BAC Information

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BAC

Clone NameB6Ng01-155M09
Chromosome15 (Build37)
Map Location 30,747,718 - 30,748,683
singlet/doubletsinglet
Overlap geneCtnnd2
Upstream geneLOC382975
Downstream gene9630009A06Rik, Dap, EG625796, 5730557B15Rik, Ropn1l, LOC622810, March6, Cmbl, Cct5, A930016P21Rik, LOC667231
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155M09.bB6Ng01-155M09.g
ACCDH950464DH950465
length9541,180
definitionDH950464|Mus musculus domesticus DNA, BAC clone: B6Ng01-155M09, 5' end.DH950465|Mus musculus domesticus DNA, BAC clone: B6Ng01-155M09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcactaactgatcatttaatgtattttaattttaatagatctt
agcaatattttaacagtgcttatacctcaaggtagtcatagtagaaaacg
acactcagagtcaggaagatcacagctaccaacccccatgagctactttg
gcaagaatgtttggttgtcttggtaaatatgtgcaaacttgcacacactg
acagttgtaccctcattccaactgaataggaaccttcttcatgcctgaca
ctatcagttcctttgatcaagtcctaatgcttcatatttcagcctggtct
tctcgcctcttcaatatgtgcccactaccagtctcatctctgtacttctc
cctagaaggcgagacaagaagacagtgtgcatcctgacctacttcacaca
aataaacacttggcctacatgttgcttggctttagtctatgatctttttt
ttttatttcagcaaaatggattttaattgaagagttcagttctattttca
agtggcgtgcctgctctgttcacacccacacgatgccctaggattaactg
ttgctcaaatgaaagcagagatgagcctgtactccagtcaggcatccagt
attgaacagtctcacgggtgcactgacaaggctccctccctgttcctgta
tatagccacatgcatgatgttttcagatggtaaagaactaccctctatcc
ttttcttgcgatttagaaacttctttttgtggttaatgagacacagtaag
aactctgacgtataaggctaagaaatacgaatcaccacacatagagacat
gaataaacaaggatcctggacatgacaagtagcagtttgctggtgttgat
gatgggttcttttgttgttgttattgtttttgtgttgtgtttagtttgtt
gtttagagtttttactcttcgatcatcatagttatgcagagatgcttcgt
gcta
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggagatccgtctggcggttcctca
gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctcctttagaagtggga
acaaaacacccttggaaggagttacagagacaaagtttagagctgagatg
aaaggatggaccatgtagagactgccttatccagggatccaccccataat
cagcatccaaacgcttacaccattgcatacactagcaagattttatcgaa
aggacccagatgtagctgtctcttttgagactatgccggggtctagcaaa
cacagaagtggatgcccacagtcagctaatggatggatcacagggctccc
aatggaggagctagagaagtacccaaggagctaaagggatctgcaaccta
tagtgatcacattatgactaccagtacccggagctctgatctagctgcta
tgtatcaaagatgcctagtcgcatcacttggaaaaaagaggcccattgaa
caccaacctttattctcaagaaacacatatggtgaaatacgtcgccagta
gtccataaaaatgtggagagtggtgtgcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_30747718_30748683
seq2: B6Ng01-155M09.b_45_998

seq1  GAATTCATCACTAACTGATCATTTAATGTATTTTAATTTTAATAGATCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCACTAACTGATCATTTAATGTATTTTAATTTTAATAGATCTT  50

seq1  AGCAATATTTTAACAGTGCTTATACCTCAAGGTAGTCATAGTAGAAAACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATATTTTAACAGTGCTTATACCTCAAGGTAGTCATAGTAGAAAACG  100

seq1  ACACTCAGAGTCAGGAAGATCACAGCTACCAACCCCCATGAGCTACTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCAGAGTCAGGAAGATCACAGCTACCAACCCCCATGAGCTACTTTG  150

seq1  GCAAGAATGTTTGGTTGTCTTGGTAAATATGTGCAAACTTGCACACACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAATGTTTGGTTGTCTTGGTAAATATGTGCAAACTTGCACACACTG  200

seq1  ACAGTTGTACCCTCATTCCAACTGAATAGGAACCTTCTTCATGCCTGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTGTACCCTCATTCCAACTGAATAGGAACCTTCTTCATGCCTGACA  250

seq1  CTATCAGTTCCTTTGATCAAGTCCTAATGCTTCATATTTCAGCCTGGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAGTTCCTTTGATCAAGTCCTAATGCTTCATATTTCAGCCTGGTCT  300

seq1  TCTCGCCTCTTCAATATGTGCCCACTACCAGTCTCATCTCTGTACTTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGCCTCTTCAATATGTGCCCACTACCAGTCTCATCTCTGTACTTCTC  350

seq1  CCTAGAAGGCGAGACAAGAAGACAGTGTGCATCCTGACCTACTTCACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAAGGCGAGACAAGAAGACAGTGTGCATCCTGACCTACTTCACACA  400

seq1  AATAAACACTTGGCCTACATGTTGCTTGGCTTTAGTCTATGATCTTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACACTTGGCCTACATGTTGCTTGGCTTTAGTCTATGATCTTTTTT  450

seq1  TTTTATTTCAGCAAAATGGATTTTAATTGAAGAGTTCAGTTCTATTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTCAGCAAAATGGATTTTAATTGAAGAGTTCAGTTCTATTTTCA  500

seq1  AGTGGCGTGCCTGCTCTGTTCACACCCACACGATGCCCTAGGATTAACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCGTGCCTGCTCTGTTCACACCCACACGATGCCCTAGGATTAACTG  550

seq1  TTGCTCAAATGAAAGCAGAGATGAGCCTGTACTCCAGTCAGGCATCCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCAAATGAAAGCAGAGATGAGCCTGTACTCCAGTCAGGCATCCAGT  600

seq1  ATTGAACAGTCTCACGGGTGCACTGACAAGGCTCCCTCCCTGTTCCTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAACAGTCTCACGGGTGCACTGACAAGGCTCCCTCCCTGTTCCTGTA  650

seq1  TATAGCCACATGCATGATGTTTTCAGATGGTAAAGAACTACCCTCTATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCCACATGCATGATGTTTTCAGATGGTAAAGAACTACCCTCTATCC  700

seq1  TTTTCTTGCGATTTAGAAACTTCTTTTTGTGGTTAATGAGACACAGTAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTGCGATTTAGAAACTTCTTTTTGTGGTTAATGAGACACAGTAAG  750

seq1  AACTCTGACGTATAAGGCTAAGAAATACGAATCACCACACATAGAGACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGACGTATAAGGCTAAGAAATACGAATCACCACACATAGAGACAT  800

seq1  GAATAAACAAGGATCCTGGACATGACAAGTAGCAGTTTGCTGGTGTTGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAACAAGGATCCTGGACATGACAAGTAGCAGTTTGCTGGTGTTGAT  850

seq1  GATGGGTTCTTTTGTTGTTGTTATTGTTTTTTGTTGTTGTTGTTTTAGTT  900
      |||||||||||||||||||||||||||||||   ||||||   |||||||
seq2  GATGGGTTCTTTTGTTGTTGTTATTGTTTTT--GTGTTGT--GTTTAGTT  896

seq1  TGTTGTTTTAGGTTTTTTACTCTTTCGATCATTCTATAGTTTTAATGCAG  950
      ||||| |||||  ||||||||| |||||||||   ||||||   ||||||
seq2  TGTTG-TTTAGAGTTTTTACTC-TTCGATCAT--CATAGTT---ATGCAG  939

seq1  CAGATGCTTCGTGCTA  966
       |||||||||||||||
seq2  -AGATGCTTCGTGCTA  954