||||||||||| ||||||||||||||||||| |||||||||||
seq2  GAATAAATTACCCAGGCATTTTAATTCTATTTATATGGGAATCAAAGTAA  950

seq1  ATAAGGACAAAATAAATATCACAAAAGAACCACCAAGAAAAAAAGTCACT  999
      |||| |||||||| |||||||||||||| ||||  || ||||||||| ||
seq2  ATAA-GACAAAAT-AATATCACAAAAGATCCACTCAGGAAAAAAGTCCCT  998

seq1  GTTAAAATTCT-GGTGCAATCTCAGGAATCAT-AGTAATGTGTG  1041
      ||||||||||| |||||||||||||||   || |||||||||||
seq2  GTTAAAATTCTGGGTGCAATCTCAGGATCAATAAGTAATGTGTG  1042

seq1: chr15_29585899_29587006
seq2: B6Ng01-154K13.g_70_1164 (reverse)

seq1  GTCACCATGT----TAAAATCAAAGAAGTTTTAAAAATTATTTTCCTGAA  46
      ||||||| ||    | || |||||||||||    ||| |||||  |||||
seq2  GTCACCA-GTCCAGTTAATTCAAAGAAGTT----AAAATATTT--CTGAA  43

seq1  GTCTATAAATAAAACACAAGGTCAAACATTCTTTTTTCTAAAAGCCAAGG  96
      ||||| ||||||||||||||||| |||||   ||||||||||   |||||
seq2  GTCTA-AAATAAAACACAAGGTC-AACAT--CTTTTTCTAAA--GCAAGG  87

seq1  CTGAATGGGAAAATACGTCATTAAAGATATAAATATTCCAGTTTGTATTT  146
      |||||| ||||||||||||| ||||||||| |||||||||||||||||||
seq2  CTGAATTGGAAAATACGTCA-TAAAGATAT-AATATTCCAGTTTGTATTT  135

seq1  CTTTCCTGAAGAATTAATATATATTTAGAACAGAAATGTTTAATTCCTTC  196
      |||||||||||||||||||||||||||| |||||||||||||| ||||||
seq2  CTTTCCTGAAGAATTAATATATATTTAG-ACAGAAATGTTTAA-TCCTTC  183

seq1  TTGAAGAACTTACACCTGTAGTTGACAGGAGCAGACTCTAAGAAGGAGGG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGAACTTACACCTGTAGTTGACAGGAGCAGACTCTAAGAAGGAGGG  233

seq1  AATGTTTTTAATTAC-TTAGGCTTCAATGTAACTATGCTTTCAGTGTTTT  295
      |||| |||||||||| ||||||||||||||||||||||||||||||||||
seq2  AATG-TTTTAATTACTTTAGGCTTCAATGTAACTATGCTTTCAGTGTTTT  282

seq1  GTTTAGTATTTTTGTTATGATGACCGAGACAATAAAATTACTACAATAAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGTATTTTTGTTATGATGACCGAGACAATAAAATTACTACAATAAG  332

seq1  ATGTTAGTGCATGCAGCGTGCTGCTTTGTAAAAGCTTTACCAATCCTAAC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAGTGCATGCAGCGTGCTGCTTTGTAAAAGCTTTACCAATCCTAAC  382

seq1  TTTGCAGTAGAGTAAGTGTCCATAAAGGAGAGAGATGGCAACACATCTTG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGTAGAGTAAGTGTCCATAAAGGAGAGAGATGGCAACACATCTTG  432

seq1  ACATTCAATCCTGTGAGCAAGGAAATTTGACTCCTCTCAGAGGTTTGTGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCAATCCTGTGAGCAAGGAAATTTGACTCCTCTCAGAGGTTTGTGT  482

seq1  TAAACCAGCTATAAACAATTATCACATTTTCAAGGACCGGAAAATAAATT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCAGCTATAAACAATTATCACATTTTCAAGGACCGGAAAATAAATT  532

seq1  CCCCTTCATTAAGTTGTGGCCTTCTCGGAATACTTCCAGCAACCACTGGC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTCATTAAGTTGTGGCCTTCTCGGAATACTTCCAGCAACCACTGGC  582

seq1  TGGGTAATAAATCACCTATGCAAATCAGTTGTGGTAAAATATATTCTAGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAATAAATCACCTATGCAAATCAGTTGTGGTAAAATATATTCTAGC  632

seq1  AAGGGAATTTACAGGACTGAATTTTAATGGGTCATCTGTGCCCCTGACTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAATTTACAGGACTGAATTTTAATGGGTCATCTGTGCCCCTGACTT  682

seq1  ACCAATTCTTAAATGGAAAATAAGCGAAAGATGCCGTCAACGGGAAAGAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATTCTTAAATGGAAAATAAGCGAAAGATGCCGTCAACGGGAAAGAT  732

seq1  AAATAAATGATATTACCTAGTTCCAAACATATGTATACATATATGTATAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATGATATTACCTAGTTCCAAACATATGTATACATATATGTATAT  782

seq1  GAGGTGAAAAATCTAAAGAATGCACCACACAATTTCAACTTATGTGACAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGAAAAATCTAAAGAATGCACCACACAATTTCAACTTATGTGACAA  832

seq1  AGCTGCAGTAGCTCAAAGTAATCCTGTGTTTATTTTAATATCTTCATCCA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCAGTAGCTCAAAGTAATCCTGTGTTTATTTTAATATCTTCATCCA  882

seq1  GGTGTTAGAAGAAATTATACACTCAGGAAAAATATGATGTTTATATAAAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTAGAAGAAATTATACACTCAGGAAAAATATGATGTTTATATAAAG  932

seq1  AAATGAAAAATGAATATTTGTGTGCTTTAGAAGTTTAACAAATTGGACCA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAAAATGAATATTTGTGTGCTTTAGAAGTTTAACAAATTGGACCA  982

seq1  AAGAGCTTGCCTCAGTCTCCACATTTACCAGACCCTCAACAGCAGCCAAC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTTGCCTCAGTCTCCACATTTACCAGACCCTCAACAGCAGCCAAC  1032

seq1  TACTTTAAGCAATTTGACTATTTATTTATTTGTAAAAAAAGAACTTTCCC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTAAGCAATTTGACTATTTATTTATTTGTAAAAAAAGAACTTTCCC  1082

seq1  AGTCAGGGAATTC  1108
      |||||||||||||
seq2  AGTCAGGGAATTC  1095