BAC Information

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BAC

Clone NameB6Ng01-164I12
Chromosome15 (Build37)
Map Location 34,592,927 - 34,594,023
singlet/doubletsinglet
Overlap geneNpal2
Upstream geneTspyl5, LOC675463, Mtdh, Laptm4b, Matn2, Rpl30, BC030476, Hrsp12, Pop1
Downstream geneKcns2, Stk3, Osr2, Vps13b, EG666183
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164I12.bB6Ng01-164I12.g
ACCDH956831DH956832
length1,0761,095
definitionDH956831|Mus musculus domesticus DNA, BAC clone: B6Ng01-164I12, 5' end.DH956832|Mus musculus domesticus DNA, BAC clone: B6Ng01-164I12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgttcttgtggctatctatttttaggtttgttgaaggataactt
tcttgctttttctagggcataatttccctccttgtgttggagttttccct
ttaatatcctttgaagggctggattcatggaaagatatttgtgaatttgg
ttttatcatggaatactttggtttctccatctatggtaattgagagtttt
gctcggtatagtatcctgggctggcatttgtgttctcttatggtctgtat
aacatctgtccaggatcttctggctttcataatctctggtgagaagtctg
gtgtaattctgatagatctacctttatatgttacttgacattttcccctt
actgcttttaatattctgccttgatttagtgcatttgttgttctgattaa
tatgtgttagggggaatttcttttctggtccaatctatttggagttctat
aggcttcttatatgttcatgggcatctctttctttaggttaggaaagttt
tttttttttctataattttgttgaagatatttactgcccctttaagttga
aaaatcttcattctcatctatacctattatccttgggtttggtcttctca
ttgtgtcctggatttcttggatgttttgagttaggatctttttgcatttt
gcattttttttattgttgtgtccatgttttatagggaatcttttgcacct
gagattctctcttccatctcttgtattctgttgctgatgctaacatctat
ggttcctgatttctttcctagggtttctatctccagagttgtctctcttt
gggttttctttattctttctacttccatttttagatcctggatggttttg
ttcaattccatcacttctttgggttgtgttttctgtagttctttaaggga
ttttttgtgtttcctcttcaaggacttctaactgttaatgttctctgtat
tctttaagtgagttattatgcccttcttaattcctcttacagctcatgga
gatatattttaatctccaatcttgcttttgggtgtgttattggtgtaggg
ttgcacctggtatccatatcctctag
gaattctgggtaatttcctcaaatctgtcttctagtttacccgtagaagg
atctcaaagggagtggctattttaaaattaggtgggatatatatatatat
atatatatatcccagtttgcatgagggcaaacatttgttccagaattcag
atttgaacaactaagagagtcataactgtgtgataaaaacctgggtgcta
actttcattatcatactatactcaaaaacaggaaatacattggtaaaggc
gagtgtcagaaatagctctctggtaacactaaacataaatttatatatta
atatttttccaagatgattctctaacttaaatttattgcatcccaattaa
attcattcatacatacctaagaataggagaaacaatgtatcaattagttc
ccctaccactgtggcaacacctggcaagagggacttacaggaggaaggat
ttattttgcctctcagctcatcatgttggaggaggcatggaggataattc
caccatggtgtgtggcagagaaccagacagaactgaagcagataagggct
acccatcatggcctttatctccagccggactccacatctcaaaggtacta
caacatctccaaaaagtactactagttggaggctaccacacttggacctg
tggggtacatttcacaggtgaatcatcacgtaagtccccacagttgccac
agtttgatgctgaatgtttcccaaatgccatgtgttaaatgttttggtca
tcagaatggcaatattttgtggggtgctgttgaccttggaaggaggggcc
ttgtggaaaggccataggccactgagggaggctcccagaaaggattgcag
gggcctggtttcctccagcctccctctcttacttccttgctatggaggga
tgagttgctccaccactgccattaacactgtgccagaggtctaaaacatg
ggtttgcccaactagactggatttttctaagccatgagcaagaacagact
ttttcttttatagtaattacctctggtatttgttaagagttaaaaagctg
aacaacacctcttgttttagttttttgttttggttttgtgttttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_34592927_34594023
seq2: B6Ng01-164I12.g_67_1161

seq1  GAATTCTGGGTAATTTCCTCAAATCTGTCTTCTAGTTTACCCGTAGAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGTAATTTCCTCAAATCTGTCTTCTAGTTTACCCGTAGAAGG  50

seq1  ATCTCAAAGGGAGTGGCTATTTTAAAATTAGGTGGGATATATATATATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAAAGGGAGTGGCTATTTTAAAATTAGGTGGGATATATATATATAT  100

seq1  ATATATATATCCCAGTTTGCATGAGGGCAAACATTTGTTCCAGAATTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATCCCAGTTTGCATGAGGGCAAACATTTGTTCCAGAATTCAG  150

seq1  ATTTGAACAACTAAGAGAGTCATAACTGTGTGATAAAAACCTGGGTGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAACAACTAAGAGAGTCATAACTGTGTGATAAAAACCTGGGTGCTA  200

seq1  ACTTTCATTATCATACTATACTCAAAAACAGGAAATACATTGGTAAAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCATTATCATACTATACTCAAAAACAGGAAATACATTGGTAAAGGC  250

seq1  GAGTGTCAGAAATAGCTCTCTGGTAACACTAAACATAAATTTATATATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTCAGAAATAGCTCTCTGGTAACACTAAACATAAATTTATATATTA  300

seq1  ATATTTTTCCAAGATGATTCTCTAACTTAAATTTATTGCATCCCAATTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTCCAAGATGATTCTCTAACTTAAATTTATTGCATCCCAATTAA  350

seq1  ATTCATTCATACATACCTAAGAATAGGAGAAACAATGTATCAATTAGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTCATACATACCTAAGAATAGGAGAAACAATGTATCAATTAGTTC  400

seq1  CCCTACCACTGTGGCAACACCTGGCAAGAGGGACTTACAGGAGGAAGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACCACTGTGGCAACACCTGGCAAGAGGGACTTACAGGAGGAAGGAT  450

seq1  TTATTTTGCCTCTCAGCTCATCATGTTGGAGGAGGCATGGAGGATAATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGCCTCTCAGCTCATCATGTTGGAGGAGGCATGGAGGATAATTC  500

seq1  CACCATGGTGTGTGGCAGAGAACCAGACAGAACTGAAGCAGATAAGGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGGTGTGTGGCAGAGAACCAGACAGAACTGAAGCAGATAAGGGCT  550

seq1  ACCCATCATGGCCTTTATCTCCAGCCGGACTCCACATCTCAAAGGTACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATCATGGCCTTTATCTCCAGCCGGACTCCACATCTCAAAGGTACTA  600

seq1  CAACATCTCCAAAAAGTACTACTAGTTGGAGGCTACCACACTTGGACCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATCTCCAAAAAGTACTACTAGTTGGAGGCTACCACACTTGGACCTG  650

seq1  TGGGGTACATTTCACAGGTGAATCATCACGTAAGTCCCCACAGTTGCCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTACATTTCACAGGTGAATCATCACGTAAGTCCCCACAGTTGCCAC  700

seq1  AGTTTGATGCTGAATGTTTCCCAAATGCCATGTGTTAAATGTTTTGGTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGATGCTGAATGTTTCCCAAATGCCATGTGTTAAATGTTTTGGTCA  750

seq1  TCAGAATGGCAATA-TTTGTGGGGTGCTGTTGACCTTTGGAAGGAGGGGC  799
      |||||||||||||| |||||||||||||||||||| ||||||||||||||
seq2  TCAGAATGGCAATATTTTGTGGGGTGCTGTTGACC-TTGGAAGGAGGGGC  799

seq1  CTTGTGGAAAGGCCATAGGCCACTGAGGGAGGCTCCCAGAAAGGATTGCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGGAAAGGCCATAGGCCACTGAGGGAGGCTCCCAGAAAGGATTGCA  849

seq1  GGGGCCTGG-TTCCTCCAGCCTCCCTCTCTTACTTCCTTGCTATGGAGGG  898
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCTGGTTTCCTCCAGCCTCCCTCTCTTACTTCCTTGCTATGGAGGG  899

seq1  ATGAGTTTGCTCCACCACTGCCATTAACACTGTGCCAGAGGTCTAAAAAC  948
      ||||| ||||||||||||||||||||||||||||||||||||||||||  
seq2  ATGAG-TTGCTCCACCACTGCCATTAACACTGTGCCAGAGGTCTAAAA--  946

seq1  AATGGGTTTGCCCAACTAGACTGGA-TTTTCTACAGCCATGAGCAAGAAC  997
       |||||||||||||||||||||||| ||||||| ||||||||||||||||
seq2  CATGGGTTTGCCCAACTAGACTGGATTTTTCTA-AGCCATGAGCAAGAAC  995

seq1  AGACTTTTTCTTTTATAAGTTAATTACCTCTGGTATTTTGTTAAGAGTTA  1047
      |||||||||||||||||   ||||||||||||||| ||||||||||||||
seq2  AGACTTTTTCTTTTATA--GTAATTACCTCTGGTA-TTTGTTAAGAGTTA  1042

seq1  AAAAGCTGATCAACA-CTCATG-TTTAGTTTTTTGTTTTTGTTTT-TGTT  1094
      ||||||||| ||||| ||| || |||||||||||||||| ||||| ||||
seq2  AAAAGCTGAACAACACCTCTTGTTTTAGTTTTTTGTTTTGGTTTTGTGTT  1092

seq1  TTG  1097
      |||
seq2  TTG  1095