BAC Information

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BAC

Clone NameB6Ng01-154M04
Chromosome15 (Build37)
Map Location 76,550,996 - 76,653,158
singlet/doubletdoublet
Overlap geneLrrc24, C030006K11Rik, D15Wsu169e
Upstream geneMafa, Zc3h3, LOC672572, Gsdmdc1, Naprt1, Eef1d, Tigd5, Pycrl, Tsta3, Zfp623, Eif2s3x-ps1, Zfp707, 2410075B13Rik, Mapk15, AA409316, K230010J24Rik, Scrib, 2410104I19Rik, Nrbp2, Eppk1, BC024139, Plec1, LOC671535, Grina, Spatc1, LOC100041269, Oplah, Exosc4, Gpaa1, Cyc1, Sharpin, Maf1, EG626280, Brp16, Tssk5, Bop1, Scx, Hsf1, Dgat1, Scrt1, LOC666497, EG666504, Fbxl6, Gpr172b, Adck5, Cpsf1, Slc39a4, Vps28, Nfkbil2, Cyhr1, Kifc2, Foxh1, Ppp1r16a, Gpt1, Mfsd3, Recql4, Lrrc14
Downstream geneZfp251, Zfp7, Commd5, Rpl8, Zfp647, 1110038F14Rik, Mb, Apol6, Rbm9, LOC100042318, Apol3, BC020489, BC085284, LOC624454, EG666639, 9030421J09Rik, EG626615, 2210421G13Rik, 9130218O11Rik, LOC666661, A330102K04Rik, EG545115, LOC666348, LOC666679, 2310016F22Rik, Apol2, Myh9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154M04.bB6Ng01-154M04.g
ACCDH949719DH949720
length1,123912
definitionDH949719|Mus musculus domesticus DNA, BAC clone: B6Ng01-154M04, 5' end.DH949720|Mus musculus domesticus DNA, BAC clone: B6Ng01-154M04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,550,996 - 76,552,136)(76,652,248 - 76,653,158)
sequence
gaattcacacccagccctacccccactaagacaggttctctttctctgtg
tccatgactgtcctgaaactctagtaaaacaggctggccttgaactcaga
gatccacctgcccctgcctctttagtacagattaaagacctgggcctcca
tacctgactgttacttctaattgttttgagccagggtcttgctatacttg
gactggagatcctctaatcatgcttccaagtggcgagatcacagggttgc
accaccacacctggctttcccgggtgattttagagaacagagggataaga
caaacaacaggaaaatcatgccttggccccacagctggttcgaagcgggg
gctgtgtctttggagtagaggaaggtatgtgtcacatctggctgggatgt
ggggaaaaacctcaggtcatccgctggtttctaactttcttctttcctcc
ctctggggattggcctcagtctctcccgcacaccagtcacaggctttaag
cacacaatacactgagttccactcctatcaccgcaactgggtacctagct
ttctaagaatgtgggagcagtgacctctgaaactgtcaagaaatgcactc
tacaggttactgcatgtccctgggtacctagagacaggaggactggggtc
tagttctagccacgatgagctcagttttaatggtgatgcccgaagctgag
aagccttaaggaagataggaccaagggtgcactgttctctagtctccagc
ctcatttggcatggtctagtgttttaatactcgccgattcaccaggtctt
ctttgctctgagtcaagttgaattgtactaagtggccttggtgtttgtct
caattttgcaccaattgtaagtcacatgatcatttaaagtcatagagatg
aggcagcacagcagtaaagttttaatggaatagctttggcgcaggcaaag
gcagttcctagatctcagacatgtggagcccaagaagtggggacgcttgc
taggtttctgggttttatttctgacacgatgactggtggtccctggctca
ggcttgcacagctgttcagcttcagtagcaagcttgatctgtgcatagga
tcaggctgctgcttatggaggcc
gaattctcctttttctcttttcattcagccagggatcctagctcatgtca
tgataccatccattttcaggcccaggtttccttccttaatcttcttagga
aacaccctcacagaagtgcccagaggtatgtatcactaatgtcacgaggt
ggggggtggggcacatcttcctcctcctcttcctccccccttccacctcc
accccttcttccttttcctcttcctcttcttttctttaagccaggattat
gttaggcagtcctggctagcctagaatatactacgtagataaggctgacc
tcattgagatccacctgcctctgcctcccaagtgctgggatcaaagggag
gtgccaccatgcccagaattgggacatttcttaatcctccccacttgaca
atttaagcatcagaactcctctcaacaaaggccattcgaccataaggtaa
ggtgttgaatgttccccagaggtaaagacaaaggtgataatggacgaagg
cactgtattcaacaagtaacctaaacaggaatgtgtctgtgcataattgt
gaacaagggaagaccaaaacacggtgatactgaggtgctaggcttgtttt
tccaggacacagtcaccaaagaaataagagtatggtagggtgcataggat
aggaagtaatggagggattttgtttttacaaagaataatgtgagagggta
ctcaggctttatcttatgtatttatttacttttttaaaggtttatttatt
tatttatttaatgtatatgggtacactgtagctgaacattgggttgtgag
ccttcatgtgggttgtttaggaattgaatttttagcacctctgcttgctc
agatcaacccagctcgctccagcccaagatttatttattgttatacataa
gtacactgtagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_76550996_76552136
seq2: B6Ng01-154M04.b_43_1165

seq1  GAATTCACACCCAGCCCTACCCCCACTAAGACAGGTTCTCTTTCTCTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACCCAGCCCTACCCCCACTAAGACAGGTTCTCTTTCTCTGTG  50

seq1  TCCATGACTGTCCTGAAACTCTAGTAAAACAGGCTGGCCTTGAACTCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGACTGTCCTGAAACTCTAGTAAAACAGGCTGGCCTTGAACTCAGA  100

seq1  GATCCACCTGCCCCTGCCTCTTTAGTACAGATTAAAGACCTGGGCCTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCACCTGCCCCTGCCTCTTTAGTACAGATTAAAGACCTGGGCCTCCA  150

seq1  TACCTGACTGTTACTTCTAATTGTTTTGAGCCAGGGTCTTGCTATACTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGACTGTTACTTCTAATTGTTTTGAGCCAGGGTCTTGCTATACTTG  200

seq1  GACTGGAGATCCTCTAATCATGCTTCCAAGTGGCGAGATCACAGGGTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGAGATCCTCTAATCATGCTTCCAAGTGGCGAGATCACAGGGTTGC  250

seq1  ACCACCACACCTGGCTTTCCCGGGTGATTTTAGAGAACAGAGGGATAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCACACCTGGCTTTCCCGGGTGATTTTAGAGAACAGAGGGATAAGA  300

seq1  CAAACAACAGGAAAATCATGCCTTGGCCCCACAGCTGGTTCGAAGCGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAACAGGAAAATCATGCCTTGGCCCCACAGCTGGTTCGAAGCGGGG  350

seq1  GCTGTGTCTTTGGAGTAGAGGAAGGTATGTGTCACATCTGGCTGGGATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTCTTTGGAGTAGAGGAAGGTATGTGTCACATCTGGCTGGGATGT  400

seq1  GGGGAAAAACCTCAGGTCATCCGCTGGTTTCTAACTTTCTTCTTTCCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAAACCTCAGGTCATCCGCTGGTTTCTAACTTTCTTCTTTCCTCC  450

seq1  CTCTGGGGATTGGCCTCAGTCTCTCCCGCACACCAGTCACAGGCTTTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGGATTGGCCTCAGTCTCTCCCGCACACCAGTCACAGGCTTTAAG  500

seq1  CACACAATACACTGAGTTCCACTCCTATCACCGCAACTGGGTACCTAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAATACACTGAGTTCCACTCCTATCACCGCAACTGGGTACCTAGCT  550

seq1  TTCTAAGAATGTGGGAGCAGTGACCTCTGAAACTGTCAAGAAATGCACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGAATGTGGGAGCAGTGACCTCTGAAACTGTCAAGAAATGCACTC  600

seq1  TACAGGTTACTGCATGTCCCTGGGTACCTAGAGACAGGAGGACTGGGGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGTTACTGCATGTCCCTGGGTACCTAGAGACAGGAGGACTGGGGTC  650

seq1  TAGTTCTAGCCACGATGAGCTCAGTTTTAATGGTGATGCCCGAAGCTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTAGCCACGATGAGCTCAGTTTTAATGGTGATGCCCGAAGCTGAG  700

seq1  AAGCCTTAAGGAAGATAGGACCAAGGGTGCACTGTTCTCTAGTCTCCAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTAAGGAAGATAGGACCAAGGGTGCACTGTTCTCTAGTCTCCAGC  750

seq1  CTCATTTGGCATGGTCTAGTGTTTTAATACTCGCCGATTCACCAGGTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTGGCATGGTCTAGTGTTTTAATACTCGCCGATTCACCAGGTCTT  800

seq1  CTTTGCTCTGAGTCAAGTTGAATTGTACTAAGTGGCCTTGGTGTTTGTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTCTGAGTCAAGTTGAATTGTACTAAGTGGCCTTGGTGTTTGTCT  850

seq1  CAATTTTGCACCAATTGTAAGTCACATGATCATTTAAAGTCAATAGAGAT  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CAATTTTGCACCAATTGTAAGTCACATGATCATTTAAAGTC-ATAGAGAT  899

seq1  GAGGCAGCACAGCAGTAAAGTTTTAATGGAATAGCTTTGGCGCAGGCAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGCACAGCAGTAAAGTTTTAATGGAATAGCTTTGGCGCAGGCAAA  949

seq1  GGCAGTTCCTAGATCTCAGGACATGTGGAGCCCCAAGAAGTGGGGACGCT  1000
      |||||||||||||||||| ||||||||||| |||||||||||||||||||
seq2  GGCAGTTCCTAGATCTCA-GACATGTGGAG-CCCAAGAAGTGGGGACGCT  997

seq1  TGCTAGGTTTCTGGGTTTTATTTCCTGGAACACGAATGACTGGTTGGTCC  1050
      ||||||||||||||||||||||| |||  ||||| |||||||| ||||||
seq2  TGCTAGGTTTCTGGGTTTTATTT-CTG--ACACG-ATGACTGG-TGGTCC  1042

seq1  CTGGCTCCAGGCCTTGCACAGCTGTTCAGCCTTCAGTAGCAAAGCCTTGA  1100
      |||||| |||| ||||||||||||||||| ||||||||||||   |||||
seq2  CTGGCT-CAGG-CTTGCACAGCTGTTCAG-CTTCAGTAGCAA--GCTTGA  1087

seq1  TCTGTGCATTAGGGATCAGAGCTGCTGCTTATGCAGAGGCC  1141
      |||||||||   ||||||| |||||||||||||  ||||||
seq2  TCTGTGCAT--AGGATCAG-GCTGCTGCTTATG--GAGGCC  1123

seq1: chr15_76652248_76653158
seq2: B6Ng01-154M04.g_68_979 (reverse)

seq1  GCTACAGTGTACTTATGTATAACAATAAATAAATCTTTGGGCTGGAGCGA  50
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GCTACAGTGTACTTATGTATAACAATAAATAAATC-TTGGGCTGGAGCGA  49

seq1  GCTGGGTTGATCTGAGCAAGCAGAGGTGCTAAAAATTCAATTCCT-AACA  99
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCTGGGTTGATCTGAGCAAGCAGAGGTGCTAAAAATTCAATTCCTAAACA  99

seq1  A-CCACATGAAGGCTCACAACCAATTGTTCAGCTACAGTGTACCCATATA  148
      | |||||||||||||||||||| | |||||||||||||||||||||||||
seq2  ACCCACATGAAGGCTCACAACCCAATGTTCAGCTACAGTGTACCCATATA  149

seq1  CATTAAATAAATAAATAAATAAACCTTTAAAAAAGTAAATAAATACATAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAATAAATAAATAAATAAACCTTTAAAAAAGTAAATAAATACATAA  199

seq1  GATAAAGCCTGAGTACCCTCTCACATTATTCTTTGTAAAAACAAAATCCC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAGCCTGAGTACCCTCTCACATTATTCTTTGTAAAAACAAAATCCC  249

seq1  TCCATTACTTCCTATCCTATGCACCCTACCATACTCTTATTTCTTTGGTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTACTTCCTATCCTATGCACCCTACCATACTCTTATTTCTTTGGTG  299

seq1  ACTGTGTCCTGGAAAAACAAGCCTAGCACCTCAGTATCACCGTGTTTTGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGTCCTGGAAAAACAAGCCTAGCACCTCAGTATCACCGTGTTTTGG  349

seq1  TCTTCCCTTGTTCACAATTATGCACAGACACATTCCTGTTTAGGTTACTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCTTGTTCACAATTATGCACAGACACATTCCTGTTTAGGTTACTT  399

seq1  GTTGAATACAGTGCCTTCGTCCATTATCACCTTTGTCTTTACCTCTGGGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAATACAGTGCCTTCGTCCATTATCACCTTTGTCTTTACCTCTGGGG  449

seq1  AACATTCAACACCTTACCTTATGGTCGAATGGCCTTTGTTGAGAGGAGTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCAACACCTTACCTTATGGTCGAATGGCCTTTGTTGAGAGGAGTT  499

seq1  CTGATGCTTAAATTGTCAAGTGGGGAGGATTAAGAAATGTCCCAATTCTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGCTTAAATTGTCAAGTGGGGAGGATTAAGAAATGTCCCAATTCTG  549

seq1  GGCATGGTGGCACCTCCCTTTGATCCCAGCACTTGGGAGGCAGAGGCAGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGTGGCACCTCCCTTTGATCCCAGCACTTGGGAGGCAGAGGCAGG  599

seq1  TGGATCTCAATGAGGTCAGCCTTATCTACGTAGTATATTCTAGGCTAGCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCTCAATGAGGTCAGCCTTATCTACGTAGTATATTCTAGGCTAGCC  649

seq1  AGGACTGCCTAACATAATCCTGGCTTAAAGAAAAGAAGAGGAAGAGGAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGCCTAACATAATCCTGGCTTAAAGAAAAGAAGAGGAAGAGGAAA  699

seq1  AGGAAGAAGGGGTGGAGGTGGAAGGGGGGAGGAAGAGGAGGAGGAAGATG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAAGGGGTGGAGGTGGAAGGGGGGAGGAAGAGGAGGAGGAAGATG  749

seq1  TGCCCCACCCCCCACCTCGTGACATTAGTGATACATACCTCTGGGCACTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCACCCCCCACCTCGTGACATTAGTGATACATACCTCTGGGCACTT  799

seq1  CTGTGAGGGTGTTTCCTAAGAAGATTAAGGAAGGAAACCTGGGCCTGAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGGGTGTTTCCTAAGAAGATTAAGGAAGGAAACCTGGGCCTGAAA  849

seq1  ATGGATGGTATCATGACATGAGCTAGGATCCCTGGCTGAATGAAAAGAGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATGGTATCATGACATGAGCTAGGATCCCTGGCTGAATGAAAAGAGA  899

seq1  AAAAGGAGAATTC  911
      |||||||||||||
seq2  AAAAGGAGAATTC  912