BAC Information

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BAC

Clone NameB6Ng01-164E14
Chromosome15 (Build37)3 (Build37)
Map Location 70,330,974 - 70,332,124128,801,371 - 128,801,622
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC383050
Downstream geneLOC383051, 1700010C24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164E14.bB6Ng01-164E14.g
ACCDH956653DH956654
length1,1311,009
definitionDH956653|Mus musculus domesticus DNA, BAC clone: B6Ng01-164E14, 5' end.DH956654|Mus musculus domesticus DNA, BAC clone: B6Ng01-164E14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(70,330,974 - 70,332,124)(128,801,371 - 128,801,622)
sequence
gaattctggagatagaaaccctaggaaagaaatcagcaacaatcaaagaa
aatgcaaaatgcaaaaagatcctaactcaaaatattgaggaaatccagag
caaaatgagaagaccaaacctacggataataggagtagatgagaatgaag
attttcaacttaaaggaccagaaaatatcttcaacaaaatcacagaagaa
aactttccatacctaaagaaagagatgcccatgaacatacaagaagccta
cagaactccaagtaggctggaccagaaaagaaattcctcctaggggactt
tcgggatagcatttaaaatgtaaataaaaacaaaaaaatctaataaaaat
tggaaaaaaaagaaaagcacagtgttcaaatgatggaaattcttcagatt
attgtaaaccccagagaaattactatccaaagttcataggaattttaaca
tacctttcccataagcagcatggaaaaatccattcagagaccaacactgt
aggtcttggagctgttcatgtaggtatgggaagagagaattgcagcaatg
gggtgaagcagcaaaaggcccaccaaattcactcatgcttagctttacag
ctgtttataggactagctttctctttattgacgacaagataaatgtgcta
atttccaggagaatccttatgcagtgtatgggttggacaatgtattcgaa
caattcttatggtagctttcatgtataaaaattgagagcatcattttcaa
ggaaatgacacttgggaatgtcccaaatcgacagcttactaaaaatcaag
agaggttagcttccttatccactcatatattactaggtgttttgggggga
gtacacttatatttggccacatctatgagatacactacaaaaattaatgt
atgattgataatgtgggttctatatgtaattagagacttggaatgctgag
ataaaagggtcaggatttcaaaccatctctagctatgtagggagcttcgg
accagtccagaaagactacctggtgcattatctcaaaacaagctaatgat
gcatttaaattttttacattttgtaaatttttaactattactaatcgaaa
ctctcccctctgacgccccctccccattctt
gaattccacataaacatcatatttgcaaactttaatgaaataaaaatttc
caaatgggactagagagatggctcgggagttaagagcactggatgctctt
ccagagatcctgagttcaattcccagcaaccacatggtggctcacaacca
tctgtaattgtatccaatgccctcttcacataaaataaatacatattttt
taaaaattaaaatataattttaactgaagtagagttcacaagttattaat
gaaaacatgttttgtaagaaaatattaattgggcaatagtttcaatgttt
atagacatgtattaagcagatttccatactgaatttttatcattaagaat
ccacttgcggcctcagcatctgcaggagacatcttggatctgggactcca
cagaaagtggtctgcacaggtgagagtgtgcactacagaagctaacagca
gccgggtggttggtggcacacgcctttagtcccagcacttgggaggcaga
ggcaggcggatttctgagttcgaggccagcctggtctacaaagtgagttc
caggacagccagggctacacagagaaaccctgtctcgaaaaacaaaaaca
aggtgctaacagcttctgggacaggcaggagccacagagcttctgaggca
gcccccttttcaggctccagacatctggccacctttctggccagagaata
ggtgcccgtgccgcctggagggctttgcctcagcatcagtggaagccatc
ttggttccaggactcctccgaaagtagtttgcacaagtgagagtatgcac
tacaaaagctaacagcttctgggacaggcaggagccacagagcttctgag
gcagcccccttttcgggctccagaaacccaggcaccttcccagctagagg
ataggtgtccctccagcctggggagggtttgcctcagattcagcagagcc
attttggttccgggactccaccaaagtagtctgcacaggtgagagtgccc
actacagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_70330974_70332124
seq2: B6Ng01-164E14.b_49_1179

seq1  GAATTCTGGAGATAGAAACCCTAGGAAAGAAATCAGCAACAATCAAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGAGATAGAAACCCTAGGAAAGAAATCAGCAACAATCAAAGAA  50

seq1  AATGCAAAATGCAAAAAGATCCTAACTCAAAATATTGAGGAAATCCAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAAAATGCAAAAAGATCCTAACTCAAAATATTGAGGAAATCCAGAG  100

seq1  CAAAATGAGAAGACCAAACCTACGGATAATAGGAGTAGATGAGAATGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGAGAAGACCAAACCTACGGATAATAGGAGTAGATGAGAATGAAG  150

seq1  ATTTTCAACTTAAAGGACCAGAAAATATCTTCAACAAAATCACAGAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAACTTAAAGGACCAGAAAATATCTTCAACAAAATCACAGAAGAA  200

seq1  AACTTTCCATACCTAAAGAAAGAGATGCCCATGAACATACAAGAAGCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTCCATACCTAAAGAAAGAGATGCCCATGAACATACAAGAAGCCTA  250

seq1  CAGAACTCCAAGTAGGCTGGACCAGAAAAGAAATTCCTCCTAGGGGACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACTCCAAGTAGGCTGGACCAGAAAAGAAATTCCTCCTAGGGGACTT  300

seq1  TCGGGATAGCATTTAAAATGTAAATAAAAACAAAAAAATCTAATAAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGATAGCATTTAAAATGTAAATAAAAACAAAAAAATCTAATAAAAAT  350

seq1  TGGAAAAAAAAGAAAAGCACAGTGTTCAAATGATGGAAATTCTTCAGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAAAAAGAAAAGCACAGTGTTCAAATGATGGAAATTCTTCAGATT  400

seq1  ATTGTAAACCCCAGAGAAATTACTATCCAAAGTTCATAGGAATTTTAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAAACCCCAGAGAAATTACTATCCAAAGTTCATAGGAATTTTAACA  450

seq1  TACCTTTCCCATAAGCAGCATGGAAAAATCCATTCAGAGACCAACACTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTCCCATAAGCAGCATGGAAAAATCCATTCAGAGACCAACACTGT  500

seq1  AGGTCTTGGAGCTGTTCATGTAGGTATGGGAAGAGAGAATTGCAGCAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTGGAGCTGTTCATGTAGGTATGGGAAGAGAGAATTGCAGCAATG  550

seq1  GGGTGAAGCAGCAAAAGGCCCACCAAATTCACTCATGCTTAGCTTTACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGAAGCAGCAAAAGGCCCACCAAATTCACTCATGCTTAGCTTTACAG  600

seq1  CTGTTTATAGGACTAGCTTTCTCTTTATTGACGACAAGATAAATGTGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTATAGGACTAGCTTTCTCTTTATTGACGACAAGATAAATGTGCTA  650

seq1  ATTTCCAGGAGAATCCTTATGCAGTGTATGGGTTGGACAATGTATTCGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCAGGAGAATCCTTATGCAGTGTATGGGTTGGACAATGTATTCGAA  700

seq1  CAATTCTTATGGTAGCTTTCATGTATAAAAATTGAGAGCATCA-TTTCAA  749
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CAATTCTTATGGTAGCTTTCATGTATAAAAATTGAGAGCATCATTTTCAA  750

seq1  GGAAATGACACTTGGGAATGTCCCAAATCGACAGCTTACTAAAAATCAAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGACACTTGGGAATGTCCCAAATCGACAGCTTACTAAAAATCAAG  800

seq1  AGAGGTTAGCTTCCTTATCCACTCATATATTACTAGGTGTTTTGGGGGGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTTAGCTTCCTTATCCACTCATATATTACTAGGTGTTTTGGGGGGA  850

seq1  GTACACTTATATTTGGCCACATCTATGAGATACACTACAAAAATTAATGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACTTATATTTGGCCACATCTATGAGATACACTACAAAAATTAATGT  900

seq1  ATGATTGATAATGTGGGTCCTATATGTAATTAGAGACTTGGAATGCTGAG  949
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATGATTGATAATGTGGGTTCTATATGTAATTAGAGACTTGGAATGCTGAG  950

seq1  ATAAAAGGGTCAGGATTTCAAAACCATCTCTAGCTATGTAGGGAGTTTCA  999
      ||||||||||||||||||| ||||||||||||||||||||||||| ||| 
seq2  ATAAAAGGGTCAGGATTTC-AAACCATCTCTAGCTATGTAGGGAGCTTCG  999

seq1  GACCAGTCAAGAAAGACTACCTGGTGCATTATCTCAAAACAAAGCTAAAT  1049
      |||||||| ||||||||||||||||||||||||||||||| ||||| |||
seq2  GACCAGTCCAGAAAGACTACCTGGTGCATTATCTCAAAAC-AAGCT-AAT  1047

seq1  GATGCATTTTAAATTTTTTTACATTTTTCTAATATTTTTTAACTTATTTA  1099
      |||||||||  || |||||||||||||   ||   |||||||||   |||
seq2  GATGCATTT--AAATTTTTTACATTTTGTAAA---TTTTTAACT--ATTA  1090

seq1  CTTTATATCCTGATAACCTCTCCCCTCCTGGTCGCCCCCTCCCACAATTC  1149
      ||    |||     || ||||||||||   | ||||||||||  | ||||
seq2  CT---AATC----GAAACTCTCCCCTC--TGACGCCCCCTCC--CCATTC  1129

seq1  TT  1151
      ||
seq2  TT  1131

seq1: chr3_128801371_128801622
seq2: B6Ng01-164E14.g_361_667

seq1  ATGTTTATAGACATGT-----------------------------TCATT  21
      ||||||||||||||||                             |||||
seq2  ATGTTTATAGACATGTATTAAGCAGATTTCCATACTGAATTTTTATCATT  50

seq1  CATACATTCCCTT------------------------TTCTTTGTTCTTG  47
       | | || | |||                         |||| | ||| |
seq2  AAGA-ATCCACTTGCGGCCTCAGCATCTGCAGGAGACATCTTGGATCTGG  99

seq1  CA---CACTGAA------CTTTAATGATGATAGCGT---CTTTAGAATAT  85
       |   ||| |||      ||  |  | ||| || ||   ||  ||||   
seq2  GACTCCACAGAAAGTGGTCTGCACAGGTGAGAGTGTGCACTACAGAA---  146

seq1  GCT-TCA-TAGTCAGGCAG-TAGTGGCACACACCTTTAATCCCAGCACTT  132
      |||  ||  || | ||  | | ||||||||| |||||| |||||||||||
seq2  GCTAACAGCAGCCGGGTGGTTGGTGGCACACGCCTTTAGTCCCAGCACTT  196

seq1  GGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA  182
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA  246

seq1  AAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAA  232
      ||||||||||||||||||||||||||||||||||||||||||||||    
seq2  AAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTC----  292

seq1  AAAATAAAAAATAAAAACAA  252
            ||||| ||||||||
seq2  -----GAAAAACAAAAACAA  307