BAC Information

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BAC

Clone NameB6Ng01-163E12
Chromosome15 (Build37)
Map Location 24,967,378 - 25,138,309
singlet/doubletdoublet
Overlap gene9230109A22Rik
Upstream geneLOC666989, LOC666999, LOC100040492, LOC100040499, LOC100040529
Downstream gene4930445E18Rik, Basp1, EG432939, LOC100040583, Myo10, LOC100040602, Ppia-ps15_175.1, 1810015C04Rik, Zfp622
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163E12.bB6Ng01-163E12.g
ACCDH955909DH955910
length1,0941,212
definitionDH955909|Mus musculus domesticus DNA, BAC clone: B6Ng01-163E12, 5' end.DH955910|Mus musculus domesticus DNA, BAC clone: B6Ng01-163E12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,137,218 - 25,138,309)(24,967,378 - 24,968,612)
sequence
gaattctcagatgtttctcagttctacattgcagagtgattttgaaaccc
attggttctgtattatgccataaaacacaagatattccaaatttctcagc
tttattaggacaggactataaatgaagatagagcaacaaaaggcagaaac
tacaatcacttttcacttgtaatttttgttttgattacaaaaaagggaag
tctgacatcggtatttatcattcaccacaattttaaaacgtcagaagaga
tgtgttactcagaatagtcaaaggaataccttttatgaaatattataatt
tatcactatcaaatttcatttcgtgtcagaatgcttaactagtcttagtg
ccataagaaaacattttgtttcctttttatagtaaaatatgctaaggtct
aatttatgtgcaaacctgttacacttcactgcactgtagtgaagtgtaaa
cttcaatgaatattgataatgccttgcacatgcccgtgggaccaccatca
taatccagacacaaattagtctcgtcatcccaaagtattccctgggatcc
tgtgaccccaaatgaattttgtaacatttagaattttctttttccttttt
taattttaatttttgagataggttatcactatgcagccttgactgctttg
gaactcattatgtaaaccagggtttgagatatctcagactctgagagatc
tgcctgcctctgctttccaagtgatgggattaaaggtgtgtgtgactcca
agcctggtgtagaagacacttgaaactgggacatttgaggataatttgtg
ttgattttttgcccaaatgtctattttacttcttgttttcatctatctta
aacatttgtgttagcatctcagcaacatcatagctacctaagtattgaat
aataaggtttctctagtttcataggtttaggaggtttcggtctgtgacca
gttcctgtgacttaggattctagttgcatatcatctagttgcacttcatt
ccaggagtatcgtcgttgagcagagtaattccctattttattcagaaaat
atgtgggagaggaaacagagagagaaaatggggtagggagggaa
gaattcaagggaggtgatcccattacattcacagtcaggaaacaagaagc
tgtgattacttagtgctctgttttatactgtccaggatccaagccagagg
aatggcactactcctagtgagcacatgttctgatgttacactttgcttaa
accaatcaaaataatctcctgttcccaaggtgactgaagacatgaagaag
ttggcaactggaactatacctatcagtttcaattattgatattatttgta
attgtgaatttaaatatactatgagcattagttaacatattatttctagt
aaaagaaaattaaaccatttttaaggatgccagtcatcacttttaaactt
tgacttcactttaatcattcttatttgtaatttggcaactataagaaata
agtcaattcatgccctcatgtaatactttcttatgatacaggcctgatat
atttaaataatgtcgctactatttttttcatttttaatttattactttct
tattctcagggtttgtaattgtttccagttatttgtgctgcttgaatcac
taaagtgattatgtctaaaagaacataaatgtatgaataattgagtgagt
taatgaagtctgaggtatctcaccagacaatgaaaatctgtaagatatca
cgaatgcagtgttcattgcataagcaatgtgggattcttctaccattaag
cagaggctctggatcatgaaaatggcactacaggcatacaagtcccctca
gcagaagctcatcaatattttcaaaacacatcccattcttcttgtgctca
tttgaggtacattagcaagcttttaagttctctgtttctgaattatgtcc
ttgtctttaatctttgacctcctatatttcaaaatacattaaagtagcaa
ttagatcctcccttcttaggatttatgctgatcaggcagttggctttccc
ttggaagctaataagactcattttttcttcccatgcttggtatagtaaag
cttttgcttaaatacgttaaatataaaactttgtgaagctagccaacttc
agttaaaacttgaccaaagagatgttaatgagaactgacaaagtggtgaa
ttgggaaaactcaatggtttctctttattcattttaaccaatattgaatt
tttccttttttgtggttagggaactttttttataggattcctcattaact
tctaatgctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_25137218_25138309
seq2: B6Ng01-163E12.b_46_1139 (reverse)

seq1  TTCCCTCCCT-CCCCATCTCCTCTCTCTGTCTCCTCT-CCACTATTTTTC  48
      |||||||||| |||||| | |||||||||| |||||| ||||   |||||
seq2  TTCCCTCCCTACCCCATTTTCTCTCTCTGTTTCCTCTCCCACATATTTTC  50

seq1  TGAAT-ATATAGTGAATTACTCTGCTCAACGACGTTACT-CTGGAATGAT  96
      ||||| | |||| ||||||||||||||||||||| |||| ||||||||| 
seq2  TGAATAAAATAGGGAATTACTCTGCTCAACGACGATACTCCTGGAATGAA  100

seq1  GTGCAACTAGATGATATGCAACTAGAATCCTAAAGTCACAGGAACTGGTC  146
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTGCAACTAGATGATATGCAACTAGAATCCT-AAGTCACAGGAACTGGTC  149

seq1  ACAGACCGAAACCTCCTAAACCTATGAAACTAGAGAAACCTTATTATTTC  196
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ACAGACCGAAACCTCCTAAACCTATGAAACTAGAGAAACCTTATTA-TTC  198

seq1  AATACTTAGGTAGCTATGATGTTGCTGAGATGCTAACACAAATGTTTAAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTAGGTAGCTATGATGTTGCTGAGATGCTAACACAAATGTTTAAG  248

seq1  ATAGATGAAAACAAGAAGTAAAATAGACATTTGGGCAAAAAATCAACACA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGAAAACAAGAAGTAAAATAGACATTTGGGCAAAAAATCAACACA  298

seq1  AATTATCCTCAAATGTCCCAGTTTCAAGTGTCTTCTACACCAGGCTTGGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCCTCAAATGTCCCAGTTTCAAGTGTCTTCTACACCAGGCTTGGA  348

seq1  GTCACACACACCTTTAATCCCATCACTTGGAAAGCAGAGGCAGGCAGATC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACACACACCTTTAATCCCATCACTTGGAAAGCAGAGGCAGGCAGATC  398

seq1  TCTCAGAGTCTGAGATATCTCAAACCCTGGTTTACATAATGAGTTCCAAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGAGTCTGAGATATCTCAAACCCTGGTTTACATAATGAGTTCCAAA  448

seq1  GCAGTCAAGGCTGCATAGTGATAACCTATCTCAAAAATTAAAATTAAAAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCAAGGCTGCATAGTGATAACCTATCTCAAAAATTAAAATTAAAAA  498

seq1  AGGAAAAAGAAAATTCTAAATGTTACAAAATTCATTTGGGGTCACAGGAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAAGAAAATTCTAAATGTTACAAAATTCATTTGGGGTCACAGGAT  548

seq1  CCCAGGGAATACTTTGGGATGACGAGACTAATTTGTGTCTGGATTATGAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGGAATACTTTGGGATGACGAGACTAATTTGTGTCTGGATTATGAT  598

seq1  GGTGGTCCCACGGGCATGTGCAAGGCATTATCAATATTCATTGAAGTTTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTCCCACGGGCATGTGCAAGGCATTATCAATATTCATTGAAGTTTA  648

seq1  CACTTCACTACAGTGCAGTGAAGTGTAACAGGTTTGCACATAAATTAGAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCACTACAGTGCAGTGAAGTGTAACAGGTTTGCACATAAATTAGAC  698

seq1  CTTAGCATATTTTACTATAAAAAGGAAACAAAATGTTTTCTTATGGCACT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCATATTTTACTATAAAAAGGAAACAAAATGTTTTCTTATGGCACT  748

seq1  AAGACTAGTTAAGCATTCTGACACGAAATGAAATTTGATAGTGATAAATT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTAGTTAAGCATTCTGACACGAAATGAAATTTGATAGTGATAAATT  798

seq1  ATAATATTTCATAAAAGGTATTCCTTTGACTATTCTGAGTAACACATCTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATTTCATAAAAGGTATTCCTTTGACTATTCTGAGTAACACATCTC  848

seq1  TTCTGACGTTTTAAAATTGTGGTGAATGATAAATACCGATGTCAGACTTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACGTTTTAAAATTGTGGTGAATGATAAATACCGATGTCAGACTTC  898

seq1  CCTTTTTTGTAATCAAAACAAAAATTACAAGTGAAAAGTGATTGTAGTTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTTGTAATCAAAACAAAAATTACAAGTGAAAAGTGATTGTAGTTT  948

seq1  CTGCCTTTTGTTGCTCTATCTTCATTTATAGTCCTGTCCTAATAAAGCTG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTTTGTTGCTCTATCTTCATTTATAGTCCTGTCCTAATAAAGCTG  998

seq1  AGAAATTTGGAATATCTTGTGTTTTATGGCATAATACAGAACCAATGGGT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTGGAATATCTTGTGTTTTATGGCATAATACAGAACCAATGGGT  1048

seq1  TTCAAAATCACTCTGCAATGTAGAACTGAGAAACATCTGAGAATTC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAATCACTCTGCAATGTAGAACTGAGAAACATCTGAGAATTC  1094

seq1: chr15_24967378_24968612
seq2: B6Ng01-163E12.g_67_1278

seq1  GAATTCAAGGGAGGTGATCCCATTACATTCACAGTCAGGAAACAAGAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGGAGGTGATCCCATTACATTCACAGTCAGGAAACAAGAAGC  50

seq1  TGTGATTACTTAGTGCTCTGTTTTATACTGTCCAGGATCCAAGCCAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTACTTAGTGCTCTGTTTTATACTGTCCAGGATCCAAGCCAGAGG  100

seq1  AATGGCACTACTCCTAGTGAGCACATGTTCTGATGTTACACTTTGCTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCACTACTCCTAGTGAGCACATGTTCTGATGTTACACTTTGCTTAA  150

seq1  ACCAATCAAAATAATCTCCTGTTCCCAAGGTGACTGAAGACATGAAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATCAAAATAATCTCCTGTTCCCAAGGTGACTGAAGACATGAAGAAG  200

seq1  TTGGCAACTGGAACTATACCTATCAGTTTCAATTATTGATATTATTTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAACTGGAACTATACCTATCAGTTTCAATTATTGATATTATTTGTA  250

seq1  ATTGTGAATTTAAATATACTATGAGCATTAGTTAACATATTATTTCTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGAATTTAAATATACTATGAGCATTAGTTAACATATTATTTCTAGT  300

seq1  AAAAGAAAATTAAACCATTTTTAAGGATGCCAGTCATCACTTTTAAACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAATTAAACCATTTTTAAGGATGCCAGTCATCACTTTTAAACTT  350

seq1  TGACTTCACTTTAATCATTCTTATTTGTAATTTGGCAACTATAAGAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTCACTTTAATCATTCTTATTTGTAATTTGGCAACTATAAGAAATA  400

seq1  AGTCAATTCATGCCCTCATGTAATACTTTCTTATGATACAGGCCTGATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATTCATGCCCTCATGTAATACTTTCTTATGATACAGGCCTGATAT  450

seq1  ATTTAAATAATGTCGCTACTATTTTTTTCATTTTTAATTTATTACTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATAATGTCGCTACTATTTTTTTCATTTTTAATTTATTACTTTCT  500

seq1  TATTCTCAGGGTTTGTAATTGTTTCCAGTTATTTGTGCTGCTTGAATCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCAGGGTTTGTAATTGTTTCCAGTTATTTGTGCTGCTTGAATCAC  550

seq1  TAAAGTGATTATGTCTAAAAGAACATAAATGTATGAATAATTGAGTGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTGATTATGTCTAAAAGAACATAAATGTATGAATAATTGAGTGAGT  600

seq1  TAATGAAGTCTGAGGTATCTCACCAGACAATGAAAATCTGTAAGATATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAGTCTGAGGTATCTCACCAGACAATGAAAATCTGTAAGATATCA  650

seq1  CGAATGCAGTGTTCATTGCATAAGCAATGTGGGATTCTTCTACCATTAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATGCAGTGTTCATTGCATAAGCAATGTGGGATTCTTCTACCATTAAG  700

seq1  CAGAGGCTCTGGATCATGAAAATGGCACTACAGGCATACAAGTCCCCTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCTCTGGATCATGAAAATGGCACTACAGGCATACAAGTCCCCTCA  750

seq1  GCAGAAGCTCATCAATATTTTCAAAACACATCCCATTCTTCTTGTGCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGCTCATCAATATTTTCAAAACACATCCCATTCTTCTTGTGCTCA  800

seq1  TTTGAGGTACATTAGCAAGCTTATTAAGTTCTCTG-TTCTGAATTATGTC  849
      |||||||||||||||||||||| |||||||||||| ||||||||||||||
seq2  TTTGAGGTACATTAGCAAGCTT-TTAAGTTCTCTGTTTCTGAATTATGTC  849

seq1  CTTGTCTTTAATCTTTGACCTCCTAATATTTCAAAATACATTAAGGTAGC  899
      |||||||||||||||||||||||| ||||||||||||||||||| |||||
seq2  CTTGTCTTTAATCTTTGACCTCCT-ATATTTCAAAATACATTAAAGTAGC  898

seq1  AATTAGATCCTCCCTTCTTCAGGATTTTATGCTGATCAGGCAGTTGGCTC  949
      ||||||||||||||||||| |||| |||||||||||||||||||||||| 
seq2  AATTAGATCCTCCCTTCTT-AGGA-TTTATGCTGATCAGGCAGTTGGCTT  946

seq1  TCCCTTGGAAGCTTAATAAGACTCA-TTTTTCTTCCCATGCTTGGTATAG  998
      |||||||||||| |||||||||||| ||||||||||||||||||||||||
seq2  TCCCTTGGAAGC-TAATAAGACTCATTTTTTCTTCCCATGCTTGGTATAG  995

seq1  TAAGGCTTTTGCTTAAAATAGGTAAATATAACACTCTGTGAAGCTAGCCA  1048
      ||| |||||||||||||   | ||||||||| ||| ||||||||||||||
seq2  TAAAGCTTTTGCTTAAATACGTTAAATATAAAACTTTGTGAAGCTAGCCA  1045

seq1  ACATCAGTAAAAACATGACCAAAAAGAGATGTAGAAGGAAGACTGAACAA  1098
      || ||||| ||||| |||||  ||||||||||  || ||  ||||   | 
seq2  ACTTCAGTTAAAACTTGACC--AAAGAGATGT-TAATGAGAACTG---AC  1089

seq1  AAAGT-GTGAATTGTGAAAAACTCAATGGTTTTTCATTATTCATTTTAAA  1147
      ||||| |||||||| | ||||||||||||||| || ||||||||||||| 
seq2  AAAGTGGTGAATTG-GGAAAACTCAATGGTTTCTCTTTATTCATTTTAA-  1137

seq1  CCTAATAAATTGAAATTTTTCATTTTTTGT-GTTAGGGAAACATTTTTTT  1196
       | |||  |||| |||||||| |||||||| |||||||||   |||||||
seq2  -CCAAT--ATTG-AATTTTTCCTTTTTTGTGGTTAGGGAA--CTTTTTTT  1181

seq1  AAATTAGGTATTTTCCTCATTTACATTTCAAATGCTCTC  1235
      |   ||||    ||||||||| ||  ||| |||||||||
seq2  A---TAGG---ATTCCTCATTAAC--TTCTAATGCTCTC  1212