BAC Information

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BAC

Clone NameB6Ng01-161K18
Chromosome6 (Build37)15 (Build37)
Map Location 18,835,442 - 18,835,96829,870,768 - 29,871,914
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-161K18.bB6Ng01-161K18.g
ACCDH954721DH954722
length8931,157
definitionDH954721|Mus musculus domesticus DNA, BAC clone: B6Ng01-161K18, 5' end.DH954722|Mus musculus domesticus DNA, BAC clone: B6Ng01-161K18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(29,870,768 - 29,871,914)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgtaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatcttccatcttc
tgagatcttccttaatttcttttcttcagagatttgaggtttt
gaattcatgagggaattcagttacttattttttaatgtacttagaaaatt
aaaagtctaaatgtgctaataagtattaattagtatgtctattctaagta
tgaccttgagaaatggaaattgcagctcacccaattaaatgttggctata
cttagcaggtttaagaagtgagtgaaaaatcagatgttagactgaagaaa
gatagagatatactttacatctaccctaaggaataaaaaaaactatatct
atgaaaaccacatggtatcatatagagtaaacatatgtaagcttcaacca
tcacaataaacactttcttaattatatacagtgctataaacaaaattaat
tgctgccatatgtgtgtggatgcagcatgaaaataaaggggccatgtgag
gatcagaagaacttaatctgtggaggacaatagagaggacaggggacagg
gaaagagcagaggacagaggggaaaagaacatgaaaatgtcataacaaag
tgcattaacctgtattctaactcaaaaaaatgaataaaatttgaagtaag
tttgaagttgagacaattttatacatatatattatgcatatataatttac
atgtatgttatatatatgtaatatgctcatgtgtataaatatatactcaa
acccacctccatcaaaataaattttaattaattaattattaactaattaa
ttgaccttcttcttttgctaacatgggaacctaatttctgtcttgatctc
tgcttctttgggccacgtagctttagtcagttctgttacctgccttcctg
tcacagttatgatgacctaagaaataagctcaaaggtgctgtcatgtgtc
tgagcacactcttcctgtcttgtcctccatcatattggtgtgtttttctg
tcagctcaggtataatagcttcattttgatgtcttccatgctgcagattt
ttctttccctttgacaggagcacaacttttcttgccctcagattcacccc
accagcctcagcttccatcattcacttctaacagccacaggagaacaccc
acattccccaaatagccataggttacgttattatcaattgatttccattt
accgcctgcccaaagtttgttggaatatattttagaaagaaaattttggt
tgttttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-161K18.b_53_580 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCGTGTAGAAGAATGCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr15_29870768_29871914
seq2: B6Ng01-161K18.g_68_1224

seq1  GAATTCATGAGGGAATTCAGTTACTTATTTTTTAATGTACTTAGAAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAGGGAATTCAGTTACTTATTTTTTAATGTACTTAGAAAATT  50

seq1  AAAAGTCTAAATGTGCTAATAAGTATTAATTAGTATGTCTATTCTAAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCTAAATGTGCTAATAAGTATTAATTAGTATGTCTATTCTAAGTA  100

seq1  TGACCTTGAGAAATGGAAATTGCAGCTCACCCAATTAAATGTTGGCTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTGAGAAATGGAAATTGCAGCTCACCCAATTAAATGTTGGCTATA  150

seq1  CTTAGCAGGTTTAAGAAGTGAGTGAAAAATCAGATGTTAGACTGAAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCAGGTTTAAGAAGTGAGTGAAAAATCAGATGTTAGACTGAAGAAA  200

seq1  GATAGAGATATACTTTACATCTACCCTAAGGAATAAAAAAAACTATATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAGATATACTTTACATCTACCCTAAGGAATAAAAAAAACTATATCT  250

seq1  ATGAAAACCACATGGTATCATATAGAGTAAACATATGTAAGCTTCAACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAACCACATGGTATCATATAGAGTAAACATATGTAAGCTTCAACCA  300

seq1  TCACAATAAACACTTTCTTAATTATATACAGTGCTATAAACAAAATTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATAAACACTTTCTTAATTATATACAGTGCTATAAACAAAATTAAT  350

seq1  TGCTGCCATATGTGTGTGGATGCAGCATGAAAATAAAGGGGCCATGTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCCATATGTGTGTGGATGCAGCATGAAAATAAAGGGGCCATGTGAG  400

seq1  GATCAGAAGAACTTAATCTGTGGAGGACAATAGAGAGGACAGGGGACAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGAAGAACTTAATCTGTGGAGGACAATAGAGAGGACAGGGGACAGG  450

seq1  GAAAGAGCAGAGGACAGAGGGGAAAAGAACATGAAAATGTCATAACAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGCAGAGGACAGAGGGGAAAAGAACATGAAAATGTCATAACAAAG  500

seq1  TGCATTAACCTGTATTCTAACTCAAAAAAATGAATAAAATTTGAAGTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTAACCTGTATTCTAACTCAAAAAAATGAATAAAATTTGAAGTAAG  550

seq1  TTTGAAGTTGAGACAATTTTATACATATATATTATGCATATATAATTTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGTTGAGACAATTTTATACATATATATTATGCATATATAATTTAC  600

seq1  ATGTATGTTATATATATGTAATATGCTCATGTGTATAAATATATACTCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGTTATATATATGTAATATGCTCATGTGTATAAATATATACTCAA  650

seq1  ACCCACCTCCATCAAAATAAATTTTAATTAATTAATTATTAACTAATTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACCTCCATCAAAATAAATTTTAATTAATTAATTATTAACTAATTAA  700

seq1  TTGACCTTCTTCTTTTGCTAACAT-GGAACCTAATTTCTGTCTTGATCTC  749
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTGACCTTCTTCTTTTGCTAACATGGGAACCTAATTTCTGTCTTGATCTC  750

seq1  TGCTTCTTT-GGCCACGTAGCTTTAGTCAGTTCTGTTACCTGCCTTCCTG  798
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTTTGGGCCACGTAGCTTTAGTCAGTTCTGTTACCTGCCTTCCTG  800

seq1  TCACAGTTATGATGACCTAAGAAATAAGCTC-AAGGTGCTGTCATGTGTC  847
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCACAGTTATGATGACCTAAGAAATAAGCTCAAAGGTGCTGTCATGTGTC  850

seq1  TGAGCACACTC-TCCTGTC-TGTCCTCCATCAATATTGGTGTGTTTTTCT  895
      ||||||||||| ||||||| ||||||||||| ||||||||||||||||||
seq2  TGAGCACACTCTTCCTGTCTTGTCCTCCATC-ATATTGGTGTGTTTTTCT  899

seq1  GTCAGCTCAGGTATAATGGCTTCA-TTTGATGTC-TCCATGCTGCAGGAT  943
      ||||||||||||||||| |||||| ||||||||| ||||||||||| |||
seq2  GTCAGCTCAGGTATAATAGCTTCATTTTGATGTCTTCCATGCTGCA-GAT  948

seq1  ATTTC-TTCCCTTTGACA-GAGCACAACTTT--CTGCCCCCAGATTCACC  989
       |||| |||||||||||| ||||||||||||   ||||| ||||||||||
seq2  TTTTCTTTCCCTTTGACAGGAGCACAACTTTTCTTGCCCTCAGATTCACC  998

seq1  C--ACAGCCTCAGC-TCCATCCATCACTTCTAACAGCCACAGGAGACACA  1036
      |   |||||||||| ||||||  ||||||||||||||||||||||| |||
seq2  CCACCAGCCTCAGCTTCCATCATTCACTTCTAACAGCCACAGGAGA-ACA  1047

seq1  CAAACA-TACACAAATAG-CATA-GTTACGTATTTATCAA-TGATTCCAA  1082
      |  ||| | | ||||||| |||| |||||||  ||||||| ||||| |  
seq2  CCCACATTCCCCAAATAGCCATAGGTTACGTTATTATCAATTGATTTC-C  1096

seq1  ATTTACAG-CTGCAC-AATTTTGTTTGATTATATTTTTAAGAAAAGAAAA  1130
      |||||| | |||| | || |||||| || ||||||||  || ||||||||
seq2  ATTTACCGCCTGCCCAAAGTTTGTTGGAATATATTTT--AG-AAAGAAAA  1143

seq1  TTTTTGGTTTTGTTTTG  1147
      |||| |   ||||||||
seq2  TTTTGG---TTGTTTTG  1157