BAC Information

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BAC

Clone NameB6Ng01-155M15
Chromosome15 (Build37)
Map Location 68,843,398 - 68,844,516
singlet/doubletsinglet
Overlap geneKhdrbs3
Upstream geneZfat1, LOC100041000, EG665945, EG633752
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155M15.b
ACCDH950476
length1,103
definitionDH950476|Mus musculus domesticus DNA, BAC clone: B6Ng01-155M15, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacttgggtcagaattcacatcagtccattcattgggtcagtaac
taaatctgaatgctgacaaagcaggagaatccatgtgtcccgttccagga
tccctgtatcattttcctcacctgtatgctaatcttagtcttgcttagcc
attataggaaattcgtaattactgaaatggctagtaaaaaaaaaaaagat
acctttttaaattttacatttttggcaccactttatgtggtctggaaaat
atcaccctgtgatttatgtagcaggaacctaaatacttgttatccatgag
tggtattgggcagtgtttccccatattcaaggctggtaaactactgttaa
gatttgaatgttacaaatatggccggtttgtttttcctagttcaactttg
tggggaagcttttgggtccgcgtggcaattccctgaagcgcttacaagaa
gaaacgttgacaaaaatgtccatccttggcaaaggttccatgagagacaa
ggcaaaggtaatatggccatggacagcggtgaccttgtcggccatgcgct
gctgtgtctgtctgttattgtctgtttgttgtctgctgtgctaatgcctg
ggatctcagagctgagtagaagctcaaacggaattagagggaattggcac
gtgaggtgtaaatacactttgatgctctatagaagactgaatttctctgg
ccagttccaaaacagatactatcttagctatttaagattcatgtagcaaa
tcaaacagtagtgcttacattgtttattctgaatgaagcccgttcgttac
cttttgtagtgaacagaaagaaaagttacctagagttccccactttaata
taataatttaaattagttcctttggggcgtttttcctgtatagatctttt
acctacctccaaatgctatgaggacctatggtcacagcagaccacatatg
gctgtggtctacgatttcagcccatgctatggctgtgtttgtgaaaacac
ttcacagtactcagagaatgtggctccaatatgcatttctcccaactcct
tcgcatcgtgtcgtgcttggcttggcatacaagtgggtaatgacctcttt
ttt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_68843398_68844516
seq2: B6Ng01-155M15.b_45_1147

seq1  GAATTCACTTGGGTCAGAATTCACATCAGTCCATTCATTGGGTCAGTAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGGGTCAGAATTCACATCAGTCCATTCATTGGGTCAGTAAC  50

seq1  TAAATCTGAATGCTGACAAAGCAGGAGAATCCATGTGTCCCGTTCCAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCTGAATGCTGACAAAGCAGGAGAATCCATGTGTCCCGTTCCAGGA  100

seq1  TCCCTGTATCATTTTCCTCACCTGTATGCTAATCTTAGTCTTGCTTAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTATCATTTTCCTCACCTGTATGCTAATCTTAGTCTTGCTTAGCC  150

seq1  ATTATAGGAAATTCGTAATTACTGAAATGGCTAGTAAAAAAAAAAAAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGGAAATTCGTAATTACTGAAATGGCTAGTAAAAAAAAAAAAGAT  200

seq1  ACCTTTTTAAATTTTACATTTTTGGCACCACTTTATGTGGTCTGGAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTTAAATTTTACATTTTTGGCACCACTTTATGTGGTCTGGAAAAT  250

seq1  ATCACCCTGTGATTTATGTAGCAGGAACCTAAATACTTGTTATCCATGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCCTGTGATTTATGTAGCAGGAACCTAAATACTTGTTATCCATGAG  300

seq1  TGGTATTGGGCAGTGTTTCCCCATATTCAAGGCTGGTAAACTACTGTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTGGGCAGTGTTTCCCCATATTCAAGGCTGGTAAACTACTGTTAA  350

seq1  GATTTGAATGTTACAAATATGGCCGGTTTGTTTTTCCTAGTTCAACTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGAATGTTACAAATATGGCCGGTTTGTTTTTCCTAGTTCAACTTTG  400

seq1  TGGGGAAGCTTTTGGGTCCGCGTGGCAATTCCCTGAAGCGCTTACAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAAGCTTTTGGGTCCGCGTGGCAATTCCCTGAAGCGCTTACAAGAA  450

seq1  GAAACGTTGACAAAAATGTCCATCCTTGGCAAAGGTTCCATGAGAGACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACGTTGACAAAAATGTCCATCCTTGGCAAAGGTTCCATGAGAGACAA  500

seq1  GGCAAAGGTAATATGGCCATGGACAGCGGTGACCTTGTCGGCCATGCGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGGTAATATGGCCATGGACAGCGGTGACCTTGTCGGCCATGCGCT  550

seq1  GCTGTGTCTGTCTGTTATTGTCTGTTTGTTGTCTGCTGTGCTAATGCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTCTGTCTGTTATTGTCTGTTTGTTGTCTGCTGTGCTAATGCCTG  600

seq1  GGATCTCAGAGCTGAGTAGAAGCTCAAACGGAATTAGAGGGAATTGGCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTCAGAGCTGAGTAGAAGCTCAAACGGAATTAGAGGGAATTGGCAC  650

seq1  GTGAGGTGTAAATACACTTTGATGCTCTATAGAAGACTGAATTTCTCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGTGTAAATACACTTTGATGCTCTATAGAAGACTGAATTTCTCTGG  700

seq1  CCAGTTCCAAAACAGATACTATCTTAGCTATTTAAGATTCATGTAGCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCCAAAACAGATACTATCTTAGCTATTTAAGATTCATGTAGCAAA  750

seq1  TCAAACAGTAGTGCTTACATTGTTTATTCTGAATGAAGCCCGTTCGTTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACAGTAGTGCTTACATTGTTTATTCTGAATGAAGCCCGTTCGTTAC  800

seq1  CTTTTGTAGTGAACAGAAAGAAAAGTTACCTAGAGTTCCCCACTTTAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTAGTGAACAGAAAGAAAAGTTACCTAGAGTTCCCCACTTTAATA  850

seq1  TAATAATTTAAATTAGTTCCTTTGGGGCGTTTTTCCTGTATAGATCTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATTTAAATTAGTTCCTTTGGGGCGTTTTTCCTGTATAGATCTTTT  900

seq1  ACCTACCTCCAAATGCTATGAGGACCTATGGTCCACAGCAGACCACATAT  950
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACCTACCTCCAAATGCTATGAGGACCTATGGT-CACAGCAGACCACATAT  949

seq1  GGCTGTGGTCTACGATTTCAAGGCCCATTGCTATGGCTGTGTTTGTG-AG  999
      ||||||||||||||||||||  ||||| ||||||||||||||||||| | 
seq2  GGCTGTGGTCTACGATTTCA--GCCCA-TGCTATGGCTGTGTTTGTGAAA  996

seq1  ACACTTCACAGTACTCAAGGAGAATGTGGCTCAATAATGCATTTCTCACA  1049
      |||||||||||||||||  ||||||||||||| |  ||||||||||| ||
seq2  ACACTTCACAGTACTCA--GAGAATGTGGCTCCAATATGCATTTCTCCCA  1044

seq1  ACTCCTTCCGGCCATCCGGTGGTCCGTGCTTGGTCTTGGCATACAGTGTG  1099
      ||||||||    ||||  ||    ||||||||| |||||||||||  |||
seq2  ACTCCTTC---GCATCGTGT----CGTGCTTGG-CTTGGCATACA-AGTG  1085

seq1  GGTACATTGACCTCTTTTTT  1119
      |||  | |||||||||||||
seq2  GGT--AATGACCTCTTTTTT  1103