BAC Information

Click to search

BAC

Clone NameB6Ng01-164F14
Chromosome15 (Build37)
Map Location 100,868,552 - 100,981,010
singlet/doubletdoublet
Overlap geneScn8a, EG668225, Ankrd33, Acvrl1
Upstream gene4930478M13Rik, Dip2b, Atf1, 4930478A21Rik, EG432981, Mettl7a, ENSMUSG00000058057, LOC554292, Ubie, Yghl1-4, Slc11a2, EG432982, Letmd1, BC035295, Tcfcp2, Pou6f1, Dazap2, BC004728, Bin2, Ela1, Galnt6, Slc4a8
Downstream geneAcvr1b, Grasp, Nr4a1, 9430023L20Rik, 6030408B16Rik, Krt80, Krt7, Krt85, Krt83, 1700011A15Rik, 5430421N21Rik, EG574415, Krt84, Krt82, 4732456N10Rik, Krt75, EG432985, EG432986, EG406223, EG432987, Krt6b, Krt6a, Krt5, Krt71, Krt74, Krt72, Krt73, Krt2, LOC100043001, Krt1, Krt77, Krt76, Krt4, Krt79, Krt78, Krt8, Krt18, LOC676882, Eif4b, Tenc1, Spryd3, Igfbp6, Soat2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164F14.bB6Ng01-164F14.g
ACCDH956699DH956700
length1,079845
definitionDH956699|Mus musculus domesticus DNA, BAC clone: B6Ng01-164F14, 5' end.DH956700|Mus musculus domesticus DNA, BAC clone: B6Ng01-164F14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,868,552 - 100,869,630)(100,980,167 - 100,981,010)
sequence
gaattctccaaaataggaattgcagacagttgtgagccatcacgtggttg
ctgggaattgaacccaggttctctagaagagcagtgagtgctcttaacca
ctgagccacctctccagccccaatttttattttattattttgtgtgcatg
tatagctgtgtaccatgtgcatgcaatgccctggaggtcagaagttgttg
gagcccctgtaactgaagttatgggtaggatgtgcacaactatgtgggtg
cagggattggaacctgggtcttctgcatgaacaacaagggcttttaacca
ctgtaccatctctccagcccttctcttctggcttaaaaccatcagggcag
agatttttgagttctgaagctgaagtctcaatacacttccctggttaaaa
gcttcgtgtgagtgggtgctcatcttgtctccttggcccttaaaaggcag
aaagtagggctgatgtagagagaacacctcccgctgctggccttccttcc
atggccttccttggactctccctgcctccaccacccccagctcccgcctc
tgcctctaccccccagtcactccctagttttaagacaggttatctgtgta
aactgagtcacaggaatggaaagagaaaggggagccagatgttcacttca
cctctacctttgcctccaaccccagcctgcatgctccctgctttgaaacc
cttctgatgtacagctttcagttcaaaaatcttggggcaccaagcagtag
ccaccctgggcagcccactttagtctccaaggcaagctctctcatggaga
tgggggatgagaaacaaagactagggatgttctgagaagtcagagcatcc
gcagagtaattaggacaggaagccaaagggtagcatgtcacaggggagtg
tctcactccctgcttggtagatttagaaatctggtggagaatatttgaga
gctgcatattgcacgtgctgaaaaagtggatcttgagcaggaaaggaaag
atctgcctttgttttagccataggaagggtaatgcaaaggcatttttatc
tgaggaccagtcttggcagacagaccgat
gaattccacttctcagaacgtatagattcgctggaagagagcagactgat
gtttgttctggtttactcgctaagcatgatacaaggccagaatttggaaa
taatcaaaacttccaaacaaacggagacaaactatggaatactacattgt
actaaaaataaaatgaaagttatctacactatatataaatccctcgaaga
tagattattaactgggtagagtaaggtacaggatattgtgtaccatgtgc
ttattattttgaaggatgtggagcaaaaatacacattcagatctactcgt
gcaaatagaaagccgttctagaggaacagcaacgtaagaaactgatgccc
gtggtttcctttggggacttgagagcccagaccagagaccaaagagccgc
gaggatggggagccgacgccacaccagccaaatctgttttagaactgggt
actgactgtgtacatctcccaaaaataaccccggggcttaggcctcttgc
tcagttgtagagagattgcctaacatgtctgaggcctcgggcttcacttc
agcactgcaaaataaaagcaaccaatgctaagagaaacagtgacttatgc
tttcgcaccggaaggaaaaaataaaccaaactaaacaaaaagtatcagat
cttcttcggctggagtcggttgtgagctccggtgtgggtgctgggaacca
accctcctcctctgcaagagccgccagtgttcttaaccaggcacctagat
ttccgctaggattaaaaccctttgcttgggctggagagatggctcatcag
ttaagggcatggactgctcttctaaaggtcttgagttcaattcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_100868552_100869630
seq2: B6Ng01-164F14.b_48_1126

seq1  GAATTCTCCAAAATAGGAATTGCAGACAGTTGTGAGCCATCACGTGGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAAAATAGGAATTGCAGACAGTTGTGAGCCATCACGTGGTTG  50

seq1  CTGGGAATTGAACCCAGGTTCTCTAGAAGAGCAGTGAGTGCTCTTAACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAATTGAACCCAGGTTCTCTAGAAGAGCAGTGAGTGCTCTTAACCA  100

seq1  CTGAGCCACCTCTCCAGCCCCAATTTTTATTTTATTATTTTGTGTGCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCACCTCTCCAGCCCCAATTTTTATTTTATTATTTTGTGTGCATG  150

seq1  TATAGCTGTGTACCATGTGCATGCAATGCCCTGGAGGTCAGAAGTTGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCTGTGTACCATGTGCATGCAATGCCCTGGAGGTCAGAAGTTGTTG  200

seq1  GAGCCCCTGTAACTGAAGTTATGGGTAGGATGTGCACAACTATGTGGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCCTGTAACTGAAGTTATGGGTAGGATGTGCACAACTATGTGGGTG  250

seq1  CAGGGATTGGAACCTGGGTCTTCTGCATGAACAACAAGGGCTTTTAACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATTGGAACCTGGGTCTTCTGCATGAACAACAAGGGCTTTTAACCA  300

seq1  CTGTACCATCTCTCCAGCCCTTCTCTTCTGGCTTAAAACCATCAGGGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACCATCTCTCCAGCCCTTCTCTTCTGGCTTAAAACCATCAGGGCAG  350

seq1  AGATTTTTGAGTTCTGAAGCTGAAGTCTCAATACACTTCCCTGGTTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTGAGTTCTGAAGCTGAAGTCTCAATACACTTCCCTGGTTAAAA  400

seq1  GCTTCGTGTGAGTGGGTGCTCATCTTGTCTCCTTGGCCCTTAAAAGGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCGTGTGAGTGGGTGCTCATCTTGTCTCCTTGGCCCTTAAAAGGCAG  450

seq1  AAAGTAGGGCTGATGTAGAGAGAACACCTCCCGCTGCTGGCCTTCCTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGGGCTGATGTAGAGAGAACACCTCCCGCTGCTGGCCTTCCTTCC  500

seq1  ATGGCCTTCCTTGGACTCTCCCTGCCTCCACCACCCCCAGCTCCCGCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTTCCTTGGACTCTCCCTGCCTCCACCACCCCCAGCTCCCGCCTC  550

seq1  TGCCTCTACCCCCCAGTCACTCCCTAGTTTTAAGACAGGTTATCTGTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTACCCCCCAGTCACTCCCTAGTTTTAAGACAGGTTATCTGTGTA  600

seq1  AACTGAGTCACAGGAATGGAAAGAGAAAGGGGAGCCAGATGTTCACTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGTCACAGGAATGGAAAGAGAAAGGGGAGCCAGATGTTCACTTCA  650

seq1  CCTCTACCTTTGCCTCCAACCCCAGCCTGCATGCTCCCTGCTTTGAAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACCTTTGCCTCCAACCCCAGCCTGCATGCTCCCTGCTTTGAAACC  700

seq1  CTTCTGATGTACAGCTTTCAGTTCAAAAATCTTGGGGCACCAAGCAGTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGATGTACAGCTTTCAGTTCAAAAATCTTGGGGCACCAAGCAGTAG  750

seq1  CCACCCTGGGCAGCCCACTTTAGTCTCCAAGGCAAGCTCTCTCATGGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTGGGCAGCCCACTTTAGTCTCCAAGGCAAGCTCTCTCATGGAGA  800

seq1  TGGGGGATGAGAAACAAAGACTA-GGATGTTCTGAGAAGTCAGAGCATCC  849
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGGGGGATGAGAAACAAAGACTAGGGATGTTCTGAGAAGTCAGAGCATCC  850

seq1  GCAGAGTAATTAGGACAGGAAGCCAAAGGGTAGCATGTCACAGGGGAGTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGTAATTAGGACAGGAAGCCAAAGGGTAGCATGTCACAGGGGAGTG  900

seq1  TCTCACTCCCTGC-TCGTAGATTTAGAAATCTGGTGGAGAATATTTGAGA  948
      ||||||||||||| | ||||||||||||||||||||||||||||||||||
seq2  TCTCACTCCCTGCTTGGTAGATTTAGAAATCTGGTGGAGAATATTTGAGA  950

seq1  GCTGCATA-TGCACGTGCTGAAAAAGTGGATCCTTGAGCAGGAAAGGAAA  997
      |||||||| |||||||||||||||||||||| ||||||||||||||||||
seq2  GCTGCATATTGCACGTGCTGAAAAAGTGGAT-CTTGAGCAGGAAAGGAAA  999

seq1  GATCTG-CTTTGTTTTAGCCATAGGAAGGGATAATGCAAAAGCCATTTTT  1046
      |||||| ||||||||||||||||||||||| |||||| |||| |||||||
seq2  GATCTGCCTTTGTTTTAGCCATAGGAAGGG-TAATGC-AAAGGCATTTTT  1047

seq1  ATCTGAGGAACCAGTCTT-GCAGACAAAACCGAT  1079
      |||||||| ||||||||| |||||| | ||||||
seq2  ATCTGAGG-ACCAGTCTTGGCAGAC-AGACCGAT  1079

seq1: chr15_100980167_100981010
seq2: B6Ng01-164F14.g_68_911 (reverse)

seq1  GGAATTGAACTCAAGACCTTTAGAAGAGCAGTCCATGCCCTTAACTGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTGAACTCAAGACCTTTAGAAGAGCAGTCCATGCCCTTAACTGATG  50

seq1  AGCCATCTCTCCAGCCCAAGCAAAGGGTTTTAATCCTAGCGGAAATCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCTCTCCAGCCCAAGCAAAGGGTTTTAATCCTAGCGGAAATCTAG  100

seq1  GTGCCTGGTTAAGAACACTGGCGGCTCTTGCAGAGGAGGAGGGTTGGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTGGTTAAGAACACTGGCGGCTCTTGCAGAGGAGGAGGGTTGGTTC  150

seq1  CCAGCACCCACACCGGAGCTCACAACCGACTCCAGCCGAAGAAGATCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACCCACACCGGAGCTCACAACCGACTCCAGCCGAAGAAGATCTGA  200

seq1  TACTTTTTGTTTAGTTTGGTTTATTTTTTCCTTCCGGTGCGAAAGCATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTTGTTTAGTTTGGTTTATTTTTTCCTTCCGGTGCGAAAGCATAA  250

seq1  GTCACTGTTTCTCTTAGCATTGGTTGCTTTTATTTTGCAGTGCTGAAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTGTTTCTCTTAGCATTGGTTGCTTTTATTTTGCAGTGCTGAAGTG  300

seq1  AAGCCCGAGGCCTCAGACATGTTAGGCAATCTCTCTACAACTGAGCAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCGAGGCCTCAGACATGTTAGGCAATCTCTCTACAACTGAGCAAGA  350

seq1  GGCCTAAGCCCCGGGGTTATTTTTGGGAGATGTACACAGTCAGTACCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTAAGCCCCGGGGTTATTTTTGGGAGATGTACACAGTCAGTACCCAG  400

seq1  TTCTAAAACAGATTTGGCTGGTGTGGCGTCGGCTCCCCATCCTCGCGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAACAGATTTGGCTGGTGTGGCGTCGGCTCCCCATCCTCGCGGCT  450

seq1  CTTTGGTCTCTGGTCTGGGCTCTCAAGTCCCCAAAGGAAACCACGGGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTCTCTGGTCTGGGCTCTCAAGTCCCCAAAGGAAACCACGGGCAT  500

seq1  CAGTTTCTTACGTTGCTGTTCCTCTAGAACGGCTTTCTATTTGCACGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCTTACGTTGCTGTTCCTCTAGAACGGCTTTCTATTTGCACGAGT  550

seq1  AGATCTGAATGTGTATTTTTGCTCCACATCCTTCAAAATAATAAGCACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGAATGTGTATTTTTGCTCCACATCCTTCAAAATAATAAGCACAT  600

seq1  GGTACACAATATCCTGTACCTTACTCTACCCAGTTAATAATCTATCTTCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACACAATATCCTGTACCTTACTCTACCCAGTTAATAATCTATCTTCG  650

seq1  AGGGATTTATATATAGTGTAGATAACTTTCATTTTATTTTTAGTACAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTTATATATAGTGTAGATAACTTTCATTTTATTTTTAGTACAATG  700

seq1  TAGTATTCCATAGTTTGTCTCCGTTTGTTTGGAAGTTTTGATTATTTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTCCATAGTTTGTCTCCGTTTGTTTGGAAGTTTTGATTATTTCCA  750

seq1  AATTCTGGCCTTGTATCATGCTTAGCGAGTAAACCAGAACAAACATCAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGGCCTTGTATCATGCTTAGCGAGTAAACCAGAACAAACATCAGT  800

seq1  CTGCTCTCTTCCAGCGAATCTATACGTTCTGAGAAGTGGAATTC  844
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTCTTCCAGCGAATCTATACGTTCTGAGAAGTGGAATTC  844