BAC Information

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BAC

Clone NameB6Ng01-156P04
Chromosome15 (Build37)
Map Location 27,307,551 - 27,433,298
singlet/doubletdoublet
Overlap geneAnk
Upstream geneFbxl7, LOC622531, LOC625311
Downstream geneBC087945, LOC100040622, BC052328, Trio, LOC667126, Dnahc5, EG382974
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156P04.bB6Ng01-156P04.g
ACCDH951312DH951313
length8971,089
definitionDH951312|Mus musculus domesticus DNA, BAC clone: B6Ng01-156P04, 5' end.DH951313|Mus musculus domesticus DNA, BAC clone: B6Ng01-156P04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,432,399 - 27,433,298)(27,307,551 - 27,308,646)
sequence
gaattccacagagatgttcctcttcaaaggctggtccttgagacatgtgt
gacgtggcacgtgaaggctgtgcggtaccagcctagcagaagtggtttta
ggaacgcactcttgctcacacgctaccggagagcaggcaagctgcccaaa
cgccacttcccaagcatttgctagtttatttataaagtagggctttgaca
ccctttcccgtcctatctcagagcctgtagtgtatttgtaggactttgac
atttttcggtagaagctgagttctaactgcataacacactcagtttttga
taagttgatggagttatttctagaaatcagggctctgagaagaacaaagt
atactccttgtgaaggtatttctggctattacagtgtagtacagggtaag
agtgaattgagaatgactcgaccttggatgggtcactttacctctaccac
ccacccaccccccactcccccatgccctccccacccccaccaccccttcc
agagaacggccaagagaagacaccaaaacacttttcctagagctattgtg
agggctggcgacgctcaccttctgtgcttagttaggatccctcaagagtc
ccctgccctcctcattaacactgccagcgtgaatctggcgagacagctcc
gtggagaaaaacactcgctcctgagcttgaacacctgaattttggccctg
gtacattcatgaatggaggaacagagactgcaaactgacctctgacttca
acattcacgttgtggagtgctccgtccctccctccccttgccaaaatcgg
ccatgagcgcagttacaactaatttagagaatcatatgttgagtgaaatg
gctctactgttcttgcttgggaaggcaccttctgtgctgcgaccaat
gaattcttccatctgtttcctgacacagatgctaatttgatgcgttgcta
caggcagagaccgggcaggaataagaattttgagcaacacttgactctgt
aactgtaatcacagctttataattggccatagatctataggatttaatca
atgaatatgtttaatgtggtaatgcttctgttggggtatgccattcacag
ttgattaaagaagctggttgagaaaatatgagcatccatagagttctctg
gcacaccaacatctctgtttatttatttatttataaattgttttatttat
ttacattccaaatgttacaccccttcccagttccccttccaagagttctt
caccccatccccactcccctttgcctctgagagggtgctcccccccccca
cctacccatccctctcactcacccactcacccctacttcctgtctggaag
cacaacatggcatcagtaaagggtttggtgccgtccaatgggatggattc
caagttgggcgggtcaatggatatcctttccttcaatctctgcctttcct
tcaatctctgctccattttcatccttttctttcttttagacaggaacaat
tctaggtttaaaaaaaaatgaaggtaggttagttgatgggatcgcaccat
ttcaaagcacaagtcatttaaggcaaagccattttttttctctgtgtagc
tctggctgtcctggaactcactttgtagaccaggctggcctcaaactcag
taatctgcctgcctctgcctcccgagtactgggataaaggcgtgcgccac
cacgcccggcaaaaccttctttctttaagtatacatttcccagatagtgt
gggtgtgtgttggtgaccacaggcccaagtgataaacaacaacaagcctc
caggtagatttcatcattcttagtcaactctgggacatgttaactaaagg
gatcttgtcatctctcagctacacttctatgaagctgataatgtcatgtg
gtggagcaagggaagcacccaccctatatttactcttgacgaatgtagga
gcttgtcaggctggggatctaagagacggcaatctatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_27432399_27433298
seq2: B6Ng01-156P04.b_46_942 (reverse)

seq1  ATTGGTCACAGCACAGAAGGTGCCTTTCCCAAGCATGAACCGTGAGGGCC  50
      ||||||| |||||||||||||||| |||||||||| |||| || || |||
seq2  ATTGGTCGCAGCACAGAAGGTGCC-TTCCCAAGCAAGAACAGT-AGAGCC  48

seq1  ATTTTAACTC-ACCGATGATTCTCTAAATTCGTTTTTAATTGCGCTCATT  99
      | ||| |||| ||  ||||||||||||||| | || ||| ||||||||| 
seq2  A-TTTCACTCAACATATGATTCTCTAAATTAG-TTGTAACTGCGCTCATG  96

seq1  TACTATTTTGGCAAGGGGAGGGAGGGACAGAGCATGCCACAACGTGAATG  149
        | |||||||||||||||||||||||| |||||  ||||||||||||||
seq2  GCCGATTTTGGCAAGGGGAGGGAGGGACGGAGCACTCCACAACGTGAATG  146

seq1  TTGAAGTCAGAGGTCAGTTTGCAGGCTCTCTTCTTGCATTTGTGAATGTA  199
      |||||||||||||||||||||||| |||| ||| | ||||  ||||||||
seq2  TTGAAGTCAGAGGTCAGTTTGCAGTCTCTGTTCCTCCATTCATGAATGTA  196

seq1  CCAGGGACTAAATTCAGGTTTTCAAGCTCAGGAGCGAGTGTTTTTCTCCA  249
      |||||| | |||||||||| ||||||||||||||||||||||||||||||
seq2  CCAGGGCCAAAATTCAGGTGTTCAAGCTCAGGAGCGAGTGTTTTTCTCCA  246

seq1  CGGAGCTGTCTCGCCAGATTCACGCTGGCAGTGATAATGAGGAGGGCAGG  299
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CGGAGCTGTCTCGCCAGATTCACGCTGGCAGTGTTAATGAGGAGGGCAGG  296

seq1  GGACTCCTGAAGGATCCTAACTAAGCACAGAAGCTGAACGCTGCCAGCCC  349
      |||||| ||| |||||||||||||||||||||| ||| ||  ||||||||
seq2  GGACTCTTGAGGGATCCTAACTAAGCACAGAAGGTGAGCGTCGCCAGCCC  346

seq1  TCACAATAGCTCTAGGAAAAGTGTTTTCGTGTCTTCTCTTGGCCGTTCTC  399
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCACAATAGCTCTAGGAAAAGTGTTTTGGTGTCTTCTCTTGGCCGTTCTC  396

seq1  TGGAAGGGGTGGTGGGGGTGGGGAGGGCATGGGGGAGTGGGGGGTGGGTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGGGTGGTGGGGGTGGGGAGGGCATGGGGGAGTGGGGGGTGGGTG  446

seq1  GGTGGTAGAGGTAAAGTGACCCATCCAAGGTCGAGTCATTCTCAATTCAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTAGAGGTAAAGTGACCCATCCAAGGTCGAGTCATTCTCAATTCAC  496

seq1  TCTTACCCTGTACTACACTGTAATAGCCAGAAATACCTTCACAAGGAGTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACCCTGTACTACACTGTAATAGCCAGAAATACCTTCACAAGGAGTA  546

seq1  TACTTTGTTCTTCTCAGAGCCCTGATTTCTAGAAATAACTCCATCAACTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGTTCTTCTCAGAGCCCTGATTTCTAGAAATAACTCCATCAACTT  596

seq1  ATCAAAAACTGAGTGTGTTATGCAGTTAGAACTCAGCTTCTACCGAAAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAAACTGAGTGTGTTATGCAGTTAGAACTCAGCTTCTACCGAAAAA  646

seq1  TGTCAAAGTCCTACAAATACACTACAGGCTCTGAGATAGGACGGGAAAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAAGTCCTACAAATACACTACAGGCTCTGAGATAGGACGGGAAAGG  696

seq1  GTGTCAAAGCCCTACTTTATAAATAAACTAGCAAATGCTTGGGAAGTGGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAAAGCCCTACTTTATAAATAAACTAGCAAATGCTTGGGAAGTGGC  746

seq1  GTTTGGGCAGCTTGCCTGCTCTCCGGTAGCGTGTGAGCAAGAGTGCGTTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGGCAGCTTGCCTGCTCTCCGGTAGCGTGTGAGCAAGAGTGCGTTC  796

seq1  CTAAAACCACTTCTGCTAGGCTGGTACCGCACAGCCTTCACGTGCCACGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACCACTTCTGCTAGGCTGGTACCGCACAGCCTTCACGTGCCACGT  846

seq1  CACACATGTCTCAAGGACCAGCCTTTGAAGAGGAACATCTCTGTGGAATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATGTCTCAAGGACCAGCCTTTGAAGAGGAACATCTCTGTGGAATT  896

seq1  C  900
      |
seq2  C  897

seq1: chr15_27307551_27308646
seq2: B6Ng01-156P04.g_68_1156

seq1  GAATTCTTCCTTCTGTTTCCTGACACAGATGCTAATTTGATGCGTTGCTA  50
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCATCTGTTTCCTGACACAGATGCTAATTTGATGCGTTGCTA  50

seq1  CAGGCAGAGACCGGGCAGGAATAAGAATTTTGAGCAACACTTGACTCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGAGACCGGGCAGGAATAAGAATTTTGAGCAACACTTGACTCTGT  100

seq1  AACTGTAATCACAGCTTTATAATTGGCCATAGATCTATAGGATTTAATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTAATCACAGCTTTATAATTGGCCATAGATCTATAGGATTTAATCA  150

seq1  ATGAATATGTTTAATGTGGTAATGCTTCTGTTGGGGTATGCCATTCACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATATGTTTAATGTGGTAATGCTTCTGTTGGGGTATGCCATTCACAG  200

seq1  TTGATTAAAGAAGCTGGTTGAGAAAATATGAGCATCCATAGAGTTCTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTAAAGAAGCTGGTTGAGAAAATATGAGCATCCATAGAGTTCTCTG  250

seq1  GCACACCAACATCTCTGTTTATTTATTTATTTATAAATTGTTTTATTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACCAACATCTCTGTTTATTTATTTATTTATAAATTGTTTTATTTAT  300

seq1  TTACATTCCAAATGTTACACCCCTTCCCAGTTCCCCTTCCAAGAGTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTCCAAATGTTACACCCCTTCCCAGTTCCCCTTCCAAGAGTTCTT  350

seq1  CACCCCATCCCCACTCCCCTTTGCCTCTGAGAGGGTGCTCCCCCCCCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCATCCCCACTCCCCTTTGCCTCTGAGAGGGTGCTCCCCCCCCCCA  400

seq1  CCTACCCATCCCTCTCACTCACCCACTCACCCCTACTTCCTGTCTGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCCATCCCTCTCACTCACCCACTCACCCCTACTTCCTGTCTGGAAG  450

seq1  CACAACATGGCATCAGTAAAGGGTTTGGTGCCGTCCAATGGGATGGATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACATGGCATCAGTAAAGGGTTTGGTGCCGTCCAATGGGATGGATTC  500

seq1  CAAGTTGGGCGGGTCAATGGATATCCTTTCCTTCAATCTCTGCCTTTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTGGGCGGGTCAATGGATATCCTTTCCTTCAATCTCTGCCTTTCCT  550

seq1  TCAATCTCTGCTCCATTTTCATCCTTTTCTTTCTTTTAGACAGGAACAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCTCTGCTCCATTTTCATCCTTTTCTTTCTTTTAGACAGGAACAAT  600

seq1  TCTAGGTTTAAAAAAAAATGAAGGTAGGTTAGTTGATGGGATCGCACCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGTTTAAAAAAAAATGAAGGTAGGTTAGTTGATGGGATCGCACCAT  650

seq1  TTCAAAGCACAAGTCATTTAAGGCAAAGCCATTTTTTTTCTCTGTGTAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGCACAAGTCATTTAAGGCAAAGCCATTTTTTTTCTCTGTGTAGC  700

seq1  TCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCAAACTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCAAACTCAG  750

seq1  TAATCTGCCTGCCTCTGCCTCCCGAGTACTGGGATTAAAGGCGTGCGCCA  800
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TAATCTGCCTGCCTCTGCCTCCCGAGTACTGGGA-TAAAGGCGTGCGCCA  799

seq1  CCACGCCCGGCAAAACCTTCTTTCTTTAAGTATACATTTCCCAGATAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGCCCGGCAAAACCTTCTTTCTTTAAGTATACATTTCCCAGATAGTG  849

seq1  TGGGTGTGTGTTGGTGACCACAGGCCCAAGTGATAAACAACAACAAGCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTGTGTTGGTGACCACAGGCCCAAGTGATAAACAACAACAAGCCT  899

seq1  CCAGTTAGATTTCATCATTCTTAGTCAACTCTGGGACAGTGTTAACTAAA  950
      |||| ||||||||||||||||||||||||||||||||| |||||||| ||
seq2  CCAGGTAGATTTCATCATTCTTAGTCAACTCTGGGACA-TGTTAACT-AA  947

seq1  AGGGATCTTGTCATCTCTCCAAGCTACACCTCTATGAGACTTGATAAATG  1000
      |||||||||||||||||||  |||||||| ||||||| |  |||| ||||
seq2  AGGGATCTTGTCATCTCTC--AGCTACACTTCTATGA-AGCTGAT-AATG  993

seq1  TCATGTTGGTGAGCAAGGTGAAGCAACCACACTATATTTA-ACTTGACAG  1049
      |||||| |  |||||||| |||||| |||| |||||||||  ||||||  
seq2  TCATGTGGTGGAGCAAGG-GAAGCACCCACCCTATATTTACTCTTGACGA  1042

seq1  ATGTAAGGAGC-TGTCAGGCTGGGGA-CTTAAAGACAGGCAATCTATTA  1096
      |||| |||||| |||||||||||||| || | |||| ||||||||||||
seq2  ATGT-AGGAGCTTGTCAGGCTGGGGATCTAAGAGAC-GGCAATCTATTA  1089