BAC Information

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BAC

Clone NameB6Ng01-162J04
Chromosome15 (Build37)
Map Location 26,539,869 - 26,690,566
singlet/doubletdoublet
Overlap geneFbxl7, LOC622531
Upstream geneMyo10, LOC100040602, Ppia-ps15_175.1, 1810015C04Rik, Zfp622, AK162044
Downstream geneLOC625311, Ank, BC087945, LOC100040622, BC052328, Trio
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162J04.bB6Ng01-162J04.g
ACCDH955380DH955381
length1,0901,163
definitionDH955380|Mus musculus domesticus DNA, BAC clone: B6Ng01-162J04, 5' end.DH955381|Mus musculus domesticus DNA, BAC clone: B6Ng01-162J04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,689,515 - 26,690,566)(26,539,869 - 26,541,040)
sequence
gaattcacaaatctaaatataaaaaaaatccaaatgtcaaaaaaatggac
taatcaagtgatcacatcatttccaaaagatgaatttcaaatagcagata
aacaagaaaacatgttacacatccttagccatcaaagaaatgcaaagtaa
tgttacattgagaccctacctcacatcagtcagattggctatctttgaga
aatcaaataaaaactgctggaaaatatttgtgtgggggaaggaaggcatt
gtacacattgccagtgagattgtaaatcaatccagctatcagggaaatca
gtctggagctcactcaaaataattaaaatagaaatactgcctgacccagc
tatgccactattgggtatacaagcgaaggattttacattggcatccctca
tacacatagccattcttattactggctacagtattcaaggtataatgagg
ctggatgtctttcagtccttgaatggataaagaatacattcatatccaca
caattgagggtttttaaaatatccaaccatgaaaaacaaaatgatatcct
ttattataaatacatatgcaaatatagatcatcatattatggaagctgca
tgtttattacaatatatagattagtggatagaaaggaaagggtatgagtg
tgcatatggtcaaaatgcacaaaatatttagttaggaatatctatagaaa
acataattttgtatattaatatatgacaatgagatttttataatggaaag
acatcacttttaaaaggtcaagaatgctacgagcttgaagacaacatctg
taaaatgttgaagaacaccagtgcagaaaagatgagcaattatttttctg
gatccttcctcagaaagggagatcaatgacaaataggtgcataaaataaa
taccaatatcagcagtaactagggaattgtgggttacacattaccctgag
acatcacctattagaatagtaaagttatgagatttaaaagtgcactgtga
cctgtcagtctggatctggacattagacactcaacaccacatacagacgc
aaatagctctgaaaaaatattttctgaagctaaaattcac
gaattccagaaaactatgaaatttgacaatcccacttttatttattcact
acatgcagtgatttgaaacaatgacattatagaaattgatttgcttcctg
aagactgctttcttctaattctttgttgttgttgagtggaatttttaaaa
gatttacttatttattatgtatacagtgttctgtctgcatgtatccctgc
atgccaagagagggcatcaaatctcattataggtggttgggaactgccat
gtggttgctgtgaattgaactcaggacctctgaaaaagtggccatcactc
cagctccttcttttcattattaagggttttttcatattctcaaatattta
acaaatcaaacacattgtaggctatattcatggcctttttattgattcaa
gaatttgctgagctcatattatgtggggacatacagcaggaaacagaaga
tgccatcttttaatatatagaacttctatttgtacaagaaaaagagaata
agccagccaactaacatgtgtgattgctgtgattaaaatgttatgaagaa
tataaagtgcaacaaataatgtgggagcttattttttgccaaacagttaa
aataaaataacacacacacacacacacacacacacacacacacacacaca
cacacacgtatacagaggagatgatcaagaaagatcatactaaatgaagc
tcatacaaaatatttcttttattagaaatatgttcagtattgtatatgac
tttgtctttgtagggaaaatagaagtgtttttatttccagtactacaata
aggcccaaattaaatgcgttaatagtcctaatgcaaaggactggttcatg
aaatgaactttaattttatttattacttgaaaaatgtattcatgtgtgaa
tgtgatctatatatatgtgttcacatgtgtatttatttgcacatgagtac
attcgtatgtgaagactgagttggcagctgattatctgactgtttttcac
ttttgtgtatgagttagggtctctcattgaacccaatcttgaatatccct
gcagtctagctagcaggtttgctcagacattctgacaatacttttcatgc
aatagataacaagagggccacatttgaccaactgtgtggtgcatctggcg
atcctaactttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_26689515_26690566
seq2: B6Ng01-162J04.b_96_1135 (reverse)

seq1  GTGAATTTTTAGCTTTCAGAAAATAATTTTTTTCAGAGCTATTTGCCTTC  50
      ||||| ||||||| |||||||||||  |||||||||||||||||| | ||
seq2  GTGAA-TTTTAGC-TTCAGAAAATA--TTTTTTCAGAGCTATTTG-CGTC  45

seq1  TGTATGTGGTGGTTGAGTGTTCTAATGGTCCAGATCCAGACTGACAGGTC  100
      |||||||||| |||||||| |||||| |||||||||||||||||||||||
seq2  TGTATGTGGT-GTTGAGTG-TCTAAT-GTCCAGATCCAGACTGACAGGTC  92

seq1  ACAGTGCACCTTTTAAATCTCATTAACTTTAACTATTCTAATAGGTGATG  150
      |||||||| ||||||||||||| ||||||| |||||||||||||||||||
seq2  ACAGTGCA-CTTTTAAATCTCA-TAACTTT-ACTATTCTAATAGGTGATG  139

seq1  TCTCAGGGTAATGTGTAACCCACAATTCCCTAGTTACTGCTGATATTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGGTAATGTGTAACCCACAATTCCCTAGTTACTGCTGATATTGGT  189

seq1  ATTTATTTTATGCACCTATTTGTCATTGATCTCCCTTTCTGAGGAAGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTTATGCACCTATTTGTCATTGATCTCCCTTTCTGAGGAAGGAT  239

seq1  CCAGAAAAATAATTGCTCATCTTTTTCTGCACTGGTGTTCTTCAACATTT  300
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCAGAAAAATAATTGCTCATC-TTTTCTGCACTGGTGTTCTTCAACATTT  288

seq1  TACAGATGTTGTCTTCAAGCTCGTAGCATTCTTGACCTTTTAAAAGTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATGTTGTCTTCAAGCTCGTAGCATTCTTGACCTTTTAAAAGTGAT  338

seq1  GTCTTTCCATTATAAAAATCTCATTGTCATATATTAATATACAAAATTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTCCATTATAAAAATCTCATTGTCATATATTAATATACAAAATTAT  388

seq1  GTTTTCTATAGATATTCCTAACTAAATATTTTGTGCATTTTGACCATATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTATAGATATTCCTAACTAAATATTTTGTGCATTTTGACCATATG  438

seq1  CACACTCATACCCTTTCCTTTCTATCCACTAATCTATATATTGTAATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTCATACCCTTTCCTTTCTATCCACTAATCTATATATTGTAATAAA  488

seq1  CATGCAGCTTCCATAATATGATGATCTATATTTGCATATGTATTTATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGCTTCCATAATATGATGATCTATATTTGCATATGTATTTATAAT  538

seq1  AAAGGATATCATTTTGTTTTTCATGGTTGGATATTTTAAAAACCCTCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATATCATTTTGTTTTTCATGGTTGGATATTTTAAAAACCCTCAAT  588

seq1  TGTGTGGATATGAATGTATTCTTTATCCATTCAAGGACTGAAAGACATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGATATGAATGTATTCTTTATCCATTCAAGGACTGAAAGACATCC  638

seq1  AGCCTCATTATACCTTGAATACTGTAGCCAGTAATAAGAATGGCTATGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCATTATACCTTGAATACTGTAGCCAGTAATAAGAATGGCTATGTG  688

seq1  TATGAGGGATGCCAATGTAAAATCCTTCGCTTGTATACCCAATAGTGGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGGGATGCCAATGTAAAATCCTTCGCTTGTATACCCAATAGTGGCA  738

seq1  TAGCTGGGTCAGGCAGTATTTCTATTTTAATTATTTTGAGTGAGCTCCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGGGTCAGGCAGTATTTCTATTTTAATTATTTTGAGTGAGCTCCAG  788

seq1  ACTGATTTCCCTGATAGCTGGATTGATTTACAATCTCACTGGCAATGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATTTCCCTGATAGCTGGATTGATTTACAATCTCACTGGCAATGTGT  838

seq1  ACAATGCCTTCCTTCCCCCACACAAATATTTTCCAGCAGTTTTTATTTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCCTTCCTTCCCCCACACAAATATTTTCCAGCAGTTTTTATTTGA  888

seq1  TTTCTCAAAGATAGCCAATCTGACTGATGTGAGGTAGGGTCTCAATGTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAAAGATAGCCAATCTGACTGATGTGAGGTAGGGTCTCAATGTAA  938

seq1  CATTACTTTGCATTTCTTTGATGGCTAAGGATGTGTAACATGTTTTCTTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACTTTGCATTTCTTTGATGGCTAAGGATGTGTAACATGTTTTCTTG  988

seq1  TTTATCTGCTATTTGAAATTCATCTTTTGGAAATGATGTGATCACTTGAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTGCTATTTGAAATTCATCTTTTGGAAATGATGTGATCACTTGAT  1038

seq1  TA  1052
      ||
seq2  TA  1040

seq1: chr15_26539869_26541040
seq2: B6Ng01-162J04.g_66_1228

seq1  GAATTCCAGAAAACTATGAAATTTGACAATCCCACTTTTATTTATTCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAAAACTATGAAATTTGACAATCCCACTTTTATTTATTCACT  50

seq1  ACATGCAGTGATTTGAAACAATGACATTATAGAAATTGATTTGCTTCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCAGTGATTTGAAACAATGACATTATAGAAATTGATTTGCTTCCTG  100

seq1  AAGACTGCTTTCTTCTAATTCTTTGTTGTTGTTGAGTGGAATTTTTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGCTTTCTTCTAATTCTTTGTTGTTGTTGAGTGGAATTTTTAAAA  150

seq1  GATTTACTTATTTATTATGTATACAGTGTTCTGTCTGCATGTATCCCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTACTTATTTATTATGTATACAGTGTTCTGTCTGCATGTATCCCTGC  200

seq1  ATGCCAAGAGAGGGCATCAAATCTCATTATAGGTGGTTGGGAACTGCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAAGAGAGGGCATCAAATCTCATTATAGGTGGTTGGGAACTGCCAT  250

seq1  GTGGTTGCTGTGAATTGAACTCAGGACCTCTGAAAAAGTGGCCATCACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTGCTGTGAATTGAACTCAGGACCTCTGAAAAAGTGGCCATCACTC  300

seq1  CAGCTCCTTCTTTTCATTATTAAGGGTTTTTTCATATTCTCAAATATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCTTCTTTTCATTATTAAGGGTTTTTTCATATTCTCAAATATTTA  350

seq1  ACAAATCAAACACATTGTAGGCTATATTCATGGCCTTTTTATTGATTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCAAACACATTGTAGGCTATATTCATGGCCTTTTTATTGATTCAA  400

seq1  GAATTTGCTGAGCTCATATTATGTGGGGACATACAGCAGGAAACAGAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGCTGAGCTCATATTATGTGGGGACATACAGCAGGAAACAGAAGA  450

seq1  TGCCATCTTTTAATATATAGAACTTCTATTTGTACAAGAAAAAGAGAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATCTTTTAATATATAGAACTTCTATTTGTACAAGAAAAAGAGAATA  500

seq1  AGCCAGCCAACTAACATGTGTGATTGCTGTGATTAAAATGTTATGAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCCAACTAACATGTGTGATTGCTGTGATTAAAATGTTATGAAGAA  550

seq1  TATAAAGTGCAACAAATAATGTGGGAGCTTATTTTTTGCCAAACAGTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGTGCAACAAATAATGTGGGAGCTTATTTTTTGCCAAACAGTTAA  600

seq1  AATAAAATAACACACACACACACACACACACACACACACACACACACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATAACACACACACACACACACACACACACACACACACACACACA  650

seq1  CACACACGTATACAGAGGAGATGATCAAGAAAGATCATACTAAATGAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACGTATACAGAGGAGATGATCAAGAAAGATCATACTAAATGAAGC  700

seq1  TCATACAAAATATTTC-TTTATTAGAAATATGTTCAGTATTGTATATGAC  749
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TCATACAAAATATTTCTTTTATTAGAAATATGTTCAGTATTGTATATGAC  750

seq1  TTTGTCTTTGTAGGGAAAATAGAAGTGTTTTTATTTCCAGTACTACAATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTTGTAGGGAAAATAGAAGTGTTTTTATTTCCAGTACTACAATA  800

seq1  AGGCCCAAATTAAATGCGTTAATAGTCCTAATGCAAAGGACTGGTTCATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCAAATTAAATGCGTTAATAGTCCTAATGCAAAGGACTGGTTCATG  850

seq1  AAATGAACTTTAATTTTATTTATTTACTTGAAAAATGTATTCATGTGTGA  899
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAATGAACTTTAATTTTATTTA-TTACTTGAAAAATGTATTCATGTGTGA  899

seq1  ATGTGATCTATATATATGTGTTCACATGTGTATTTATTTGCACATGAGTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGATCTATATATATGTGTTCACATGTGTATTTATTTGCACATGAGTA  949

seq1  CATTCGTATGTGAAGACTGAGGTTGGCAGCTGATATCCTGACTGTTTTTC  999
      |||||||||||||||||||| |||||||||||||   |||||||||||||
seq2  CATTCGTATGTGAAGACTGA-GTTGGCAGCTGATTATCTGACTGTTTTTC  998

seq1  AC-TTTGTGTATTGAGTTAGGGTCTCTCATTGAACCCAAATCTTG-ATAT  1047
      || |||||||| ||||||||||||||||||||||||| ||||||| ||||
seq2  ACTTTTGTGTA-TGAGTTAGGGTCTCTCATTGAACCC-AATCTTGAATAT  1046

seq1  CCCTGCCAGTCTAGCTAGCAGGTTTGCTCCAAGGACATCTTGACAATACC  1097
      ||||| |||||||||||||||||||||||    |||||  ||||||||| 
seq2  CCCTG-CAGTCTAGCTAGCAGGTTTGCTC---AGACATTCTGACAATACT  1092

seq1  TTTCATGCAATAGATAACAAGAGGGCCACCATGTTGACACAACGTGTGT-  1146
      |||||||||||||||||||||||||||| ||| ||||| |||| ||||| 
seq2  TTTCATGCAATAGATAACAAGAGGGCCA-CAT-TTGAC-CAAC-TGTGTG  1138

seq1  GTGCATCTGGCGATCCTAACTCTTGT  1172
      ||||||||||||||||||||| ||||
seq2  GTGCATCTGGCGATCCTAACT-TTGT  1163