BAC Information

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BAC

Clone NameB6Ng01-159N22
Chromosome15 (Build37)2 (Build37)
Map Location 68,440,873 - 68,441,12188,342,600 - 88,343,185
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneZfat1, LOC100041000
Downstream geneEG665945, EG633752, Khdrbs3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159N22.bB6Ng01-159N22.g
ACCDH953407DH953408
length914587
definitionDH953407|Mus musculus domesticus DNA, BAC clone: B6Ng01-159N22, 5' end.DH953408|Mus musculus domesticus DNA, BAC clone: B6Ng01-159N22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(68,440,873 - 68,441,121)(88,342,600 - 88,343,185)
sequence
gaattctcaactgaggaatactgaatggctgagaaggacctaaaatgttt
aacatccttaatcatcagggaaataaaaataaaaaacaaacaaacaaaca
accttgagattccaccctacacaattcagaatggctaagatcaaaaactg
agatgacagcagatgctggtgaggatgtggagaaagaggaaggcttctcc
attgctggtgggactgcacgctgttacaaccactctgaaatcagtttagt
ggttccctaaaaaattggacatagtactactggaagatctggaaatacca
ctccggggcatatacccagaagatgatccaatgtataataaggacaaatg
ttccactatgttcatagcagcctcctttataatagccagaagctggaaag
aacccaaatgtctctcaacagaggaatgaatacagaaaacatggtacatt
tacacaatggagtactactcagctgttaaaaacaatgactttatgaaatt
cttagacaaatggatggatctggaggatatcatcctaagtgaggtaaccc
aatcacaaaagaacacacatgatatgcactcactgataagtagatattag
cccagatgcaaagaattcttaactgagaaatacaaaatggctgagaagca
cctaaaaaaaaaaaaagctcaatatccttagtcatcagggaaatgcaaat
caaaacaaccctgacattctacctcacatcaatcagaatggctaagatca
aaaactgagatgacagcaggtgctggtgaggatgtggagaaagaggaaca
ctcctccattgctggtgggattgcaagctggtgcaaccactctggaaatc
agtctggcagttcttcagaaaattttacatagtactaccagaagatctgg
cataccactccggg
gaattctatgtagttttccatgaatagtgagtggcatttgtcaatttctt
tctagtcctttgaataacactttacagtaggctcatagttttcaagggga
ggttccaaggctggacaatcttactgaggctatggaggacccaccgaaag
ggatctatcatgaatgccttctgaaagacttaacaagcagctgaaagagt
aagatgcagatatttgcacccaaccaatggacaaaaactgctgtcccctg
ttgttgaattgagaaaaggcaggaggaggctgaggaagagggcaaccctg
taggaagaccagcagtctcaattaatcttgacccctgaggtctctcaaac
actggactaccaaccaggcagcatacaccagctgatatgaacccgccccc
acccacccacccacacatacagtagaggactgctgggtctgagttcagtc
agagaagatccacctaaccctcaagaaactggaggccctagggaatttag
agttctggtggggtgggggttggggccatcctcatggagtcagagggcca
gggaggagatatggggatgtggaacagttggagggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_68440873_68441121
seq2: B6Ng01-159N22.b_394_642 (reverse)

seq1  AATATCCACTTATCAGTGAGTACATATCATGTGAGTTCTTTTGTGATTGG  50
      |||||| |||||||||||||| ||||||||||| ||||||||||||||||
seq2  AATATCTACTTATCAGTGAGTGCATATCATGTGTGTTCTTTTGTGATTGG  50

seq1  GTTACCTCACTCAGGATGATGCCCTCCAGGTCCAATAATTTGCCTAGGAA  100
      ||||||||||| ||||||||  ||||||| ||||   ||||| ||| |||
seq2  GTTACCTCACTTAGGATGATATCCTCCAGATCCATCCATTTGTCTAAGAA  100

seq1  TTTCATAAATTCATTCTTTTTAATAGCTGAGTAGTACTCCATTGTGTAAA  150
      ||||||||| ||||| ||||||| ||||||||||||||||||||||||||
seq2  TTTCATAAAGTCATTGTTTTTAACAGCTGAGTAGTACTCCATTGTGTAAA  150

seq1  TGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATGTGGGTTCT  200
      |||||||  |||||||||| ||||||||||||||| ||||| ||||||||
seq2  TGTACCATGTTTTCTGTATTCATTCCTCTGTTGAGAGACATTTGGGTTCT  200

seq1  TTCCAGCTTCTGGCTATTATACATAAGGCTGCTATGAACATAGTGGAGC  249
      ||||||||||||||||||||| |  |||||||||||||||||||||| |
seq2  TTCCAGCTTCTGGCTATTATAAAGGAGGCTGCTATGAACATAGTGGAAC  249

seq1: chr2_88342600_88343185
seq2: B6Ng01-159N22.g_69_655

seq1  GAATTCTATGTAGTTTTCCATGAATAGTGAGTGGCATTTGTCAATTTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGTAGTTTTCCATGAATAGTGAGTGGCATTTGTCAATTTCTT  50

seq1  TCTAGTCCTTTGAATAACACTTTACAGTAGGCTCATAGTTTTCAAGGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTCCTTTGAATAACACTTTACAGTAGGCTCATAGTTTTCAAGGGGA  100

seq1  GGTTCCAAGGCTGGACAATCTTACTGAGGCTATGGAGGACCCACCGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCAAGGCTGGACAATCTTACTGAGGCTATGGAGGACCCACCGAAAG  150

seq1  GGATCTATCATGAATGCCTTCTGAAAGACTTAACAAGCAGCTGAAAGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTATCATGAATGCCTTCTGAAAGACTTAACAAGCAGCTGAAAGAGT  200

seq1  AAGATGCAGATATTTGCACCCAACCAATGGACAAAAACTGCTGTCCCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCAGATATTTGCACCCAACCAATGGACAAAAACTGCTGTCCCCTG  250

seq1  TTGTTGAATTGAGAAAAGGCAGGAGGAGGCTGAGGAAGAGGGCAACCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAATTGAGAAAAGGCAGGAGGAGGCTGAGGAAGAGGGCAACCCTG  300

seq1  TAGGAAGACCAGCAGTCTCAATTAATCTTGACCCCTGAGGTCTCTCAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGACCAGCAGTCTCAATTAATCTTGACCCCTGAGGTCTCTCAAAC  350

seq1  ACTGGACTACCAACCAGGCAGCATACACCAGCTGATATGAACCCGCCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGACTACCAACCAGGCAGCATACACCAGCTGATATGAACCCGCCCCC  400

seq1  ACCCACCCACCCACACATACAGTAGAGGACTGCTGGGTCTGAGTTCAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACCCACCCACACATACAGTAGAGGACTGCTGGGTCTGAGTTCAGTC  450

seq1  AGAGAAGATCCACCTAACCCTCAAGAAACTGGAGGCCCTAGGGAATTTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGATCCACCTAACCCTCAAGAAACTGGAGGCCCTAGGGAATTTAG  500

seq1  AGTTCTGGTGGGGTGGGGGTTGGGGCCATCCTCATGGAGTCAGAGGGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGGTGGGGTGGGGGTTGGGGCCATCCTCATGGAGTCAGAGGGCCA  550

seq1  GGGAGGAGATAT-GGGATGTGGAACAGTTGGAGGGTG  586
      |||||||||||| ||||||||||||||||||||||||
seq2  GGGAGGAGATATGGGGATGTGGAACAGTTGGAGGGTG  587