BAC Information

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BAC

Clone NameB6Ng01-162B14
Chromosome15 (Build37)
Map Location 81,115,815 - 81,311,243
singlet/doubletdoublet
Overlap geneSlc25a17, St13, Xpnpep3, Dnajb7, Rbx1
Upstream geneCacna1i, Enthd1, Grap2, AW544981, Tnrc6b, Adsl, LOC625672, Rutbc3, Mkl1, LOC675966, Mchr1
Downstream geneEG383080, Ep300, L3mbtl2, Rangap1, Zc3h7b, Tef, LOC667073, Tob2, Phf5a, Aco2, Polr3h, Csdc2, Pmm1, EG545121, 1700029P11Rik, D15Wsu75e, Xrcc6, Nhp2l1, 4930407I10Rik, Mei1, Ccdc134, Srebf2, LOC435145, Tnfrsf13c, Cenpm, 1500009C09Rik, Sept3, Wbp2nl, Naga, C920005C14Rik, 1500032L24Rik, Ndufa6, Cyp2d22, LOC545123, Cyp2d10, Cyp2d9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162B14.bB6Ng01-162B14.g
ACCDH955022DH955023
length1,1121,015
definitionDH955022|Mus musculus domesticus DNA, BAC clone: B6Ng01-162B14, 5' end.DH955023|Mus musculus domesticus DNA, BAC clone: B6Ng01-162B14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,310,134 - 81,311,243)(81,115,815 - 81,116,834)
sequence
gaattcagtcctctatgttgtcctctgtcatctgcatgtacaccatggca
tttgcacaaggacacacgcacacaggcatacgcataatacatatatgtaa
tttttaaaataaaaaacaaagatctggaggcacaggcaggctgatctcta
gttcaaagccagcctggtttatgtagtgagttccaggacagccagggcta
cacagagaaaccctgtctcgaaaataccaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaagaaaaaaagaaagaaagaaagaaagaaagaaaggaagaaaga
aaatctcctgcctgaaacttaagtgtttccctagaactggggttgcaggc
aggcagcttatgagccacactgcgcatgtgctaggaatcaaacctaggtt
ttggcaagaatagccattgcttttgttgttattgtttttcccaagacagg
gtttctgtgtagccctgactgtccgagaacttgatctgcagaccaggctg
gcctctcctgcctctgcctctggagtgctgggattaaaggcatctgccgc
cgcagtctggcagcagccactgcttttaggcaactccatccagtgttgtt
ttctcccatttttttaatgttttcagagtctggtctgatgtagctcaatt
tagtctcaaattactatgcagctgagggtgaacttgaactgcaatcctcc
tgcccccacctcccaatggctgtggttacaggtgtatgcagtgtttgagc
cagtgtctgcctgactccaaagctgataggctcaggtgcagtcccaccac
tgacaccaagcccctcccctccccacgtctttggggttctgattcctcct
cacctccgcgctttacctcttgaagcggacatcatctacaattcagatta
gacttcagtcggctgtagccagacattcccttttcgtttccttaggggag
aagctgtcgagcgaagccgtgaggacatgaccgctacccgtttgttttca
gctgtctatctcttgctttgtttttcaaagctctgtttctaaatataagg
gaaagtcagaagttgaagggcccagtcaacaataaattaagccccttcgt
taacctggggtg
gaattcaaagccaacctgagctcagagaccctgtctcaaaaagtaaagaa
gggactgggatagagcccgctagtagagcataagacccccagtcattcct
cagcgcccccacctctgaaggcgggtttccaaggcacattgattaggtca
ttcatctaggtagaccagaagtctgaattaagaccagaagtctgagttaa
gggttcctcctgcctccgcataccaggattccaggtgtccctcacaatgc
ctgccttgttacgccttatttctctgtatctgaggactgagcacaagtct
ggatcttgtgtagctattgaaccaaggtctatcacataaatgaacctgtg
gacaagcagacaaaactgggtcagcttcttaggatgaagccacccatgtc
acactaatcaaacacgcacaggtggaatgtgcaagaaattgcgatagaaa
gcagaatgccaatattttttctctgcatgaggggcagtgcagggagagtc
ttttgtttcgtgagtctgccggatggtagaatgcttcagctactgggaag
aggactaaaacaaaatttataagtgttgtttataaaattctggtgtaagt
tttctctctggaccaaacctgcataaatacatacaaaaaattaaaaggta
aaataaaactgttgcctgatttcagagcacacacgtgcacatgcgtacgt
gtacacacactcacacacacacacacacacacacacacacacacacacac
acacgagagagagagacagagacagagacagagacagagacagagacaga
caggatcagttaagagtttttgatccaggcaggtgtggtggtgctgtcct
gtaatcccccctaccagggaggtgaggaacgagtaaatctaaaagaaagt
aaatttaaagactaggttatagaattagtttaatgcctgtcgggggcact
tatgagattgccttcattgaaaaaagtaaatatgggaggggctgacaagg
agctcatttggtagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_81310134_81311243
seq2: B6Ng01-162B14.b_47_1158 (reverse)

seq1  CACCCCAGTTTAACGAAGCGCCTTA--TTATTGTTGACTTGGACACTCAA  48
      |||||||| ||||||||| | ||||  |||||||||||| || |  ||||
seq2  CACCCCAGGTTAACGAAGGGGCTTAATTTATTGTTGACTGGGCCCTTCAA  50

seq1  C-TCTGACCTTCCC-TATATTAAGAACCAGAGCTCTGAAAAACAAAGC-A  95
      | |||||| ||||| |||||| |||| ||||||| ||||||||||||| |
seq2  CTTCTGACTTTCCCTTATATTTAGAAACAGAGCTTTGAAAAACAAAGCAA  100

seq1  GAGATAGAACAAGCTGAAAACAAACGGGTAGGCGGTCATGGTCCTCACGG  145
      ||||||||   ||||||||||||||||||| |||||||| ||||||||||
seq2  GAGATAGA--CAGCTGAAAACAAACGGGTA-GCGGTCAT-GTCCTCACGG  146

seq1  CTTCGCTCGACAGCTTCTCCCCTAAGGAAACGGAAAGGGAATGTCTGGCT  195
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTTCGCTCGACAGCTTCTCCCCTAAGGAAACGAAAAGGGAATGTCTGGCT  196

seq1  ACAGCCGAACTGAAGTCTAATCTGGATTGTAGATGATGT-CGCTTCAAGA  244
      ||||||| |||||||||||||||| |||||||||||||| ||||||||||
seq2  ACAGCCG-ACTGAAGTCTAATCTGAATTGTAGATGATGTCCGCTTCAAGA  245

seq1  GGTAAAGCGC-GAGGTGAGGAGGAATCAGAACACCAAAGACGTGGGGAGG  293
      |||||||||| ||||||||||||||||||||| |||||||||||||||||
seq2  GGTAAAGCGCGGAGGTGAGGAGGAATCAGAACCCCAAAGACGTGGGGAGG  295

seq1  GGAGGGGCTTGGTGTCAGTGGTGGGACTGCACCTGAGCCTATCAGCTTTG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGGCTTGGTGTCAGTGGTGGGACTGCACCTGAGCCTATCAGCTTTG  345

seq1  GAGTCAGGCAGACACTGGCTCAAACACTGCATACACCTGTAACCACAGCC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGGCAGACACTGGCTCAAACACTGCATACACCTGTAACCACAGCC  395

seq1  ATTGGGAGGTGGGGGCAGGAGGATTGCAGTTCAAGTTCACCCTCAGCTGC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGAGGTGGGGGCAGGAGGATTGCAGTTCAAGTTCACCCTCAGCTGC  445

seq1  ATAGTAATTTGAGACTAAATTGAGCTACATCAGACCAGACTCTGAAAACA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAATTTGAGACTAAATTGAGCTACATCAGACCAGACTCTGAAAACA  495

seq1  TTAAAAAAATGGGAGAAAACAACACTGGATGGAGTTGCCTAAAAGCAGTG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAATGGGAGAAAACAACACTGGATGGAGTTGCCTAAAAGCAGTG  545

seq1  GCTGCTGCCAGACTGCGGCGGCAGATGCCTTTAATCCCAGCACTCCAGAG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGCCAGACTGCGGCGGCAGATGCCTTTAATCCCAGCACTCCAGAG  595

seq1  GCAGAGGCAGGAGAGGCCAGCCTGGTCTGCAGATCAAGTTCTCGGACAGT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGCAGGAGAGGCCAGCCTGGTCTGCAGATCAAGTTCTCGGACAGT  645

seq1  CAGGGCTACACAGAAACCCTGTCTTGGGAAAAACAATAACAACAAAAGCA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTACACAGAAACCCTGTCTTGGGAAAAACAATAACAACAAAAGCA  695

seq1  ATGGCTATTCTTGCCAAAACCTAGGTTTGATTCCTAGCACATGCGCAGTG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTATTCTTGCCAAAACCTAGGTTTGATTCCTAGCACATGCGCAGTG  745

seq1  TGGCTCATAAGCTGCCTGCCTGCAACCCCAGTTCTAGGGAAACACTTAAG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCATAAGCTGCCTGCCTGCAACCCCAGTTCTAGGGAAACACTTAAG  795

seq1  TTTCAGGCAGGAGATTTTCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGCAGGAGATTTTCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTT  845

seq1  CTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTATTTTCGA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTATTTTCGA  895

seq1  GACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTACATAAA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTACATAAA  945

seq1  CCAGGCTGGCTTTGAACTAGAGATCAGCCTGCCTGTGCCTCCAGATCTTT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTGGCTTTGAACTAGAGATCAGCCTGCCTGTGCCTCCAGATCTTT  995

seq1  GTTTTTTATTTTAAAAATTACATATATGTATTATGCGTATGCCTGTGTGC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTATTTTAAAAATTACATATATGTATTATGCGTATGCCTGTGTGC  1045

seq1  GTGTGTCCTTGTGCAAATGCCATGGTGTACATGCAGATGACAGAGGACAA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTCCTTGTGCAAATGCCATGGTGTACATGCAGATGACAGAGGACAA  1095

seq1  CATAGAGGACTGAATTC  1110
      |||||||||||||||||
seq2  CATAGAGGACTGAATTC  1112

seq1: chr15_81115815_81116834
seq2: B6Ng01-162B14.g_67_1081

seq1  GAATTCAAAGCCAACCTGAGCTCAGAGACCCTGTCTCAAAAAGTAAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGCCAACCTGAGCTCAGAGACCCTGTCTCAAAAAGTAAAGAA  50

seq1  GGGACTGGGATAGAGCCCGCTAGTAGAGCATAAGACCCCCAGTCATTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTGGGATAGAGCCCGCTAGTAGAGCATAAGACCCCCAGTCATTCCT  100

seq1  CAGCGCCCCCACCTCTGAAGGCGGGTTTCCAAGGCACATTGATTAGGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGCCCCCACCTCTGAAGGCGGGTTTCCAAGGCACATTGATTAGGTCA  150

seq1  TTCATCTAGGTAGACCAGAAGTCTGAATTAAGACCAGAAGTCTGAGTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTAGGTAGACCAGAAGTCTGAATTAAGACCAGAAGTCTGAGTTAA  200

seq1  GGGTTCCTCCTGCCTCCGCATACCAGGATTCCAGGTGTCCCTCACAATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCCTCCTGCCTCCGCATACCAGGATTCCAGGTGTCCCTCACAATGC  250

seq1  CTGCCTTGTTACGCCTTATTTCTCTGTATCTGAGGACTGAGCACAAGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTGTTACGCCTTATTTCTCTGTATCTGAGGACTGAGCACAAGTCT  300

seq1  GGATCTTGTGTAGCTATTGAACCAAGGTCTATCACATAAATGAACCTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTGTGTAGCTATTGAACCAAGGTCTATCACATAAATGAACCTGTG  350

seq1  GACAAGCAGACAAAACTGGGTCAGCTTCTTAGGATGAAGCCACCCATGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGCAGACAAAACTGGGTCAGCTTCTTAGGATGAAGCCACCCATGTC  400

seq1  ACACTAATCAAACACGCACAGGTGGAATGTGCAAGAAATTGCGATAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAATCAAACACGCACAGGTGGAATGTGCAAGAAATTGCGATAGAAA  450

seq1  GCAGAATGCCAATATTTTTTCTCTGCATGAGGGGCAGTGCAGGGAGAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAATGCCAATATTTTTTCTCTGCATGAGGGGCAGTGCAGGGAGAGTC  500

seq1  TTTTGTTTCGTGAGTCTGCCGGATGGTAGAATGCTTCAGCTACTGGGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTCGTGAGTCTGCCGGATGGTAGAATGCTTCAGCTACTGGGAAG  550

seq1  AGGACTAAAACAAAATTTATAAGTGTTGTTTATAAAATTCTGGTGTAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTAAAACAAAATTTATAAGTGTTGTTTATAAAATTCTGGTGTAAGT  600

seq1  TTTCTCTCTGGACCAAACCTGCATAAATACATACAAAAAATTAAAAGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTCTGGACCAAACCTGCATAAATACATACAAAAAATTAAAAGGTA  650

seq1  AAATAAAACTGTTGCCTGATTTCAGAGCACACACGTGCACATGCGTACGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAACTGTTGCCTGATTTCAGAGCACACACGTGCACATGCGTACGT  700

seq1  GTACACACACACACACACACACACACACACACACACACACACACACACAC  750
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTACACACACTCACACACACACACACACACACACACACACACACACACAC  750

seq1  ACACGAGAGAGAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGAGAGAGAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGA  800

seq1  CAGGATCAGTTAAGAGTATTTGATCCAGGCAGGTGTGGTGGTGCTGTCCT  850
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CAGGATCAGTTAAGAGTTTTTGATCCAGGCAGGTGTGGTGGTGCTGTCCT  850

seq1  GTAATCCCCCCTACCAGGGAGGTTGAGGAACGAGTAAATTTAAAAGAAAG  900
      |||||||||||||||||||||| |||||||||||||||| ||||||||||
seq2  GTAATCCCCCCTACCAGGGAGG-TGAGGAACGAGTAAATCTAAAAGAAAG  899

seq1  TAAATTTAAAGACTAGGTTATAGAATTAGTTTAAGGCCTGTCGGGGCCAC  950
      |||||||||||||||||||||||||||||||||| ||||||||||| |||
seq2  TAAATTTAAAGACTAGGTTATAGAATTAGTTTAATGCCTGTCGGGGGCAC  949

seq1  TTAATGAGACTTGCCTTCATTGAAAAAAGTAAAGAGTGGGAGGGGCTGAG  1000
      || |||||| ||||||||||||||||||||||| | ||||||||||||| 
seq2  TT-ATGAGA-TTGCCTTCATTGAAAAAAGTAAATA-TGGGAGGGGCTGA-  995

seq1  CAAGGAGCTCAGTTGGTAGC  1020
      ||||||||||| ||||||||
seq2  CAAGGAGCTCATTTGGTAGC  1015