BAC Information

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BAC

Clone NameB6Ng01-155I11
Chromosome15 (Build37)
Map Location 79,226,175 - 79,372,235
singlet/doubletdoublet
Overlap gene4732495E13Rik, Csnk1e, LOC675798, LOC100041676, Kcnj4, Kdelr3, Ddx17
Upstream gene1700061J05Rik, Tst, Mpst, Kctd17, Tmprss6, Il2rb, C1qtnf6, Sstr3, EG626952, Rac2, Pscd4, Lrrc62, Mfng, Card10, LOC641104, LOC100041601, Cdc42ep1, Lgals2, Gga1, Sh3bp1, Pdxp, Lgals1, Nol12, Triobp, H1f0, Gcat, Galr3, LOC100042603, Ankrd54, Eif3s6ip, 1700088E04Rik, Polr2f, Sox10, LOC100041655, Pick1, Slc16a8, Baiap2l2, Pla2g6, Maff
Downstream geneDmc1, 4933432B09Rik, Pgea1, Tomm22, Josd1, Gtpbp1, Unc84b, Dnalc4, Npcd, Nptxr, Cbx6, LOC100042748, Apobec3, Cbx7, Pdgfb, Rpl3, Syngr1, Map3k7ip1, Mgat3, EG666948, Smcr7l, Atf4, Rps19bp1, Cacna1i, Enthd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155I11.bB6Ng01-155I11.g
ACCDH950285DH950286
length1,137482
definitionDH950285|Mus musculus domesticus DNA, BAC clone: B6Ng01-155I11, 5' end.DH950286|Mus musculus domesticus DNA, BAC clone: B6Ng01-155I11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,226,175 - 79,227,327)(79,371,748 - 79,372,235)
sequence
gaattctcagggccaaggccactgggaagtgtagtctgcaaagccctaca
cagatcatattgaggacagaatgagagtaattacatggcaatattaatac
tataaaaacgaccacgcatttttgccaacactcgtcactgcgcagtgtag
acgtccacactgagcgctgctgagcccctcgctgctcacaggatgaacag
agatggagaccagaggctacagcacctatggcagcgccttcagagctttt
ctaaaaatgaccacggaccctggagaacagctgtgctctgtagagtggag
gtcctctgccatgtgccacaggacagagcctctcctgatgtagcttgtcc
ataagaagaaaaatagaggtgtatgtccctcagggtggagaggctgtgtg
atctgaaaatcccttttggggtgacaaatgcaattacttcaggagggatg
ggaagagagaggaacagcctctcttgaagctgttagaggtgtcaacatct
tgggatgggctgtggacacccaggtcaaggacccgatagtcttagcaaga
gaaacagtcttcacaagatctctgcccagacttcaggctgtaaaagaaac
aggggtgtgtgtacgctcttcttcacaaccttgagacctgccaacctggc
tctcaccctggtgaccagcctttctgacctaggaacccacccagcacagg
aagatgagcagatgcccaccgtgagcttagacacagcaagcggcctgctc
aaggccatcgctccccccccccttttttttttgccatcccaggatagagg
caggggacctcatttctcctactgaacttcaaacaaagcgccaggacctt
cactcttctcgacctgtggccagcctaggcaaatacttgtgacccacgtt
cagtgaactgtgaaaccctgtaactcctacctagaacgaacatcaactca
acagcgacgtcttcttctatgggaagcatggagaagctgaaatggagtcc
gcccgcgtagcccaggtgctttgatcagcagggctcttcactagcacggc
caccagcttatctttatgcggagcttctcaagtcagtgctcagcctcttg
agactccaccactgaagagccgatgaactcgggtcag
caggcagttggtagatcttgggttctctgcaggagcagcaagcactctat
ctcctcagcctctgctttgtttttaatgccaaaacttttactagtatttt
gccctagcattttaaactacagcagaacattgcttctaggatatagtagg
aactttgggaacagtaaatgagccatgacctgttgtgttaggatagtgtt
gggtagtgtcaggctggccagagattgggtttacagttctctgagaataa
taaagcaaattaagtcttaccatcagtaactgctactttttaagacttca
tatagcgggacgtggtggtgcacacctttaatcccatcacttgggagtca
gaggcaggtggatctctgagttcgaggccagcctggtctacagagtaagt
tccaggacagccagggttacacagagaaaacctgtctcgggggggaaaag
agagagagagagagagagagagagagagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_79226175_79227327
seq2: B6Ng01-155I11.b_47_1183

seq1  GAATTCTCAGGGCCAAGGCCACTGGGAAGTGTAGTCTGCAAAGCCCTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGGGCCAAGGCCACTGGGAAGTGTAGTCTGCAAAGCCCTACA  50

seq1  CAGATCATATTGAGGACAGAATGAGAGTAATTACATGGCAATATTAATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCATATTGAGGACAGAATGAGAGTAATTACATGGCAATATTAATAC  100

seq1  TATAAAAACGACCACGCATTTTTGCCAACACTCGTCACTGCGCAGTGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAACGACCACGCATTTTTGCCAACACTCGTCACTGCGCAGTGTAG  150

seq1  ACGTCCACACTGAGCGCTGCTGAGCCCCTCGCTGCTCACAGGATGAACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCCACACTGAGCGCTGCTGAGCCCCTCGCTGCTCACAGGATGAACAG  200

seq1  AGATGGAGACCAGAGGCTACAGCACCTATGGCAGCGCCTTCAGAGCTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGAGACCAGAGGCTACAGCACCTATGGCAGCGCCTTCAGAGCTTTT  250

seq1  CTAAAAATGACCACGGACCCTGGAGAACAGCTGTGCTCTGTAGAGTGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAATGACCACGGACCCTGGAGAACAGCTGTGCTCTGTAGAGTGGAG  300

seq1  GTCCTCTGCCATGTGCCACAGGACAGAGCCTCTCCTGATGTAGCTTGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCTGCCATGTGCCACAGGACAGAGCCTCTCCTGATGTAGCTTGTCC  350

seq1  ATAAGAAGAAAAATAGAGGTGTATGTCCCTCAGGGTGGAGAGGCTGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAGAAAAATAGAGGTGTATGTCCCTCAGGGTGGAGAGGCTGTGTG  400

seq1  ATCTGAAAATCCCTTTTGGGGTGACAAATGCAATTACTTCAGGAGGGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAAATCCCTTTTGGGGTGACAAATGCAATTACTTCAGGAGGGATG  450

seq1  GGAAGAGAGAGGAACAGCCTCTCTTGAAGCTGTTAGAGGTGTCAACATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGAGAGGAACAGCCTCTCTTGAAGCTGTTAGAGGTGTCAACATCT  500

seq1  TGGGATGGGCTGTGGACACCCAGGTCAAGGACCCGATAGTCTTAGCAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATGGGCTGTGGACACCCAGGTCAAGGACCCGATAGTCTTAGCAAGA  550

seq1  GAAACAGTCTTCACAAGATCTCTGCCCAGACTTCAGGCTGTAAAAGAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGTCTTCACAAGATCTCTGCCCAGACTTCAGGCTGTAAAAGAAAC  600

seq1  AGGGGTGTGTGTACGCTCTTCTTCACAACCTTGAGACCTGCCAACCTGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTGTGTGTACGCTCTTCTTCACAACCTTGAGACCTGCCAACCTGGC  650

seq1  TCTCACCCTGGTGACCAGCCTTTCTGACCTAGGAACCCACCCAGCACAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCCTGGTGACCAGCCTTTCTGACCTAGGAACCCACCCAGCACAGG  700

seq1  AAGATGAGCAGATGCCCACCGTGAGCTTAGACACAGCAAGCGGCCTGCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGAGCAGATGCCCACCGTGAGCTTAGACACAGCAAGCGGCCTGCTC  750

seq1  AAGGCCATCGCTCCCCCCCCCCTTTTTTTTTTGCCATCCCAGGATAGAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCATCGCTCCCCCCCCCCTTTTTTTTTTGCCATCCCAGGATAGAGG  800

seq1  CAGGGGACCTCATTTCTCCTACTGAACTTCAAACAAAGCGCCAGGACCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGACCTCATTTCTCCTACTGAACTTCAAACAAAGCGCCAGGACCTT  850

seq1  CACTCTTCTCGACCTGTGGCCAGCCTAGGCAAATACTTGTGACCCACGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTTCTCGACCTGTGGCCAGCCTAGGCAAATACTTGTGACCCACGTT  900

seq1  CAGTGAACTGTGAAACCCTGTAAACTCCTACCTAGAACGAACATCAACTC  950
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CAGTGAACTGTGAAACCCTGT-AACTCCTACCTAGAACGAACATCAACTC  949

seq1  AACAGCGACGTCTTCTTCTATGGGGAAGCATGGAGAAGCTGAAATGGAGT  1000
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AACAGCGACGTCTTCTTCTAT-GGGAAGCATGGAGAAGCTGAAATGGAGT  998

seq1  CCGCCCGCGTAGCCCAGGGTGGCTTTGATCAGCAGGGGCTCTCCACTAGC  1050
      ||||||||||||||||||   ||||||||||||| ||||||| |||||||
seq2  CCGCCCGCGTAGCCCAGG--TGCTTTGATCAGCA-GGGCTCTTCACTAGC  1045

seq1  ACCGGCCACACAGCTTATCTTTATGCGGAGCTTCTCCAAGTCAGTGCTCA  1100
      | ||||||| ||||||||||||||||||||||||| ||||||||||||||
seq2  A-CGGCCAC-CAGCTTATCTTTATGCGGAGCTTCT-CAAGTCAGTGCTCA  1092

seq1  GCCCTTCTTGAGGGACTCCAACACACTGAAGAGCCGGAAGTGACTCGGGT  1150
      |||  ||||||  |||||||   |||||||||||||  |   ||||||||
seq2  GCC--TCTTGA--GACTCCA--CCACTGAAGAGCCG--ATGAACTCGGGT  1134

seq1  CAG  1153
      |||
seq2  CAG  1137

seq1: chr15_79371748_79372235
seq2: B6Ng01-155I11.g_66_553 (reverse)

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTCCCCCCCGAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTCCCCCCCGAGACA  50

seq1  GGTTTTCTCTGTGTAACCCTGGCTGTCCTGGAACTTACTCTGTAGACCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTCTCTGTGTAACCCTGGCTGTCCTGGAACTTACTCTGTAGACCAG  100

seq1  GCTGGCCTCGAACTCAGAGATCCACCTGCCTCTGACTCCCAAGTGATGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCCTCGAACTCAGAGATCCACCTGCCTCTGACTCCCAAGTGATGGG  150

seq1  ATTAAAGGTGTGCACCACCACGTCCCGCTATATGAAGTCTTAAAAAGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGGTGTGCACCACCACGTCCCGCTATATGAAGTCTTAAAAAGTAG  200

seq1  CAGTTACTGATGGTAAGACTTAATTTGCTTTATTATTCTCAGAGAACTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTACTGATGGTAAGACTTAATTTGCTTTATTATTCTCAGAGAACTGT  250

seq1  AAACCCAATCTCTGGCCAGCCTGACACTACCCAACACTATCCTAACACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCAATCTCTGGCCAGCCTGACACTACCCAACACTATCCTAACACAA  300

seq1  CAGGTCATGGCTCATTTACTGTTCCCAAAGTTCCTACTATATCCTAGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCATGGCTCATTTACTGTTCCCAAAGTTCCTACTATATCCTAGAAG  350

seq1  CAATGTTCTGCTGTAGTTTAAAATGCTAGGGCAAAATACTAGTAAAAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTTCTGCTGTAGTTTAAAATGCTAGGGCAAAATACTAGTAAAAGTT  400

seq1  TTGGCATTAAAAACAAAGCAGAGGCTGAGGAGATAGAGTGCTTGCTGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATTAAAAACAAAGCAGAGGCTGAGGAGATAGAGTGCTTGCTGCTC  450

seq1  CTGCAGAGAACCCAAGATCTACCAACTGCCTGGAATTC  488
      ||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGAGAACCCAAGATCTACCAACTGCCTGGAATTC  488