BAC Information

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BAC

Clone NameB6Ng01-154P21
Chromosome15 (Build37)
Map Location 26,359,277 - 26,360,443
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040583, Myo10, LOC100040602, Ppia-ps15_175.1, 1810015C04Rik, Zfp622, AK162044
Downstream geneFbxl7, LOC622531, LOC625311
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154P21.bB6Ng01-154P21.g
ACCDH949890DH949891
length1,1781,198
definitionDH949890|Mus musculus domesticus DNA, BAC clone: B6Ng01-154P21, 5' end.DH949891|Mus musculus domesticus DNA, BAC clone: B6Ng01-154P21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctaagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctcttctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacatccacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagttacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatta
aagggtggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacacagatagagctctctcttgtgagactatgccggggcctagcaaac
acagaagtggatgcccacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaagagctaaagggatctgcaccctat
aggtggatcacattatgactaaccagtaccccgagctctgactctagctg
catatgtatcaaagatgctagtcggcatcactgcaagaaaggcccattgg
accacaacttatatggcctcagaacagggttacgccagggccaaaaaggg
ggagtgggcagggtaagtggaaagtggg
gaattcccagaggaggcctaagaggcaagacttgtcaagaccgattattt
tggcatagtatgcccaaattttatactcctggaccaggaacattccccag
gtgccagcattttatgtgtttagagagtgttatagtttggatctggaatg
catctcaaagatcatgtgttgaaggcttggtctttgctatagcacgttcc
agagttggagattgtttttcggtggttaacaactttatggatggtttaat
caaagggtagttttatattaacagacaatttagagatggcagaaaaatag
agatgagtaagtaagcaaggaggaaggaagaaggaagaagggaaaaggaa
gaaggaaggaagtatatcaatgaggtcatatcttgaagaaaatattttgt
tctttggcactgaccaccctagtggtaattcattttctgtctccctgtct
ccctgtctccctgtctccctgtctccctgtctccctgtctctctgtctct
atctctgtctctgttcctttctctgactttgtctccttctgcctctatgt
ctctgtctgcctctgtctgtctctttctctgtctctctgtatctatctgt
ctgtctgtctgtctgtctgtctgtctgtctgtctctctctctctctctct
ctctctctctctctgtatgcatgtctgtctcccatcatcccactctccct
ccctcccactgctaccctttctcctacacatccagcctgagatgagaggc
ttaactctaccattcactctccattgccacaggctgaagaatggtagaaa
caagtgcctggactcatggaccagatctgctgaagctgggaaagctaatg
ttctcatatgtactttgtaatttaattttatttgtagttctttttttaca
ctccatattccattccccgcctctcactatctaccctccgactgcttcca
catcacacaccttcttcccaactccaccccatcttccacgtgggatgccc
ttcaccccctattccacctgaacctctaacaacttcccttggggcctcca
agtcctcttggggggtaaggggcctttcattcttctgaattgaaccacag
acccaggccaggccctctactgtgggttgtcttaagggcctctaatacca
gctggtggtatatgcctcctcgcacgttgggttcagatatctgagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_26359277_26360443
seq2: B6Ng01-154P21.g_68_1265 (reverse)

seq1  TCTCTCAGATA-CTGGACC--ACCAGCCAGGCAGCATA---CACCAGCTG  44
      ||||||||||| ||| |||  ||  || |||  |||||   |||||||||
seq2  TCTCTCAGATATCTGAACCCAACGTGCGAGGAGGCATATACCACCAGCTG  50

seq1  ATAT--GAGGCCCCTAAGAC-ACACACAGTAGAGGAC--TGCCT-GGTCT  88
       |||  ||||||| |||||| || ||||||||||| |   |||| |||||
seq2  GTATTAGAGGCCCTTAAGACAACCCACAGTAGAGGGCCTGGCCTGGGTCT  100

seq1  GTG--TCCATTCAGA--GATGAA--GCACC-TAACCCCCAAGA-GAC-TG  129
      |||  || |||||||   |||||  || || || ||||||||| ||| ||
seq2  GTGGTTCAATTCAGAAGAATGAAAGGCCCCTTACCCCCCAAGAGGACTTG  150

seq1  GAGGCCCCA--GGGAGTTG-TAGAGG-TCAGGTGGAAT-GGGGGTG-AGG  173
      |||||||||  || ||||| |||||| ||||||||||| ||||||| |||
seq2  GAGGCCCCAAGGGAAGTTGTTAGAGGTTCAGGTGGAATAGGGGGTGAAGG  200

seq1  GCAT-CCACGTGG-AGATGGGGTGGAGTTGGG-AGGAGGTGTGTGATGTG  220
      |||| |||||||| |||||||||||||||||| || ||||||||||||||
seq2  GCATCCCACGTGGAAGATGGGGTGGAGTTGGGAAGAAGGTGTGTGATGTG  250

seq1  G-AGCAGTCGGAGGGTAGATAGTGAGAGGCGGGGAATGGAATATGGAGTG  269
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGTCGGAGGGTAGATAGTGAGAGGCGGGGAATGGAATATGGAGTG  300

seq1  TAAAAAAAGAACTACAAATAAAATTAAATTACAAAGTACATATGAGAACA  319
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAGAACTACAAATAAAATTAAATTACAAAGTACATATGAGAACA  350

seq1  TTAGCTTTCCCAGCTTCAGCAGATCTGGTCCATGAGTCCAGGCACTTGTT  369
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTTTCCCAGCTTCAGCAGATCTGGTCCATGAGTCCAGGCACTTGTT  400

seq1  TCTACCATTCTTCAGCCTGTGGCAATGGAGAGTGAATGGTAGAGTTAAGC  419
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCATTCTTCAGCCTGTGGCAATGGAGAGTGAATGGTAGAGTTAAGC  450

seq1  CTCTCATCTCAGGCTGGATGTGTAGGAGAAAGGGTAGCAGTGGGAGGGAG  469
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATCTCAGGCTGGATGTGTAGGAGAAAGGGTAGCAGTGGGAGGGAG  500

seq1  GGAGAGTGGGATGATGGGAGACAGACATGCATACAGAGAGAGAGAGAGAG  519
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGTGGGATGATGGGAGACAGACATGCATACAGAGAGAGAGAGAGAG  550

seq1  AGAGAGAGAGAGAGAGACAGACAGACAGACAGACAGACAGACAGACAGAC  569
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGACAGACAGACAGACAGACAGACAGACAGACAGAC  600

seq1  AGATAGATACAGAGAGACAGAGAAAGAGACAGACAGAGGCAGACAGAGAC  619
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATACAGAGAGACAGAGAAAGAGACAGACAGAGGCAGACAGAGAC  650

seq1  ATAGAGGCAGAAGGAGACAAAGTCAGAGAAAGGAACAGAGACAGAGATAG  669
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGGCAGAAGGAGACAAAGTCAGAGAAAGGAACAGAGACAGAGATAG  700

seq1  AGACAGAGAGACAGGGAGACAGGGAGACAGGGAGACAGGGAGACAGGGAG  719
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGAGACAGGGAGACAGGGAGACAGGGAGACAGGGAGACAGGGAG  750

seq1  ACAGGGAGACAGAAAATGAATTACCACTAGGGTGGTCAGTGCCAAAGAAC  769
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGAGACAGAAAATGAATTACCACTAGGGTGGTCAGTGCCAAAGAAC  800

seq1  AAAATATTTTCTTCAAGATATGACCTCATTGATATACTTCCTTCCTTCTT  819
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTTTCTTCAAGATATGACCTCATTGATATACTTCCTTCCTTCTT  850

seq1  CCTTTTCCCTTCTTCCTTCTTCCTTCCTCCTTGCTTACTTACTCATCTCT  869
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCCCTTCTTCCTTCTTCCTTCCTCCTTGCTTACTTACTCATCTCT  900

seq1  ATTTTTCTGCCATCTCTAAATTGTCTGTTAATATAAAACTACCCTTTGAT  919
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTGCCATCTCTAAATTGTCTGTTAATATAAAACTACCCTTTGAT  950

seq1  TAAACCATCCATAAAGTTGTTAACCACCGAAAAACAATCTCCAACTCTGG  969
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCATCCATAAAGTTGTTAACCACCGAAAAACAATCTCCAACTCTGG  1000

seq1  AACGTGCTATAGCAAAGACCAAGCCTTCAACACATGATCTTTGAGATGCA  1019
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTGCTATAGCAAAGACCAAGCCTTCAACACATGATCTTTGAGATGCA  1050

seq1  TTCCAGATCCAAACTATAACACTCTCTAAACACATAAAATGCTGGCACCT  1069
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGATCCAAACTATAACACTCTCTAAACACATAAAATGCTGGCACCT  1100

seq1  GGGGAATGTTCCTGGTCCAGGAGTATAAAATTTGGGCATACTATGCCAAA  1119
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAATGTTCCTGGTCCAGGAGTATAAAATTTGGGCATACTATGCCAAA  1150

seq1  ATAATCGGTCTTGACAAGTCTTGCCTCTTAGGCCTCCTCTGGGAATTC  1167
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCGGTCTTGACAAGTCTTGCCTCTTAGGCCTCCTCTGGGAATTC  1198