BAC Information

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BAC

Clone NameB6Ng01-159P10
Chromosome2 (Build37)15 (Build37)
Map Location 142,776,676 - 142,777,69821,642,925 - 21,643,959
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159P10.bB6Ng01-159P10.g
ACCDH953474DH953475
length9711,021
definitionDH953474|Mus musculus domesticus DNA, BAC clone: B6Ng01-159P10, 5' end.DH953475|Mus musculus domesticus DNA, BAC clone: B6Ng01-159P10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,676 - 142,777,698)(21,642,925 - 21,643,959)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagattctttccccatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaaacaattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactgcatggttttagcttccttgtcgaagatctagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcttgaagaattgagttggagttttg
atggcgattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccaatccatgagcatggagatctttccatcttct
gagatcttctttaatttctttcttcagagacttgaagttttatcatacat
atctttcactttctttagttagagtcatgccgagatattttatattattt
gtgactattgagaaggatgtg
gaattctgggactgtgtgtgcatatctttgtgaataaaatttaaatattt
tgatttgttgtttgtgtgtataaatttacatacacataattagttgaatt
gcttggtgtggttcttattagagagcagattgcaaaccatttcttcaaca
ttgaattatatgtaattccttcgtgatagagtctgcgctccaaaagcaga
gaaaatctgtttttcttcatgttttcctttccttgatgtcgtcaaacaca
gtcctaacattattttgaacctgctgctctttgttatctctactattaat
gttttgatatcatttttctcttcttaacattttcatcgtcagtgcatgtt
tgcgaatccaagtacatgtatatgatgtatatatgtgatgtgtatatatt
tatatatttgtaggtcagtgctgggtgttttcttcaatcatgctatcata
ttgaggcatgtcttaataaataaggtacttagacatttgctagaggaagt
ctccagtgaacccatggaatccttctgttcctgacttccaagaaaagaga
tcatggggtcataaagtcaccctgacttttatgggggttctggacaacta
gattctgattgtcataactatacagccagtaatttctgagttgaaccacc
tccccagtatccatttcacaataatttatataatcctttccatgtttttg
ctgctcatgaacttcaatagtttataatgatgcttccctttggtttagac
tgtgaagacatttatagtgaaagtagatggcaagaccctagaaaaaactc
agtggatattggtaatggagtcctgactagaattatgagggatgcattgt
atccattatatcagacttctaggcaggagattgccctggttaatattccc
aatttgtataatcacaaataattttcactgaaaaagttcttggtgatctt
aagaaatgtattggagtttaagcagcaactagacaccctacgagtcatgc
tcattgaggtcatgtgctaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776676_142777698
seq2: B6Ng01-159P10.b_48_610 (reverse)

seq1  ACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCA  50

seq1  CACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAG  100
      |||||||||||||||| |||||||||||||| |||||||||||| ||| |
seq2  CACACCTATGGTCACTAGATCTTCGACAAGGAAGCTAAAACCATGCAGTG  100

seq1  GAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTAT  150

seq1  CATGTAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTC  200
      | |||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CGTGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTC  200

seq1  AAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACT  250

seq1  TATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACA  300
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAA  300

seq1  AATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGAC  350
      |||||||||||||||||||||| | |||||||||||||||||||||||||
seq2  AATTCCTGAACAGAACAGCAATTGTTTGTGCTGTAAGATCGAGAATTGAC  350

seq1  AAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGT  400

seq1  CAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATC  450
      |||||||||||||||||||||||||||| ||||||| |||||||||||||
seq2  CAATAAGACAAAAAGACCACCAACAGATGGGGAAAGAATCTTTACCTATC  450

seq1  CTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAG  500

seq1  GTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCACAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||| ||  
seq2  GTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAA--  548

seq1  CCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAAC  600
                ||| |||||    |||                        
seq2  --------CTGAACAAAGA----ATTC-----------------------  563

seq1  TGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTG  650
                                                        
seq2  --------------------------------------------------  563

seq1  TACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGA  700
                                                        
seq2  --------------------------------------------------  563

seq1  CACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGC  750
                                                        
seq2  --------------------------------------------------  563

seq1  ACAGGGGAAAAATTCCTGAACAGAAGAGCAATGGCTTGTGCTGTAAGATC  800
                                                        
seq2  --------------------------------------------------  563

seq1  GAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAA  850
                                                        
seq2  --------------------------------------------------  563

seq1  AAGACACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATC  900
                                                        
seq2  --------------------------------------------------  563

seq1  TTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGA  950
                                                        
seq2  --------------------------------------------------  563

seq1  ACTCAAGAAGGTGGACCTCAGAAAATCAAATAACCCCATTAAAAAATGGG  1000
                                                        
seq2  --------------------------------------------------  563

seq1  GCTCAGAACTGAACAAAGAATTC  1023
                             
seq2  -----------------------  563

seq1: chr15_21642925_21643959
seq2: B6Ng01-159P10.g_68_1088

seq1  GAATTCTGGGACTGTGTGTGCATATCTTTGTGAATAAAATTTAAATATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGACTGTGTGTGCATATCTTTGTGAATAAAATTTAAATATTT  50

seq1  TGATTTGTTGTTTGTGTGTATAAATTTACATACACATAATTAGTTGAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGTTGTTTGTGTGTATAAATTTACATACACATAATTAGTTGAATT  100

seq1  GCTTGGTGTGGTTCTTATTAGAGAGCAGATTGCAAACCATTTCTTCAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGTGTGGTTCTTATTAGAGAGCAGATTGCAAACCATTTCTTCAACA  150

seq1  TTGAATTATATGTAATTCCTTCGTGATAGAGTCTGCGCTCCAAAAGCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTATATGTAATTCCTTCGTGATAGAGTCTGCGCTCCAAAAGCAGA  200

seq1  GAAAATCTGTTTTTCTTCATGTTTTCCTTTCCTTGATGTCGTCAAACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCTGTTTTTCTTCATGTTTTCCTTTCCTTGATGTCGTCAAACACA  250

seq1  GTCCTAACATTATTTTGAACCTGCTGCTCTTTGTTATCTCTACTATTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAACATTATTTTGAACCTGCTGCTCTTTGTTATCTCTACTATTAAT  300

seq1  GTTTTGATATCATTTTTCTCTTCTTAACATTTTCATCGTCAGTGCATGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGATATCATTTTTCTCTTCTTAACATTTTCATCGTCAGTGCATGTT  350

seq1  TGCGAATCCAAGTACATGTATATGATGTATATATGTGATGTGTATATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGAATCCAAGTACATGTATATGATGTATATATGTGATGTGTATATATT  400

seq1  TATATATTTGTAGGTCAGTGCTGGGTGTTTTCTTCAATCATGCTATCATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATTTGTAGGTCAGTGCTGGGTGTTTTCTTCAATCATGCTATCATA  450

seq1  TTGAGGCATGTCTTAATAAATAAGGTACTTAGACATTTGCTAGAGGAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGCATGTCTTAATAAATAAGGTACTTAGACATTTGCTAGAGGAAGT  500

seq1  CTCCAGTGAACCCATGGAATCCTTCTGTTCCTGACTTCCAAGAAAAGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTGAACCCATGGAATCCTTCTGTTCCTGACTTCCAAGAAAAGAGA  550

seq1  TCATGGGGTCATAAAGTCACCCTGACTTTTATGGGGGTTCTGGACAACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGGGTCATAAAGTCACCCTGACTTTTATGGGGGTTCTGGACAACTA  600

seq1  GATTCTGATTGTCATAACTATACAGCCAGTAATTTCTGAGTTGAACCACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGATTGTCATAACTATACAGCCAGTAATTTCTGAGTTGAACCACC  650

seq1  TCCCCAGTATCCATTTCACAATAATTTATATAATCCTTTCCATG-TTTTG  699
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCCCCAGTATCCATTTCACAATAATTTATATAATCCTTTCCATGTTTTTG  700

seq1  CTGCTCATGAACTTCAATAGTTTATAATGATGCTTCCCTTTGGTTTAGAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCATGAACTTCAATAGTTTATAATGATGCTTCCCTTTGGTTTAGAC  750

seq1  TGTGAAGACATTTATAGTGAAAGTAAGATGGCAAGAACCTAGAAAAAAAC  799
      |||||||||||||||||||||||| ||||||||||| ||||| |||||||
seq2  TGTGAAGACATTTATAGTGAAAGT-AGATGGCAAGACCCTAG-AAAAAAC  798

seq1  TCAGTGGATATT-GTAATGGAGTCCTGACTCAGAAATATGAGGGATGCA-  847
      |||||||||||| ||||||||||||||||| |||| ||||||||||||| 
seq2  TCAGTGGATATTGGTAATGGAGTCCTGACT-AGAATTATGAGGGATGCAT  847

seq1  TGTATCCATTTATATCAGACCTCTAGGCAAGGAGATTGCCCTGGTTAATA  897
      |||||||| ||||||||||| ||||||| |||||||||||||||||||||
seq2  TGTATCCA-TTATATCAGACTTCTAGGC-AGGAGATTGCCCTGGTTAATA  895

seq1  TTCCCAATTTGTATAATCACAAATAATTTTCACTGTATAAAAGTTCTTGT  947
      |||||||||||||||||||||||||||||||||||   ||||||||||| 
seq2  TTCCCAATTTGTATAATCACAAATAATTTTCACTG--AAAAAGTTCTTGG  943

seq1  GTATCTTAAAAGAAAATGTATTGGAAGTTTAAGCAGCAGAACTAGACACA  997
        |||||||    ||||||||||| ||||||||||||  |||||||||| 
seq2  TGATCTTAA---GAAATGTATTGG-AGTTTAAGCAGC--AACTAGACACC  987

seq1  CTAGCAGAGTCATGCTTCATTGAGGTCAATGTGCTAAC  1035
      |||   ||||||||| ||||||||||| ||||||||||
seq2  CTA--CGAGTCATGC-TCATTGAGGTC-ATGTGCTAAC  1021