BAC Information

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BAC

Clone NameB6Ng01-154O07
Chromosome15 (Build37)
Map Location 99,671,070 - 99,828,621
singlet/doubletdoublet
Overlap geneLOC100042918, 1700030F18Rik, Gm920, D330037H05Rik
Upstream geneMll2, Rhebl1, Dhh, Lmbr1l, Tuba1b, Tuba1a, EG668092, Tuba1c, Prph1, Troap, C1ql4, 2810451A06Rik, Spats2, Kcnh3, Mcrs1, EG545136, Prpf40b, Fmnl3, Tegt, C230021P08Rik, 4930556P03Rik, Faim2, LOC545137, Aqp2, Aqp5, Aqp6, Racgap1, LOC100043473, Accn2, Smarcd1, Gpd1, 2310016M24Rik, Lass5, Lima1, LOC100043481
Downstream gene4930478M13Rik, Dip2b, Atf1, 4930478A21Rik, EG432981, Mettl7a, ENSMUSG00000058057, LOC554292, Ubie, Yghl1-4, Slc11a2, EG432982, Letmd1, BC035295, Tcfcp2, Pou6f1, Dazap2, BC004728, Bin2, Ela1, Galnt6, Slc4a8, Scn8a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154O07.bB6Ng01-154O07.g
ACCDH949816DH949817
length8101,143
definitionDH949816|Mus musculus domesticus DNA, BAC clone: B6Ng01-154O07, 5' end.DH949817|Mus musculus domesticus DNA, BAC clone: B6Ng01-154O07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,671,070 - 99,671,815)(99,827,461 - 99,828,621)
sequence
gaattcttcatgtaaaccagactggccttggccttgcagtgatcctcctg
tcctagcctcccaggtgctgggattgtaggtgtgtaccattatactctct
ataagctgttcagattggccttaaacacactttgtgccttggcagaccat
gaagttggaattctcctgcctcagactcccaaatacttggaactatacat
ctctgacactaggccatgaattttgggttttgtgatgggtcttgctatat
tgtagctggtctttgctactttgtgagttcttcttcttccagccctttat
cccctactccttatcactaaataggagagaaaggatagaggagaaagaga
gagacagagagagagagagagagagagagagagagagagagagatccctg
aatctatctttctttttgtttcttctttgagcagggctactaacaaactg
taacaaccccccctccccccaacatacaactcagcctgcctttctttttt
tctttctttctttttttctttctttctttctttctttctttctttctttc
tttctttctttttttgtttttttttttttgtttttttttgtttttcgaga
cagggtttctctgtgtagccctggctgtcctggaactcactctgtaaaac
tcagaaatccgcctgactctgcctcccgagtgctgggattaaagacgtgc
gccaccaggcccagcttcggcctgccttttctagaccctgacatttatat
actctctgaatttcaaattgtcacacaatcgcagaaagtatcatctacag
ctggtaaaac
gaattcatattaaaaataaactggggggtagagagatggctcagtagtta
agagtactgattgtgttttcagaggaccccgatgcaattctcagaataca
cagtggttcacaatcctctgaaactccagttctggggacacaggccttct
ggactactcaggcagcaaaagtgaaagtggcatgcacgcgcacgcgcacg
cacacgcacacacacacacacacacacacacacacagagagagagagaga
gagagagagagagagagagagagagagaaggcaaaacacccatactcata
aaataataaaagagcaagcagaaaccactaaaatcctcacccctttatat
ctattattactctggccacaaagcatctttaaaattatagactgaataat
tcatgcacctttttaaaataaaaattaataaaggggctggagagtcgact
cagcagttgagagcactgactgctcttccagaggtcctaagttcaatccc
caggaaccatatggtggctcacaaccatctgtaatgggatctgatgccct
cttctggtgtgtctgaggacagcaactgtactcacataaaacaaataaat
cttaaaaaaaaaaaaaaaaaaagcaggtcgccgaaaaagaaaacagaatt
cctcattccagaattactgtgaatttttaaaaataaatttcagttattgt
ttttttgatcttaccgattttttgggaatggtcggcccatattcatagca
gcagcatttgttttgtaagatcctggtgaactaaagccattcacaaaact
accattgggaaagggagcctagaagaaaatgttaatatttaatggtaagg
gtgaaatatcgtcacaccagttttgtcaacaagtcatagagaactctcac
acacttctgcaatgctcacatcacaacacatgttattataccacacatca
cttattgtacaggacaaaacactttcatggcaaaatttgcaacttgaagt
attttaaaaaaaaatcacctgggaatcattttaagttcctagcccttcag
agcaggcgatctcttgagtcagtcagcctgctaacaggagtcaggatagc
aggctcatagtaagactcccttccatcaatcaacaatcatcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_99671070_99671815
seq2: B6Ng01-154O07.b_48_794

seq1  GAATTCTTCATGTAAACCAGACTGGCCTTGGCCTTGCAGTGATCCTCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATGTAAACCAGACTGGCCTTGGCCTTGCAGTGATCCTCCTG  50

seq1  TCCTAGCCTCCCAGGTGCTGGGATTGTAGGTGTGTACCATTATACTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGCCTCCCAGGTGCTGGGATTGTAGGTGTGTACCATTATACTCTCT  100

seq1  ATAAGCTGTTCAGATTGGCCTTAAACACACTTTGTGCCTTGGCAGACCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCTGTTCAGATTGGCCTTAAACACACTTTGTGCCTTGGCAGACCAT  150

seq1  GAAGTTGGAATTCTCCTGCCTCAGACTCCCAAATACTTGGAACTATACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTGGAATTCTCCTGCCTCAGACTCCCAAATACTTGGAACTATACAT  200

seq1  CTCTGACACTAGGCCATGAATTTTGGGTTTTGTGATGGGTCTTGCTATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACACTAGGCCATGAATTTTGGGTTTTGTGATGGGTCTTGCTATAT  250

seq1  TGTAGCTGGTCTTTGCTACTTTGTGAGTTCTTCTTCTTCCAGCCCTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTGGTCTTTGCTACTTTGTGAGTTCTTCTTCTTCCAGCCCTTTAT  300

seq1  CCCCTACTCCTTATCACTAAATAGGAGAGAAAGGATAGAGGAGAAAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTACTCCTTATCACTAAATAGGAGAGAAAGGATAGAGGAGAAAGAGA  350

seq1  GAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCCCTG  400

seq1  AATCTATCTTTCTTTTTGTTTCTTCTTTGAGCAGGGCTACTAACAAACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATCTTTCTTTTTGTTTCTTCTTTGAGCAGGGCTACTAACAAACTG  450

seq1  TAACAACCCCCCCTCCCCCCAACATACAACTCAGCCTGCCTTTCTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAACCCCCCCTCCCCCCAACATACAACTCAGCCTGCCTTTCTTTTTT  500

seq1  TCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  550

seq1  TTTCTTTCTTTTTTTGTTTTTTTTTTTTTGTTTTTTTTTGTTTTTCGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTTTTTGTTTTTTTTTTTTTGTTTTTTTTTGTTTTTCGAGA  600

seq1  CAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAAAAC  650

seq1  TCAGAAATCCGCCTGACTCTGCCTCCCGAGTGCTGGGATTAAAGACGTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATCCGCCTGACTCTGCCTCCCGAGTGCTGGGATTAAAGACGTGC  700

seq1  GCCACCAGGCCCAGCTTCGGCCTGCC-TTTCTAGACCCTGACATTTA  746
      |||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GCCACCAGGCCCAGCTTCGGCCTGCCTTTTCTAGACCCTGACATTTA  747

seq1: chr15_99827461_99828621
seq2: B6Ng01-154O07.g_67_1209 (reverse)

seq1  TTGATTGATTGATTGATTGA---AAGAGAGTCTTACTATGTAGCACTGGC  47
      |||| |||||| ||||||||   ||| ||||||||||||| ||| || ||
seq2  TTGA-TGATTG-TTGATTGATGGAAGGGAGTCTTACTATG-AGC-CT-GC  45

seq1  TATCCTGGAACTCCTGTGTAGACCAGGCTGACCTTGAACTC-AGAGATCT  96
      |||||||  |||||||| |||  |||||||||  || |||| ||||||| 
seq2  TATCCTG--ACTCCTGT-TAG--CAGGCTGAC--TG-ACTCAAGAGATC-  86

seq1  GCCTGCCTCTGGAGTGCTAGG-ACTTAAAATGATTCCCAGGTGATTTTTT  145
      ||||| ||||| || |||||| ||||||||||||||||||||||||||||
seq2  GCCTG-CTCTGAAGGGCTAGGAACTTAAAATGATTCCCAGGTGATTTTTT  135

seq1  TTTTTAAAAATAACTTCAAGTTGCAAAATTTTGCCATGAAAGTGTTTTGT  195
      |||   ||||| |||||||||||| |||||||||||||||||||||||||
seq2  TTT---AAAAT-ACTTCAAGTTGC-AAATTTTGCCATGAAAGTGTTTTGT  180

seq1  -CTGTAACAATTAGTGATGTGTTGTTATAATAACAATGTGTTGTGATGTG  244
       |||| ||||| ||||||||| || ||||||||| |||||||||||||||
seq2  CCTGT-ACAATAAGTGATGTG-TGGTATAATAAC-ATGTGTTGTGATGTG  227

seq1  AGCATTGCAGAAGTGTGTGAGAGTTCTCTATTGACTTGTTGACAAAACTG  294
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGCATTGCAGAAGTGTGTGAGAGTTCTCTA-TGACTTGTTGACAAAACTG  276

seq1  GTGTGACGATATTTCACCCTTACCATTAAATATTAACATTTTCTTCTAGG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGACGATATTTCACCCTTACCATTAAATATTAACATTTTCTTCTAGG  326

seq1  CTCCCTTTCCCAATGGTAGTTTTGTGAATGGCTTTAGTTCACCAGGATCT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTTTCCCAATGGTAGTTTTGTGAATGGCTTTAGTTCACCAGGATCT  376

seq1  TACAAAACAAATGCTGCTGCTATGAATATGGGCCGACCATTCCCAAAAAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAACAAATGCTGCTGCTATGAATATGGGCCGACCATTCCCAAAAAA  426

seq1  TCGGTAAGATCAAAAAAACAATAACTGAAATTTATTTTTAAAAATTCACA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTAAGATCAAAAAAACAATAACTGAAATTTATTTTTAAAAATTCACA  476

seq1  GTAATTCTGGAATGAGGAATTCTGTTTTCTTTTTCGGCGACCTGCTTTTT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTCTGGAATGAGGAATTCTGTTTTCTTTTTCGGCGACCTGCTTTTT  526

seq1  TTTTTTTTTTTTTTAAGATTTATTTGTTTTATGTGAGTACAGTTGCTGTC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTAAGATTTATTTGTTTTATGTGAGTACAGTTGCTGTC  576

seq1  CTCAGACACACCAGAAGAGGGCATCAGATCCCATTACAGATGGTTGTGAG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACACACCAGAAGAGGGCATCAGATCCCATTACAGATGGTTGTGAG  626

seq1  CCACCATATGGTTCCTGGGGATTGAACTTAGGACCTCTGGAAGAGCAGTC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATATGGTTCCTGGGGATTGAACTTAGGACCTCTGGAAGAGCAGTC  676

seq1  AGTGCTCTCAACTGCTGAGTCGACTCTCCAGCCCCTTTATTAATTTTTAT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTCTCAACTGCTGAGTCGACTCTCCAGCCCCTTTATTAATTTTTAT  726

seq1  TTTAAAAAGGTGCATGAATTATTCAGTCTATAATTTTAAAGATGCTTTGT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAGGTGCATGAATTATTCAGTCTATAATTTTAAAGATGCTTTGT  776

seq1  GGCCAGAGTAATAATAGATATAAAGGGGTGAGGATTTTAGTGGTTTCTGC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGAGTAATAATAGATATAAAGGGGTGAGGATTTTAGTGGTTTCTGC  826

seq1  TTGCTCTTTTATTATTTTATGAGTATGGGTGTTTTGCCTTCTCTCTCTCT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTTTTATTATTTTATGAGTATGGGTGTTTTGCCTTCTCTCTCTCT  876

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGT  926

seq1  GTGTGTGTGTGCGTGTGCGTGCGCGTGCGCGTGCATGCCACTTTCACTTT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGCGTGTGCGTGCGCGTGCGCGTGCATGCCACTTTCACTTT  976

seq1  TGCTGCCTGAGTAGTCCAGAAGGCCTGTGTCCCCAGAACTGGAGTTTCAG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCCTGAGTAGTCCAGAAGGCCTGTGTCCCCAGAACTGGAGTTTCAG  1026

seq1  AGGATTGTGAACCACTGTGTATTCTGAGAATTGCATCGGGGTCCTCTGAA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTGTGAACCACTGTGTATTCTGAGAATTGCATCGGGGTCCTCTGAA  1076

seq1  AACACAATCAGTACTCTTAACTACTGAGCCATCTCTCTACCCCCCAGTTT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAATCAGTACTCTTAACTACTGAGCCATCTCTCTACCCCCCAGTTT  1126

seq1  ATTTTTAATATGAATTC  1161
      |||||||||||||||||
seq2  ATTTTTAATATGAATTC  1143