BAC Information

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BAC

Clone NameB6Ng01-165O14
Chromosome15 (Build37)
Map Location 94,370,942 - 94,509,267
singlet/doubletdoublet
Overlap genePus7l, Irak4, Twf1, Tmem117
Upstream genePrickle1, Zfp42-ps1, LOC100042627, LOC100042631, D630010B17Rik, Adamts20
Downstream geneLOC100043315, Nell2, Dbx2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165O14.bB6Ng01-165O14.g
ACCDH957841DH957842
length1,132162
definitionDH957841|Mus musculus domesticus DNA, BAC clone: B6Ng01-165O14, 5' end.DH957842|Mus musculus domesticus DNA, BAC clone: B6Ng01-165O14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,370,942 - 94,372,066)(94,509,106 - 94,509,267)
sequence
gaattccacatccttttgatgtcacaggcaaactgacccagcgatgtgtg
agttttctcatctaaaagtgaacgtaataaatcaacactttcttcttcac
atttagaagtcacactgttgacactgttttctttctcggagtcagactga
tggctccggtcaccatccgagcacccgggcaagtcagcagctccttcact
atttttatgttctaaggatacattctgaatatttaactttggcttcttga
cagaattgctcggttcagattgtattttactaatttcatagagagatcca
tcggtggccttactgactaactgtccctgttcatcgatctcgataacaat
gaagtcactgggtgaggtttttatgctgccctgaaagcccacgtgatcgt
tgatgaaacacaaggagttaaacctgatgccaccatctgtgtcctctgcc
atccttcacggtgcctacaagagagaccgcacactcagctaccagaaacg
cttgcagataagaagaatcaaagcggtctccaagatccactcagttctct
ccctctcaagtctatgctccctagaagacactaacttattttatggttcg
acttgcctacagcaagcagagttgacaggccaattttgtgacctaagtag
caatttgtatcttgatttcccatttactccaagctcctattatccagaat
ttaagatgggtcaatttggggttggagaaatgttgccttagcagaggacc
acaagtttcagttccccagcacccacatggcagctcacaagcatccctaa
actccatgtcctggcatctattgtccctttctgacctccaccacccacca
gcccccaggcacacccatgggtgctcattgatacatatacacaaagcacg
tatgataaaataaataagcctactaaaatgttaaacttgtcaggaggcgc
acacttttagtgccagcccttgggaagcataagcaggtggatctttgtga
gttcgaggccagcctggctacaaagcaagttcaaggaacagccatggcta
caccatagaaatactgtctcaaaagaaaacaaatgcacagcctacaccaa
gagaaattccgggtccaaaacctgttcctcaa
ctccttgggacagggcttgggatggagtttaagtctgggaagagttgaga
tctgtacattaattagcattttggtcattaacctcctactgtgctcacat
cctcggcagacctgaaggtaatggtggctcaaaatgtgtaaactgggggg
tgggggaggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_94370942_94372066
seq2: B6Ng01-165O14.b_42_1173

seq1  GAATTCCACATCCTTTTGATGTCACAGGCAAACTGACCCAGCGATGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACATCCTTTTGATGTCACAGGCAAACTGACCCAGCGATGTGTG  50

seq1  AGTTTTCTCATCTAAAAGTGAACGTAATAAATCAACACTTTCTTCTTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCTCATCTAAAAGTGAACGTAATAAATCAACACTTTCTTCTTCAC  100

seq1  ATTTAGAAGTCACACTGTTGACACTGTTTTCTTTCTCGGAGTCAGACTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAAGTCACACTGTTGACACTGTTTTCTTTCTCGGAGTCAGACTGA  150

seq1  TGGCTCCGGTCACCATCCGAGCACCCGGGCAAGTCAGCAGCTCCTTCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCCGGTCACCATCCGAGCACCCGGGCAAGTCAGCAGCTCCTTCACT  200

seq1  ATTTTTATGTTCTAAGGATACATTCTGAATATTTAACTTTGGCTTCTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATGTTCTAAGGATACATTCTGAATATTTAACTTTGGCTTCTTGA  250

seq1  CAGAATTGCTCGGTTCAGATTGTATTTTACTAATTTCATAGAGAGATCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTGCTCGGTTCAGATTGTATTTTACTAATTTCATAGAGAGATCCA  300

seq1  TCGGTGGCCTTACTGACTAACTGTCCCTGTTCATCGATCTCGATAACAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTGGCCTTACTGACTAACTGTCCCTGTTCATCGATCTCGATAACAAT  350

seq1  GAAGTCACTGGGTGAGGTTTTTATGCTGCCCTGAAAGCCCACGTGATCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCACTGGGTGAGGTTTTTATGCTGCCCTGAAAGCCCACGTGATCGT  400

seq1  TGATGAAACACAAGGAGTTAAACCTGATGCCACCATCTGTGTCCTCTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAAACACAAGGAGTTAAACCTGATGCCACCATCTGTGTCCTCTGCC  450

seq1  ATCCTTCACGGTGCCTACAAGAGAGACCGCACACTCAGCTACCAGAAACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTCACGGTGCCTACAAGAGAGACCGCACACTCAGCTACCAGAAACG  500

seq1  CTTGCAGATAAGAAGAATCAAAGCGGTCTCCAAGATCCACTCAGTTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGATAAGAAGAATCAAAGCGGTCTCCAAGATCCACTCAGTTCTCT  550

seq1  CCCTCTCAAGTCTATGCTCCCTAGAAGACACTAACTTATTTTATGGTTCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTCAAGTCTATGCTCCCTAGAAGACACTAACTTATTTTATGGTTCG  600

seq1  ACTTGCCTACAGCAAGCAGAGTTGACAGGCCAATTTTGTGACCTAAGTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCCTACAGCAAGCAGAGTTGACAGGCCAATTTTGTGACCTAAGTAG  650

seq1  CAATTTGTATCTTGATTTCCCATTCACTCCAAGCTCCTATTATCCAGAA-  699
      |||||||||||||||||||||||| |||||||||||||||||||||||| 
seq2  CAATTTGTATCTTGATTTCCCATTTACTCCAAGCTCCTATTATCCAGAAT  700

seq1  TTAAGATGGGTCAATTTGGGGTTGGAGAAATGTTGCCTTAGCAGAGGACC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATGGGTCAATTTGGGGTTGGAGAAATGTTGCCTTAGCAGAGGACC  750

seq1  ACAAG-TTCAGTTCCCCAGCACCCACATGGCAGCTCACAAGCATCCCT-A  797
      ||||| |||||||||||||||||||||||||||||||||||||||||| |
seq2  ACAAGTTTCAGTTCCCCAGCACCCACATGGCAGCTCACAAGCATCCCTAA  800

seq1  ACTCCATGTCCTGGCATCTATTGTCCCTTTCTGACCTCCACCACCCACCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCATGTCCTGGCATCTATTGTCCCTTTCTGACCTCCACCACCCACCA  850

seq1  GCCCCCAGGCACACCCAT-GGTGCTCATTGATACATATACACAAAGCACG  896
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GCCCCCAGGCACACCCATGGGTGCTCATTGATACATATACACAAAGCACG  900

seq1  TATGATAAAATAAATAAGCCTACTAAAAATGTTTAAACTTGTCAGGAGGC  946
      |||||||||||||||||||||||| |||||| ||||||||||||||||||
seq2  TATGATAAAATAAATAAGCCTACT-AAAATG-TTAAACTTGTCAGGAGGC  948

seq1  GCACACTTTTAGTGCCAGCCCTTGGGAAGCATAAGCAGGTGGATCTTTGT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACTTTTAGTGCCAGCCCTTGGGAAGCATAAGCAGGTGGATCTTTGT  998

seq1  GAGTTCGAGGCCAGCCTGGTCTACAAAGCAAGTTCCAGG-ACAGCCATGG  1045
      ||||||||||||||||||| ||||||||||||||| ||| ||||||||||
seq2  GAGTTCGAGGCCAGCCTGG-CTACAAAGCAAGTTCAAGGAACAGCCATGG  1047

seq1  CTACA-CATAGAAATACTGTCTCAAAAAGAAACAAAATGCACAG-CTACA  1093
      ||||| ||||||||||||||||| ||||||||  |||||||||| |||||
seq2  CTACACCATAGAAATACTGTCTC-AAAAGAAAACAAATGCACAGCCTACA  1096

seq1  C--AGAGAAATCCTGTGTCAAAAACCTGT--CTCAA  1125
      |  |||||||| | | ||| |||||||||  |||||
seq2  CCAAGAGAAATTCCGGGTCCAAAACCTGTTCCTCAA  1132

seq1: chr15_94509106_94509267
seq2: B6Ng01-165O14.g_75_236 (reverse)

seq1  CCCCCTCCCCCACCCCCCAGTTTACACATTTTGAGCCACCATTACCTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCCCCCACCCCCCAGTTTACACATTTTGAGCCACCATTACCTTCA  50

seq1  GGTCTGCCGAGGATGTGAGCACAGTAGGAGGTTAATGACCAAAATGCTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGCCGAGGATGTGAGCACAGTAGGAGGTTAATGACCAAAATGCTAA  100

seq1  TTAATGTACAGATCTCAACTCTTCCCAGACTTAAACTCCATCCCAAGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTACAGATCTCAACTCTTCCCAGACTTAAACTCCATCCCAAGCCC  150

seq1  TGTCCCAAGGAG  162
      ||||||||||||
seq2  TGTCCCAAGGAG  162