BAC Information

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BAC

Clone NameB6Ng01-161I01
Chromosome15 (Build37)
Map Location 33,996,801 - 33,997,997
singlet/doubletsinglet
Overlap genenone
Upstream genePgcp, 1700084J12Rik, Tspyl5, LOC675463
Downstream geneMtdh, Laptm4b, Matn2, Rpl30, BC030476, Hrsp12, Pop1, Npal2, Kcns2, Stk3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-161I01.bB6Ng01-161I01.g
ACCDH954596DH954597
length1,1481,129
definitionDH954596|Mus musculus domesticus DNA, BAC clone: B6Ng01-161I01, 5' end.DH954597|Mus musculus domesticus DNA, BAC clone: B6Ng01-161I01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgggtaggtgacttctatgttaatctgttggggccaactctag
ggacattccattaccagggtgttggggctggaaacttgctagggaggtcc
agggactgttactgaggaagtagctgaggaagtctagaaactgatgctga
cccatcgtccttgcctcagggcaagtggcagggcaacttctaggcctggg
cttgcctggacttgcccaattcttggaaacagagatttaggcctagtctc
tttaactgacaatttgaagcctgtcatggaaatagcctagccttcacagt
aggaagagcagctgtagtataaagccaaagcttagctctcagattctgtg
ttcagttcctctgtcagcttctgactgaggtcactaatttacataaactt
ttcgtttcctcagtgggggcagctccctctttccttcccattaaacccca
gaataactcttctcttttacaaagttcaggttttccacgaagtctatgat
gctattcttttccctttcttctaaagatatttatttatcatctctgaaaa
atagttttccttttattagttagtttcacagtgttagaaaacatcgaaaa
atttagctggaaccctagaagctactaggatattggtaaagggcctgggt
tcacctattttaacactcaatggttgtcttagtcttcatgaagtaacatt
gatataaatggcacaacttacccaggaaggcattttaaactcaattatac
taatgtgtgtgtaagtcctaaaaataatagccttaggagacaggcacagt
ggcatatatcagccatcctagccactcagaattctaagccgtgggaaaga
ccagaattttgaggccagccagagctacacagtgagaccctgtctaaaaa
aaagtacaatacactcaaacctcatcattccagctgcagtagtagtgcag
ctttaatgccagcactctctggaccagcagttagatctggtgggtcatgc
agcttgtctacgatgagttcagaacagcagactaccagagaactgtctca
aatgagaaagaaaaagaagtcaaatctacagtactgcttacatctgtttc
gctagtctcccttggatcacaagagcatgtcttactcaacagactggt
gaattctttgtttagctctgtgccagattttttaatggggttatttgaat
ttctggagttcagcttcttgagctctttgtatatattggatattagtccc
ctatcagatttaggattggtaaaaatcctttcacaatctgttggtggcct
ttttatcttattgacagtgtcttttcaggcctcattttcttttgccctac
tgaagctttacaattttatgaggtcccatttgtcaattcttgatcttaca
gcacaagccattgctattctgtttaggaattttttcccttgtgcccatat
cttcgaggcttttccccactttctcctctattaatttcagtgtctctggt
tttatgtggaggtctttgatacacgtagacttgagctctgtacaaggaga
taagaatggatcaatttccattcttctgcatgataaccgccagttatgcc
agcaccatttgttgaaaatgcttttttttccccactggatcattttagct
cccttgtcaaagaccaagtgaccataggtgtgtggattcatttctgggtc
ttcaattctattccattgatctacctgtctgtcactgtagcagtaccgtg
cagtttgtttgtttttttgtttttgttttttttttttttaatcacaattg
ctctgtagtacagcttaatgtcaggcatggtgattccaccagaggttctt
ttattgttgaaaatagtttttgctatcctaggttttttatttttccagat
gaatttgcaaattgccctttctatctcagtgaagaattgagttggaatta
tgatggggattgcattgattctgtagattgctttcagcaggatagccatt
tttactatattaaccctggcaatccatgacatgggagatctttccatctc
tgagttcttttcatttctttctcagagacttgagtcttatcatacagatc
ttcacttccttattagagtccacccagattttatatatttgtgaatatgt
ggaggagttgtttcctaatttcttctagcctgttatcttggtagagaaga
catgattgttgattactttatccgctactgcactgagcgtttccgttgag
tcctgggcgaattggccttataatacact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_33996801_33997997
seq2: B6Ng01-161I01.b_40_1187

seq1  GAATTCCTGGGTAGGTGACTTCTATGTTAATCTGTTGGGGCCAACTCTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGGTAGGTGACTTCTATGTTAATCTGTTGGGGCCAACTCTAG  50

seq1  GGACATTCCATTACCAGGGTGTTGGGGCTGGAAACTTGCTAGGGAGGTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTCCATTACCAGGGTGTTGGGGCTGGAAACTTGCTAGGGAGGTCC  100

seq1  AGGGACTGTTACTGAGGAAGTAGCTGAGGAAGTCTAGAAACTGATGCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTGTTACTGAGGAAGTAGCTGAGGAAGTCTAGAAACTGATGCTGA  150

seq1  CCCATCGTCCTTGCCTCAGGGCAAGTGGCAGGGCAACTTCTAGGCCTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCGTCCTTGCCTCAGGGCAAGTGGCAGGGCAACTTCTAGGCCTGGG  200

seq1  CTTGCCTGGACTTGCCCAATTCTTGGAAACAGAGATTTAGGCCTAGTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTGGACTTGCCCAATTCTTGGAAACAGAGATTTAGGCCTAGTCTC  250

seq1  TTTAACTGACAATTTGAAGCCTGTCATGGAAATAGCCTAGCCTTCACAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTGACAATTTGAAGCCTGTCATGGAAATAGCCTAGCCTTCACAGT  300

seq1  AGGAAGAGCAGCTGTAGTATAAAGCCAAAGCTTAGCTCTCAGATTCTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAGCAGCTGTAGTATAAAGCCAAAGCTTAGCTCTCAGATTCTGTG  350

seq1  TTCAGTTCCTCTGTCAGCTTCTGACTGAGGTCACTAATTTACATAAACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTCCTCTGTCAGCTTCTGACTGAGGTCACTAATTTACATAAACTT  400

seq1  TTCGTTTCCTCAGTGGGGGCAGCTCCCTCTTTCCTTCCCATTAAACCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTTTCCTCAGTGGGGGCAGCTCCCTCTTTCCTTCCCATTAAACCCCA  450

seq1  GAATAACTCTTCTCTTTTACAAAGTTCAGGTTTTCCACGAAGTCTATGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAACTCTTCTCTTTTACAAAGTTCAGGTTTTCCACGAAGTCTATGAT  500

seq1  GCTATTCTTTTCCCTTTCTTCTAAAGATATTTATTTATCATCTCTGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTCTTTTCCCTTTCTTCTAAAGATATTTATTTATCATCTCTGAAAA  550

seq1  ATAGTTTTCCTTTTATTAGTTAGTTTCACAGTGTTAGAAAACATCGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTTCCTTTTATTAGTTAGTTTCACAGTGTTAGAAAACATCGAAAA  600

seq1  ATTTAGCTGGAACCCTAGAAGCTACTAGGATATTGGTAAAGGGCCTGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGCTGGAACCCTAGAAGCTACTAGGATATTGGTAAAGGGCCTGGGT  650

seq1  TCACCTATTTTAACACTCAATGGTTGTCTTAGTCTTCATGAAGTAACATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTATTTTAACACTCAATGGTTGTCTTAGTCTTCATGAAGTAACATT  700

seq1  GATATAAATGGCACAACTTACCCAGGAAGGCATTTTAAACTCAATTATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAAATGGCACAACTTACCCAGGAAGGCATTTTAAACTCAATTATAC  750

seq1  TAATGTGTGTGTAAGTCCTAAAAATAATAGCCTTAGGAGACAGGCACAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGTGTGTAAGTCCTAAAAATAATAGCCTTAGGAGACAGGCACAGT  800

seq1  GGCATATATCAGCCATCCTAGCCACTCAGAATTCTAAGCCGTGGGAAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATATATCAGCCATCCTAGCCACTCAGAATTCTAAGCCGTGGGAAAGA  850

seq1  CCAGAATTTTGAGGCCAGCCAGAGCTACACAGTGAGACCCTGTCTAAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAATTTTGAGGCCAGCCAGAGCTACACAGTGAGACCCTGTCTAAAAA  900

seq1  AAAGTACAATACACTCAAAACCTCATCATTCCAGCCTGCAGTAGTAGTGC  950
      |||||||||||||||| ||||||||||||||||| |||||||||||||||
seq2  AAAGTACAATACACTC-AAACCTCATCATTCCAG-CTGCAGTAGTAGTGC  948

seq1  AAGCCTTTAATGCCAGCACTCTCTGGACACAGGCAGTTAGATCTTGGTGG  1000
      |   |||||||||||||||||||||||| || ||||||||||| ||||||
seq2  A--GCTTTAATGCCAGCACTCTCTGGAC-CA-GCAGTTAGATC-TGGTGG  993

seq1  GTTCAAGGCCAGCCTTGTCTACAGATGAGTTCCAGAACAGCCAGAGCTAC  1050
      | ||| |  ||| ||||||||| |||||||| |||||||| |||| ||||
seq2  G-TCATG--CAG-CTTGTCTAC-GATGAGTT-CAGAACAG-CAGA-CTAC  1035

seq1  ACAGAGAAACCTGTCTCAAAATGAGAAAAAGAAAAAAGAAGTTCAAATCT  1100
       |||||||  ||||||| ||||||||||    ||||||||| ||||||||
seq2  -CAGAGAA--CTGTCTC-AAATGAGAAA---GAAAAAGAAG-TCAAATCT  1077

seq1  ACCAAGTACCTGGTCTTTTCCCATCGTGGTTCCGCTAGTTTCTTCCTCTT  1150
      ||  |||| |||  |||    ||||   ||| ||||||| |    | |||
seq2  AC--AGTA-CTG--CTT---ACATC--TGTTTCGCTAGTCT----CCCTT  1113

seq1  TGATTCAAACAAAAGGAGCATGTCTTACATACCAAAACAGACCTGGT  1197
       |||     || || ||||||||||||     |  |||||| |||||
seq2  GGAT-----CACAA-GAGCATGTCTTA-----CTCAACAGA-CTGGT  1148