BAC Information

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BAC

Clone NameB6Ng01-157G19
Chromosome15 (Build37)
Map Location 48,242,121 - 48,242,897
singlet/doubletsinglet
Overlap geneCsmd3
Upstream geneLOC665130, LOC100039485, LOC100039493
Downstream geneEG665146, LOC100039600
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157G19.bB6Ng01-157G19.g
ACCDH951661DH951662
length9651,245
definitionDH951661|Mus musculus domesticus DNA, BAC clone: B6Ng01-157G19, 5' end.DH951662|Mus musculus domesticus DNA, BAC clone: B6Ng01-157G19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaaggaaaatttaacagatcactaaaattttttatgatgtgta
gattcccttaaatagagaatgaatcataatagacataatatattaatcat
aaatacaactgaaaaattagagaaatttaaactctgaggtttctgaatgg
gtgtttatatactcattgtttaatcatcttaaattccaaaaacagaggca
ctagttacatatgaagaagtaacaataaaataattattattgaaataatt
aagtataatttgaagaaaacatgtttcctctttaaaattaatttttaaat
catttattttttcttctttcttgtattacatcttagtcaagcttcccttc
cctgcaatcctcccagtcacaccaacctacctccctgctcctcaagattc
acacttccttatttcccttcagaaaagagcgggcctcccagggatatgcc
aaatctctataccaaaatttcatagaaagttataataagactaggtaggc
acgggctggagagatggctcagtggttaggagcactgactgcttttccag
aggtcctgagttcacttcccagcaaccacatggtggctcacaaccatctg
caatgggatccgatgccctcttctggtgtgtctgaaggcagctacagtgt
actcatatacattaaataaataaatcttaaaaaggaaaaaaagactgggt
aggtgcttactcatattgaggctccattagacaacatagtaagaggaaaa
gtattccaaaagcagagccatctccatctcacactgttaggaaggtcaaa
tataaaaatatgtagaactaatccagatgtaaatcaaaacaacattgtga
tgaaggctcgatcgaaacatgaagagtgaaatctgcacatttgtctgtcc
tgtaaattccaaatggaataacctaagcacttcatagttggtccatttta
ttttcttctgtatag
gaattctcattacagacatgaatggcagtctacaatacctaatagtagaa
agtaggtgggttgtggttttaggaggaactgaagtattgtaatattcctg
aaagggttagtagaacagaatacacctggtgcatgtttctcactaggccc
agaggaataacaaaattaggtatttactaagggacgcctggtgatgggtt
taacaatagactagcattgcatcagaccattcatctgactcctatgttta
gctgatcttagatagggctgttcctgtctctgttgtaaacactgcctggc
tcctggcatatttttatgtatgtattttctttgttttgtataacgaacca
ttatgcatctagatgtaccttggttgatgtattcgcctagctttcttgtg
tttcttctatattataagtctggttcttgctttgagaaattacattctga
cacaacactcccttgtgttctcttctgtttgtcacccttttcaccgactc
tctgctcacctgttccaggactctgattctcccatggatggagggactga
ctgaggtcagttcacggcagggaggggacagaaaagaagcccagagggat
aagagaatgaatagaaataagaagcctccaggagcaggggatgctctaga
aagtactggagacctggaaggtgagaaactctcagaactcattggggaaa
gccaaaattcccaacattggggaaacgaagagttcaactccagaagatag
atagggcctaaagaaaatggataaggttactaacctacaggcaaaattcc
tgaccctgatttcttccagactaatgtacttcaggaacaaaaatggaaaa
gagactgaagaaagtggttccaaagactggcccaacttccgattcatctc
attggggcttcaaggcctgacactattactgatgctatgatgtgctacag
acaggaatcttgtatggctgtcttctgagagatcttatcagcagctgacg
agacagagcagatattatactcaacatttgactgaatttgagcccctatg
ttgattagtaaggctgagaactggaaggaagatgagccatggagaccaca
gtcactatctaactcaagttctccgaactgagactgcatcacgacgatac
ctgtcaggacctttaatatatagatacaaggcttctgctggctctaaaga
aaagtgttcttaatcctgaacgttaagtggcccacgcgctatgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_48242121_48242897
seq2: B6Ng01-157G19.b_46_822 (reverse)

seq1  ATGGAGATGGCTCTGCTTTTGGAATACTTTTCCTCTTACTATGTTGTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGATGGCTCTGCTTTTGGAATACTTTTCCTCTTACTATGTTGTCTA  50

seq1  ATGGAGCCTCAATATGAGTAAGCACCTACCCAGTCTTTTTTTCCTTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGCCTCAATATGAGTAAGCACCTACCCAGTCTTTTTTTCCTTTTTA  100

seq1  AGATTTATTTATTTAATGTATATGAGTACACTGTAGCTGCCTTCAGACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTATTTATTTAATGTATATGAGTACACTGTAGCTGCCTTCAGACAC  150

seq1  ACCAGAAGAGGGCATCGGATCCCATTGCAGATGGTTGTGAGCCACCATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAAGAGGGCATCGGATCCCATTGCAGATGGTTGTGAGCCACCATGT  200

seq1  GGTTGCTGGGAAGTGAACTCAGGACCTCTGGAAAAGCAGTCAGTGCTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCTGGGAAGTGAACTCAGGACCTCTGGAAAAGCAGTCAGTGCTCCT  250

seq1  AACCACTGAGCCATCTCTCCAGCCCGTGCCTACCTAGTCTTATTATAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACTGAGCCATCTCTCCAGCCCGTGCCTACCTAGTCTTATTATAACT  300

seq1  TTCTATGAAATTTTGGTATAGAGATTTGGCATATCCCTGGGAGGCCCGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGAAATTTTGGTATAGAGATTTGGCATATCCCTGGGAGGCCCGCT  350

seq1  CTTTTCTGAAGGGAAATAAGGAAGTGTGAATCTTGAGGAGCAGGGAGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTGAAGGGAAATAAGGAAGTGTGAATCTTGAGGAGCAGGGAGGTA  400

seq1  GGTTGGTGTGACTGGGAGGATTGCAGGGAAGGGAAGCTTGACTAAGATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGTGTGACTGGGAGGATTGCAGGGAAGGGAAGCTTGACTAAGATGT  450

seq1  AATACAAGAAAGAAGAAAAAATAAATGATTTAAAAATTAATTTTAAAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAAGAAAGAAGAAAAAATAAATGATTTAAAAATTAATTTTAAAGAG  500

seq1  GAAACATGTTTTCTTCAAATTATACTTAATTATTTCAATAATAATTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATGTTTTCTTCAAATTATACTTAATTATTTCAATAATAATTATTT  550

seq1  TATTGTTACTTCTTCATATGTAACTAGTGCCTCTGTTTTTGGAATTTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTACTTCTTCATATGTAACTAGTGCCTCTGTTTTTGGAATTTAAG  600

seq1  ATGATTAAACAATGAGTATATAAACACCCATTCAGAAACCTCAGAGTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTAAACAATGAGTATATAAACACCCATTCAGAAACCTCAGAGTTTA  650

seq1  AATTTCTCTAATTTTTCAGTTGTATTTATGATTAATATATTATGTCTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTCTAATTTTTCAGTTGTATTTATGATTAATATATTATGTCTATT  700

seq1  ATGATTCATTCTCTATTTAAGGGAATCTACACATCATAAAAAATTTTAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCATTCTCTATTTAAGGGAATCTACACATCATAAAAAATTTTAGT  750

seq1  GATCTGTTAAATTTTCCTTGAGAATTC  777
      |||||||||||||||||||||||||||
seq2  GATCTGTTAAATTTTCCTTGAGAATTC  777