BAC Information

Click to search

BAC

Clone NameB6Ng01-155N20
Chromosome15 (Build37)
Map Location 13,531,149 - 13,532,035
singlet/doubletsinglet
Overlap genenone
Upstream gene6030458C11Rik, Rnasen, Cdh6, LOC100039907, LOC666686, LOC239338
Downstream geneLOC666708, LOC674819
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155N20.bB6Ng01-155N20.g
ACCDH950524DH950525
length1,164886
definitionDH950524|Mus musculus domesticus DNA, BAC clone: B6Ng01-155N20, 5' end.DH950525|Mus musculus domesticus DNA, BAC clone: B6Ng01-155N20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatacctaatgatagagaagtacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttctacctcacaccagtcagaatggctaagataaaaaattcaggtgacag
cagatgctggtgaggatgtggagaaagaggagcactcctccattgatggt
gggattgcaagctcgtacaaccactctggaaatcagtctggcagttcctc
agaaaattagacatagtactactggaggattccgcaatacctctcctggg
catatatccagaagatatcccaaccggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatttacacaat
ggagtactactcagctattaaaaaaatgaatttatgaaattcctaggcaa
atggatggacctggtgggcatcatcctgaatgaggtaatccaatcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccagaaac
ttaggataaccaagacataagatacaatttgttaaatggatgaaactcaa
aaagaatgaagaccaaagtgtggacactttgccccttcttagaattggga
acaaaacacccatggaaagagttacagagacaaagtttggagctgtgacg
aaaggatggaccgtctagagactgtcatatccgtgtatccatcccataat
cagcttcccaacaatgacaccattgcacacactagcaagattttcctgaa
aggacccagatctctctcttgggcgcatatgccgggccctagcaaacaca
gaagtggatcctcacaatcagctattgcatggatcacaggccccaatgag
gagctaggaaagtacccatgagctaaagggatctgcaacctataggtaga
caacaatatgactacagtatcccccagaactcggtctctagctgcaatgt
atcaaaggatggcctagcggcatcactgggaaggaggtcatgactttgca
cctttatgtcccagatacagggaatgcatggccaaaagtggaagcgcgta
cggcatcgcgcctc
gaattcatccccagtgtacaaagagctaaggcacagctccctattccaac
atgactcaaggctctgccttaaaaaaaaaaaaaagaaaagaaaagaggag
aaaagaatggagggaaagatggcagtagggagaagacagatagcattttt
ttaaaaatagcaagcaaatacataggctatgccagaatcattattcatta
aagaaatagtgagtggggttttactatgtcccgagcatggcataggctaa
agagatagcagtgggggaagggccaaaacatcaggcctgtcctcaagggg
gtaccatcaatgacagtacattttctgttaggaaatgtgcctttaaggag
ctagaaagccatctggggatgatattaaagcaaattccagagtttggatg
aattggactatgaagtgttggattttgattgcagccttacaactttatgc
ttttcctttgcaaggggctcacatccacttttggactgatgatctaggtc
agatagataggggcctgggtagcaggaaggggtggtggtggcgatggctt
tcattccaggacgttttccgtgagttaaatcagatatgctattttgtagg
gtgttcaccattggattgttctttcccctctagactaggctgacctcaaa
ggcaaatgacatatttcttctctgtgtctgcagtgccgcttagtccctaa
tgacaccacagcaatagaacaaaggagactcaaataatgtctatttttgg
agaaaactcaggctttatcactttttttttgaaggtgacataggaaagta
gggcaagactaatcacaggtaagattagatttaaaagagagggggggaac
cttttcttaaaacagaaaatgttttacagaaatgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_13531149_13532035
seq2: B6Ng01-155N20.g_70_955 (reverse)

seq1  TTCATTTCTGTTATAACATTCTCTGTTTTATGAAAAGGTTCCCCCCCCTC  50
      |||||||||| || |||||| ||||||||| ||||||||| |||||||||
seq2  TTCATTTCTG-TAAAACATTTTCTGTTTTAAGAAAAGGTT-CCCCCCCTC  48

seq1  TCTTTTAAATCTAATCTTACCTGTGATTAGTCTTGCCCTACTTTCCTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTAAATCTAATCTTACCTGTGATTAGTCTTGCCCTACTTTCCTATG  98

seq1  TCACCTTCAAAAAAAAAGTGATAAAGCCTGAGTTTTCTCCAAAAATAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTTCAAAAAAAAAGTGATAAAGCCTGAGTTTTCTCCAAAAATAGAC  148

seq1  ATTATTTGAGTCTCC-TTGTTCTATTGCTGTGGTGTCATTAGGGACTAAG  199
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATTATTTGAGTCTCCTTTGTTCTATTGCTGTGGTGTCATTAGGGACTAAG  198

seq1  CGGCACTGCAGACACAGAGAAGAAATATGTCATTTGCCTTTGAGGTCAGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCACTGCAGACACAGAGAAGAAATATGTCATTTGCCTTTGAGGTCAGC  248

seq1  CTAGTCTAGAGGGGAAAGAACAATCCAATGGTGAACACCCTACAAAATAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCTAGAGGGGAAAGAACAATCCAATGGTGAACACCCTACAAAATAG  298

seq1  CATATCTGATTTAACTCACGGAAAACGTCCTGGAATGAAAGCCATCGCCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTGATTTAACTCACGGAAAACGTCCTGGAATGAAAGCCATCGCCA  348

seq1  CCACCACCCCTTCCTGCTACCCAGGCCCCTATCTATCTGACCTAGATCAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACCCCTTCCTGCTACCCAGGCCCCTATCTATCTGACCTAGATCAT  398

seq1  CAGTCCAAAAGTGGATGTGAGCCCCTTGCAAAGGAAAAGCATAAAGTTGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCAAAAGTGGATGTGAGCCCCTTGCAAAGGAAAAGCATAAAGTTGT  448

seq1  AAGGCTGCAATCAAAATCCAACACTTCATAGTCCAATTCATCCAAACTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGCAATCAAAATCCAACACTTCATAGTCCAATTCATCCAAACTCT  498

seq1  GGAATTTGCTTTAATATCATCCCCAGATGGCTTTCTAGCTCCTTAAAGGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTGCTTTAATATCATCCCCAGATGGCTTTCTAGCTCCTTAAAGGC  548

seq1  ACATTTCCTAACAGAAAATGTACTGTCATTGATGGTACCCCCTTGAGGAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCCTAACAGAAAATGTACTGTCATTGATGGTACCCCCTTGAGGAC  598

seq1  AGGCCTGATGTTTTGGCCCTTCCCCCACTGCTATCTCTTTAGCCTATGCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGATGTTTTGGCCCTTCCCCCACTGCTATCTCTTTAGCCTATGCC  648

seq1  ATGCTCGGGACATAGTAAAACCCCACTCACTATTTCTTTAATGAATAATG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCGGGACATAGTAAAACCCCACTCACTATTTCTTTAATGAATAATG  698

seq1  ATTCTGGCATAGCCTATGTATTTGCTTGCTATTTTTAAAAAAATGCTATC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGCATAGCCTATGTATTTGCTTGCTATTTTTAAAAAAATGCTATC  748

seq1  TGTCTTCTCCCTACTGCCATCTTTCCCTCCATTCTTTTCTCCTCTTTTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCTCCCTACTGCCATCTTTCCCTCCATTCTTTTCTCCTCTTTTCT  798

seq1  TTTCTTTTTTTTTTTTTTAAGGCAGAGCCTTGAGTCATGTTGGAATAGGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTTTTTTTTTTAAGGCAGAGCCTTGAGTCATGTTGGAATAGGG  848

seq1  AGCTGTGCCTTAGCTCTTTGTACACTGGGGATGAATTC  887
      ||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGCCTTAGCTCTTTGTACACTGGGGATGAATTC  886