BAC Information

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BAC

Clone NameB6Ng01-157G13
Chromosome6 (Build37)15 (Build37)
Map Location 102,442,042 - 102,442,4815,768,384 - 5,769,455
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG666084, Cntn3, EG666123
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157G13.bB6Ng01-157G13.g
ACCDH951649DH951650
length9331,058
definitionDH951649|Mus musculus domesticus DNA, BAC clone: B6Ng01-157G13, 5' end.DH951650|Mus musculus domesticus DNA, BAC clone: B6Ng01-157G13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(102,442,042 - 102,442,481)(5,768,384 - 5,769,455)
sequence
gaattctttatttttatttttattaggtatttatttcatttacatttcca
atgctatcccaaaagtcccccacccactcccccatccattcccctaccca
cccattcctacttcttgtccctggtgttcccctgtactgaggcagataaa
gtttgcacgaccaatgggcctctctttccactgatggccaactaggccat
cttctgctacatatgcagctggagacacgagctctgggggatactgggta
gttcatattgttgttccacctatagggttgcagatccctttagctccttg
gttactttctctagctcctccattgggggccctgtgaatcatccagtagc
tgactgtgagcatccatttctgtgttttctaggccccaacatagtctcac
aagagacagctatatctgggtcctttcagaaaaatcttgctagtgtatgt
gaaagatcctgacagaatgtaaaaggacacagaagccctgaaattggcaa
gatagatgtcagtgtgagcagaactagcttcactgatttagaaaattaga
ggtgcacaatgctctagccactccttgaacctatgtgtctaccaatgttt
tgactgtaccttgacccatgtgtgtgcgcactgatgaagcccattttgtg
tttgtgatattggttgctgagagagagttagaaaatctccccagcaaccc
cagcccggccaatcctgagttactacacctgcaccagactctttccttgt
acccctcccatacctatttcttgagaatagacattgtttagatctgaaaa
tcccctactctccctcttctcctttcccccctgagggcctataaaactgg
gacatctttccctcgaggtcgactcctctacctctgtgtgggatatgagt
tgtccccagactctggcttttcccaaataaagc
gaattcaaagtctgagtaatgtccttaatttccaccatcactcagtgccc
actgtctcagccacagaaactgccagctccattcagaatgagtaccgtgc
acaagcctactgtcttacccctacagcagacttctactgtgcctgtcctg
tgtttaagtatccttacatctataaattccatgattatacttggtgcagt
agttaatgtagtgacaaagcgtacagagtcacagtctgcaagcaatagcc
tgtgcatacaggctggcatgggattccttggtagggcaaagtaacttgag
ttctggaagttctgtgtcttccaggaagcgagtcttgggtgctggacttc
agacccagttgcatcctgaaagtaatgagcttattgattaagactttgaa
agcaaagactttgttctaggtacccatgatggaggcttactgctgtggac
attggcaatcagtaacttggtagttgacttccagccgtgatgggtggcag
taatgggtagcactgcgtagcagcaggaagcttctactatcttaactctc
aaactgcccttagttatagaaatcctcagacaagggttacaagcaccaca
gcattcaggtgtgtggggtgagggtgcaatcttcaccctttcatggctga
gaggctttcagccctcgggcttccagggctaggagtctttgttcctgaca
gtggataggatgaataggagctctcagccttgcgatgtctggtaccattg
gtttttagggataagcagcatcctaggactcttaaaattagcagaagcca
taacttctcatcttttaatttaaattctcttgtctctccattaattctgc
ttttccattattttcagtctctctctctctctttctctctcccactatca
ctgctgtagctttactgtcattttgtcatcatttctttcttacctcctca
gccactcttccagaaaaaaaagtcaaagagagtcctaaaaatgctttcat
tgatgtatgattcataagagaagcttctttcaggtgctgacaagttagct
gttcagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_102442042_102442481
seq2: B6Ng01-157G13.b_56_494 (reverse)

seq1  CATAAACTAGCAAGATTTTGCTGAAAGGACCCTGATTTAGCTGTCTCTTG  50
      |||| |||||||||||||| |||||||||||| ||| |||||||||||||
seq2  CATACACTAGCAAGATTTTTCTGAAAGGACCCAGATATAGCTGTCTCTTG  50

seq1  TGAGACTATGCCGGGGTCTAGCAAACACAGAAGTGGATGCTCACAGTCAG  100
      ||||||||||  |||| |||| |||||||||| |||||||||||||||||
seq2  TGAGACTATGTTGGGGCCTAGAAAACACAGAAATGGATGCTCACAGTCAG  100

seq1  CTATTGGATGGATCACAGGGCCCCCAATGGAGGAGCTAGAGAAATTACCC  150
      ||| ||||||  |||||||||||||||||||||||||||||||| || ||
seq2  CTACTGGATGATTCACAGGGCCCCCAATGGAGGAGCTAGAGAAAGTAACC  150

seq1  AAGGAGCTAAAGGGATCTGCAACCCTATAAGTGGAACAACAATATGAACT  200
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACAATATGAACT  200

seq1  AACCAGTA--CCCCAGAGCTCGTGTCTCTAACTGCATATGTATCAAAAGA  248
      | ||||||  |||||||||||||||||| | ||||||||||| || ||||
seq2  ACCCAGTATCCCCCAGAGCTCGTGTCTCCAGCTGCATATGTAGCAGAAGA  250

seq1  TGGCCTAGTCAGCCATCACTGGAAAGAGAGGCCCACTGGACTTGCAAACT  298
      |||||||||  ||||||| |||||||||||||||| ||| | ||||||||
seq2  TGGCCTAGTTGGCCATCAGTGGAAAGAGAGGCCCATTGGTCGTGCAAACT  300

seq1  TTATATGCCCCAGTACAGGGGAATGCCAGGGTCAAGAAGTGGGAGTGGGT  348
      |||| |||| |||||||||||||  |||||| |||||||| ||| |||||
seq2  TTATCTGCCTCAGTACAGGGGAACACCAGGGACAAGAAGTAGGAATGGGT  350

seq1  GGGTAGGGGAGTGGGTGGGGGAGTGTGTGGGGGACTTTTGGAATAGCATT  398
      |||||||||| ||| |||||||||| ||||||||||||||| ||||||||
seq2  GGGTAGGGGAATGGATGGGGGAGTGGGTGGGGGACTTTTGGGATAGCATT  400

seq1  GGAAATGTAAATGAGGAAAATACCTAATAAAAAGTATAAAAA  440
      ||||||||||||||   |||||||||||||||   |||||||
seq2  GGAAATGTAAATGAAATAAATACCTAATAAAA---ATAAAAA  439

seq1: chr15_5768384_5769455
seq2: B6Ng01-157G13.g_67_1124 (reverse)

seq1  GGCTGAAACAGCTAACTTTGTCAGCCACCTTGAAAGAAGCATCCTCTTAT  50
      ||||| |||||||||| ||||||| |||| |||||||||| | |||||||
seq2  GGCTG-AACAGCTAAC-TTGTCAG-CACC-TGAAAGAAGC-TTCTCTTAT  45

seq1  GAATCATGACATCCAATGAAAGCATTTTCTAGAACTCTCTTTTGACTTTT  100
      ||||||| |||| ||||||||||||||| ||| |||||| ||||||  ||
seq2  GAATCAT-ACAT-CAATGAAAGCATTTT-TAGGACTCTC-TTTGAC--TT  89

seq1  TTTTTTCTGGAAGAGTGGGCTGAGAAGGTAAGAAAAGGAAATGATGACAA  150
      |||||||||||||||| ||||||| ||||||||||  |||||||||||||
seq2  TTTTTTCTGGAAGAGT-GGCTGAGGAGGTAAGAAA--GAAATGATGACAA  136

seq1  AATGACAGTAAAGCTACAGCAGTGATAGTGGGAGAGAGAAAGAGAGAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACAGTAAAGCTACAGCAGTGATAGTGGGAGAGAGAAAGAGAGAGAG  186

seq1  AGAGACTGAAAATAATGG-AAAGCAGAATTAATGGAGAGACAAGAGAATT  249
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGAGACTGAAAATAATGGAAAAGCAGAATTAATGGAGAGACAAGAGAATT  236

seq1  TAAAATTAAAAGATGAGAAGTTATGGCTTCTGCTAATTTTAAGAGTCCTA  299
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-AAATTAAAAGATGAGAAGTTATGGCTTCTGCTAATTTTAAGAGTCCTA  285

seq1  GGATGCTGCTTATCCCTAAAAACCAATGGTACCAGACATCGCAAGGCTGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCTGCTTATCCCTAAAAACCAATGGTACCAGACATCGCAAGGCTGA  335

seq1  GAGCTCCTATTCATCCTATCCACTGTCAGGAACAAAGACTCCTAGCCCTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCTATTCATCCTATCCACTGTCAGGAACAAAGACTCCTAGCCCTG  385

seq1  GAAGCCCGAGGGCTGAAAGCCTCTCAGCCATGAAAGGGTGAAGATTGCAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCCGAGGGCTGAAAGCCTCTCAGCCATGAAAGGGTGAAGATTGCAC  435

seq1  CCTCACCCCACACACCTGAATGCTGTGGTGCTTGTAACCCTTGTCTGAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACCCCACACACCTGAATGCTGTGGTGCTTGTAACCCTTGTCTGAGG  485

seq1  ATTTCTATAACTAAGGGCAGTTTGAGAGTTAAGATAGTAGAAGCTTCCTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTATAACTAAGGGCAGTTTGAGAGTTAAGATAGTAGAAGCTTCCTG  535

seq1  CTGCTACGCAGTGCTACCCATTACTGCCACCCATCACGGCTGGAAGTCAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTACGCAGTGCTACCCATTACTGCCACCCATCACGGCTGGAAGTCAA  585

seq1  CTACCAAGTTACTGATTGCCAATGTCCACAGCAGTAAGCCTCCATCATGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAAGTTACTGATTGCCAATGTCCACAGCAGTAAGCCTCCATCATGG  635

seq1  GTACCTAGAACAAAGTCTTTGCTTTCAAAGTCTTAATCAATAAGCTCATT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTAGAACAAAGTCTTTGCTTTCAAAGTCTTAATCAATAAGCTCATT  685

seq1  ACTTTCAGGATGCAACTGGGTCTGAAGTCCAGCACCCAAGACTCGCTTCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCAGGATGCAACTGGGTCTGAAGTCCAGCACCCAAGACTCGCTTCC  735

seq1  TGGAAGACACAGAACTTCCAGAACTCAAGTTACTTTGCCCTACCAAGGAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGACACAGAACTTCCAGAACTCAAGTTACTTTGCCCTACCAAGGAA  785

seq1  TCCCATGCCAGCCTGTATGCACAGGCTATTGCTTGCAGACTGTGACTCTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATGCCAGCCTGTATGCACAGGCTATTGCTTGCAGACTGTGACTCTG  835

seq1  TACGCTTTGTCACTACATTAACTACTGCACCAAGTATAATCATGGAATTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGCTTTGTCACTACATTAACTACTGCACCAAGTATAATCATGGAATTT  885

seq1  ATAGATGTAAGGATACTTAAACACAGGACAGGCACAGTAGAAGTCTGCTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGTAAGGATACTTAAACACAGGACAGGCACAGTAGAAGTCTGCTG  935

seq1  TAGGGGTAAGACAGTAGGCTTGTGCACGGTACTCATTCTGAATGGAGCTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGTAAGACAGTAGGCTTGTGCACGGTACTCATTCTGAATGGAGCTG  985

seq1  GCAGTTTCTGTGGCTGAGACAGTGGGCACTGAGTGATGGTGGAAATTAAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTCTGTGGCTGAGACAGTGGGCACTGAGTGATGGTGGAAATTAAG  1035

seq1  GACATTACTCAGACTTTGAATTC  1072
      |||||||||||||||||||||||
seq2  GACATTACTCAGACTTTGAATTC  1058