BAC Information

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BAC

Clone NameB6Ng01-162O03
Chromosome15 (Build37)3 (Build37)
Map Location 69,974,115 - 69,975,26836,712,306 - 36,712,338
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC383050
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162O03.bB6Ng01-162O03.g
ACCDH955608DH955609
length1,151194
definitionDH955608|Mus musculus domesticus DNA, BAC clone: B6Ng01-162O03, 5' end.DH955609|Mus musculus domesticus DNA, BAC clone: B6Ng01-162O03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(69,974,115 - 69,975,268)(36,712,306 - 36,712,338)
sequence
gaattcctgtgagattcctcctgccccaaattgctttagccacagtaata
tttattgtatattatcatattctaaattacttttcttgtttcatttttcc
ctgtccttaatcatcaggcacctcgtcccagtcagtgacaatttcaagga
gtattctctgttttgcatacgggtattaaattgatattcttttagaatct
gtgcttcgggggatgcagccattcatttccttttttatcagtcactcatt
caatatgtgcctcttgcaaatcagagctggatgagccactgagagacaag
ctacagtgataggcatgcctgcttcccatcggggttgaaaagctcagtca
aggatgaggtctgaccactcatttgaagaagcttggactttacagagata
aagtgacttaggaaaatgacacagctagtaaatagctaagcaatcatagt
agaaaccacattttttcctgttttctccttgctgcatacgtatacaaact
ctcattagtgagataatacatcttgattatattgcattagtttgtaagac
cttaggttagacttttctatccattggaaactatgccaattttaggctta
tgcagggcatgtttctgattctgcttgtgtgataattctgagtcagttat
actatatcctcttcctcgggcttttcttatgatgtacatggcctatacat
ggattttaaaacttaatgttactttttaacactgtggtcaccgtgttttt
taaacgttattctagtgaattggattttgatattctcctcatcccaattt
attttctgcttctgtgaaaacatggccatcaggaggttaggttcttatcc
aagcttcagtttacagattacaattttagcagtgtggtatgtaaccttgg
gccatctgactagggataacgtggtgggttgaataggtatggcccaatag
actcatgtgtttcaaggatgacccatagagaagtggcactactaggatgt
atggccttgttagaaataggtgtgggctttgttggaggaaatatgttact
ggacaaggcagactttgaagtcttctttgctcaagcctggcccagttgga
gttggtatcctgctgctgcatgtgactcagaatagacttcagccccttct
c
tttgtgtggttctgtacccattttttaaattgagttaacttctggagact
aacttcttgagttctctgtatattttggatattagccctctatctaatgg
agggctggtaaagatcttttcccaatctgtcaattgctgttttgtcctat
tgacagtggtgttttgttttgtttggtttggtttggtttggttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_69974115_69975268
seq2: B6Ng01-162O03.b_45_1195 (reverse)

seq1  GAGAAGGGGCTGAGAGTTCTATTCTTGAGTCACATGCAGCAAGCAGGATA  50
      ||||||||||||| || ||||||| ||||||||||||||| |||||||||
seq2  GAGAAGGGGCTGA-AG-TCTATTC-TGAGTCACATGCAGC-AGCAGGATA  46

seq1  CACACTTCCACACTGGGCAGGGCTTGAGCATAGAAGACTTCAAAGTCTGC  100
      | ||  |||| |||||||  |||||||||| |||||||||||||||||||
seq2  C-CAACTCCA-ACTGGGCCAGGCTTGAGCAAAGAAGACTTCAAAGTCTGC  94

seq1  CCTGT-CAGTAACATATTTCCTCCAACAAAG-CCACACCTA-TTCTAACA  147
      | ||| ||||||||||||||||||||||||| ||||||||| ||||||||
seq2  CTTGTCCAGTAACATATTTCCTCCAACAAAGCCCACACCTATTTCTAACA  144

seq1  AGGCCATACATCCTAGTAGTGCCAC-TCTCTATGGGTCATCCTTGAAACA  196
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGGCCATACATCCTAGTAGTGCCACTTCTCTATGGGTCATCCTTGAAACA  194

seq1  CATGAGTCTATTGGGGCCATACCTATTCAACCCACCACGTTATCCCTAGT  246
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CATGAGTCTATT-GGGCCATACCTATTCAACCCACCACGTTATCCCTAGT  243

seq1  CAGATGGCCCAAGGTTACATACCACACTGCTAAAATTGTAATCTGTAAAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGCCCAAGGTTACATACCACACTGCTAAAATTGTAATCTGTAAAC  293

seq1  TGAAGCTTGGATAAGAACCTAACCTCCTGATGGCCATGTTTTCACAGAAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTTGGATAAGAACCTAACCTCCTGATGGCCATGTTTTCACAGAAG  343

seq1  CAGAAAATAAATTGGGATGAGGAGAATATCAAAATCCAATTCACTAGAAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATAAATTGGGATGAGGAGAATATCAAAATCCAATTCACTAGAAT  393

seq1  AACGTTTAAAAAACACGGTGACCACAGTGTTAAAAAGTAACATTAAGTTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTTTAAAAAACACGGTGACCACAGTGTTAAAAAGTAACATTAAGTTT  443

seq1  TAAAATCCATGTATAGGCCATGTACATCATAAGAAAAGCCCGAGGAAGAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCCATGTATAGGCCATGTACATCATAAGAAAAGCCCGAGGAAGAG  493

seq1  GATATAGTATAACTGACTCAGAATTATCACACAAGCAGAATCAGAAACAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAGTATAACTGACTCAGAATTATCACACAAGCAGAATCAGAAACAT  543

seq1  GCCCTGCATAAGCCTAAAATTGGCATAGTTTCCAATGGATAGAAAAGTCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGCATAAGCCTAAAATTGGCATAGTTTCCAATGGATAGAAAAGTCT  593

seq1  AACCTAAGGTCTTACAAACTAATGCAATATAATCAAGATGTATTATCTCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAAGGTCTTACAAACTAATGCAATATAATCAAGATGTATTATCTCA  643

seq1  CTAATGAGAGTTTGTATACGTATGCAGCAAGGAGAAAACAGGAAAAAATG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGAGAGTTTGTATACGTATGCAGCAAGGAGAAAACAGGAAAAAATG  693

seq1  TGGTTTCTACTATGATTGCTTAGCTATTTACTAGCTGTGTCATTTTCCTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTCTACTATGATTGCTTAGCTATTTACTAGCTGTGTCATTTTCCTA  743

seq1  AGTCACTTTATCTCTGTAAAGTCCAAGCTTCTTCAAATGAGTGGTCAGAC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTTTATCTCTGTAAAGTCCAAGCTTCTTCAAATGAGTGGTCAGAC  793

seq1  CTCATCCTTGACTGAGCTTTTCAACCCCGATGGGAAGCAGGCATGCCTAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCCTTGACTGAGCTTTTCAACCCCGATGGGAAGCAGGCATGCCTAT  843

seq1  CACTGTAGCTTGTCTCTCAGTGGCTCATCCAGCTCTGATTTGCAAGAGGC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTAGCTTGTCTCTCAGTGGCTCATCCAGCTCTGATTTGCAAGAGGC  893

seq1  ACATATTGAATGAGTGACTGATAAAAAAGGAAATGAATGGCTGCATCCCC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTGAATGAGTGACTGATAAAAAAGGAAATGAATGGCTGCATCCCC  943

seq1  CGAAGCACAGATTCTAAAAGAATATCAATTTAATACCCGTATGCAAAACA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGCACAGATTCTAAAAGAATATCAATTTAATACCCGTATGCAAAACA  993

seq1  GAGAATACTCCTTGAAATTGTCACTGACTGGGACGAGGTGCCTGATGATT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATACTCCTTGAAATTGTCACTGACTGGGACGAGGTGCCTGATGATT  1043

seq1  AAGGACAGGGAAAAATGAAACAAGAAAAGTAATTTAGAATATGATAATAT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACAGGGAAAAATGAAACAAGAAAAGTAATTTAGAATATGATAATAT  1093

seq1  ACAATAAATATTACTGTGGCTAAAGCAATTTGGGGCAGGAGGAATCTCAC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAAATATTACTGTGGCTAAAGCAATTTGGGGCAGGAGGAATCTCAC  1143

seq1  AGGAATTC  1154
      ||||||||
seq2  AGGAATTC  1151

seq1: chr3_36712306_36712338
seq2: B6Ng01-162O03.g_238_270 (reverse)

seq1  AAACAAAACCAAACCAAACCAAACAAAACAAAA  33
      |||| ||||||||||||||||||||||||||||
seq2  AAACCAAACCAAACCAAACCAAACAAAACAAAA  33