BAC Information

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BAC

Clone NameB6Ng01-166G16
Chromosome15 (Build37)
Map Location 6,884,348 - 7,017,145
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039358, LOC666323, Dab2, C9, LOC100039396, LOC100039412, Fyb, LOC100039453, EG665511, 4921505C17Rik, Osmr
Downstream geneLifr, Egflam, Gdnf, Wdr70, LOC665556, LOC621001
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166G16.bB6Ng01-166G16.g
ACCDH958206DH958207
length1,085884
definitionDH958206|Mus musculus domesticus DNA, BAC clone: B6Ng01-166G16, 5' end.DH958207|Mus musculus domesticus DNA, BAC clone: B6Ng01-166G16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,884,348 - 6,885,434)(7,016,263 - 7,017,145)
sequence
gaattctctttcttacatcttgtgaaccttacttttaccaactacagtcc
acagtggggcggcggcgatgggggggagggcttgggggggaacccgtcat
gagcatcattctcctataatctgtgagaaaacagctcaattgcaccacaa
ttgattaccagcccaacctcacatcttaccgaattttccagctggacgga
caacaagcctcatgaggttaagcgaagtaaccctaggttagcacagtgag
tcaatctctcagctatgctgtaaaatacaagcctattccaggtctatcgc
tttttttccgccaggcagcagaccacatggtcccccttctgcaacagaat
cagtgtgtctgcagagaaaaggaattaagctattagcaagtggtttctga
cttgcgggagcaccagcaacaatagccacttccccataaagttttaagag
agctgcttgctttggcagggcttcactctattacacattcctgccactta
attttccttgcaaagataaacagtggccttctgaagcagagcagaggagc
tgtagaacagccaaccaaatgtttgtggagtggggaggactatggggttg
ctccatgtatatatagctgggctctgaaatggttcaagcctgttcacaga
gccagccatttcctgaacttctgtgcacttactgccttctttccagaaag
aattaaaagaattttaaaaaaaattcttgattttcttattattgaactgt
tcttttgaccttcagagttgtttggcaaatgcaaatctaataaatagcac
aaaatttatatttttcatggtttccttaaatataacatatacccattatc
atgatgctgataaaggtagttgtcttggttagggttttcatgctgtgaac
agacaccatgaccaagacagctctagttataaaggacaacatttaactgg
gctggattacaggttcagaggtccagtccattatcatcaaggcagacatg
gcagcatcatggtagacatgaagttggagaattgagagttctcatctcat
ctaaggcggtcaggagaatgacctggcttccagac

gaattcactctgtagaccaggctggccttgaattcagaaatccacctgcc
tctgcctcccaagtgctgggattaaaggagtgcgccaccactgcctggca
gaagaaatcttaaaacctcaatgactaaaaaagttagcaggagagatgtg
atccagaacaaagaccttgggtttctatttactgattaaccatcctccgc
tcttccttgaagtaacagctcactgactatgttagccagcagtcaccact
aaacccgtgttcctctgcattggtacagacagtttcagaattgatagctt
tttctattcccacagcttatacaaatgtttatgtctaaagtgaaccttag
tcccctctgtcttctgagagcaatacaactctcctcaaacattttacaat
gaacaaactctcatccaccgggcagaaaacagaacacggaagagtcatta
cgcagatgaaatggccaagaaccgaaaagcttgcacacatgaagacacat
gggtggcagtttgacaggagaaacagaaacctgaacttcacatataccaa
agcagtgatgcaaacaggctttctgtatcttccagtgcctgacccgtgga
aagatcgctagaatctttatcccaccgctcttagcatttgaaagagggtc
aaacaactccaaaacgatagaaacagcaaagtacttaaccacaccatatc
gactagatgtagatagaagtttccaggaaggggaatcagtggggtctggt
aatgccgagaaggtctttgtgaagacaggaggttagaccaggtggtggaa
gataagttgaggtttcagtaggaagtgggataaaagggaaacattgggaa
atggcaatctgttggtttgggggaagtggagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_6884348_6885434
seq2: B6Ng01-166G16.b_43_1127

seq1  GAATTCTCTTTCTTACATCTTGTGAACCTTACTTTTACCAACTACAGTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTCTTACATCTTGTGAACCTTACTTTTACCAACTACAGTCC  50

seq1  ACAGTGGGGCGGCGGCGATGGGGGGGAGGGCTTGGGGGGGAACCCGTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGGGCGGCGGCGATGGGGGGGAGGGCTTGGGGGGGAACCCGTCAT  100

seq1  GAGCATCATTCTCCTATAATCTGTGAGAAAACAGCTCAATTGCACCACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATCATTCTCCTATAATCTGTGAGAAAACAGCTCAATTGCACCACAA  150

seq1  TTGATTACCAGCCCAACCTCACATCTTACCGAATTTTCCAGCTGGACGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTACCAGCCCAACCTCACATCTTACCGAATTTTCCAGCTGGACGGA  200

seq1  CAACAAGCCTCATGAGGTTAAGCGAAGTAACCCTAGGTTAGCACAGTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAGCCTCATGAGGTTAAGCGAAGTAACCCTAGGTTAGCACAGTGAG  250

seq1  TCAATCTCTCAGCTATGCTGTAAAATACAAGCCTATTCCAGGTCTATCGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCTCTCAGCTATGCTGTAAAATACAAGCCTATTCCAGGTCTATCGC  300

seq1  TTTTTTTCCGCCAGGCAGCAGACCACATGGTCCCCCTTCTGCAACAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCCGCCAGGCAGCAGACCACATGGTCCCCCTTCTGCAACAGAAT  350

seq1  CAGTGTGTCTGCAGAGAAAAGGAATTAAGCTATTAGCAAGTGGTTTCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGTCTGCAGAGAAAAGGAATTAAGCTATTAGCAAGTGGTTTCTGA  400

seq1  CTTGCGGGAGCACCAGCAACAATAGCCACTTCCCCATAAAGTTTTAAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCGGGAGCACCAGCAACAATAGCCACTTCCCCATAAAGTTTTAAGAG  450

seq1  AGCTGCTTGCTTTGGCAGGGCTTCACTCTATTACACATTCCTGCCACTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTTGCTTTGGCAGGGCTTCACTCTATTACACATTCCTGCCACTTA  500

seq1  ATTTTCCTTGCAAAGATAAACAGTGGCCTTCTGAAGCAGAGCAGAGGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTTGCAAAGATAAACAGTGGCCTTCTGAAGCAGAGCAGAGGAGC  550

seq1  TGTAGAACAGCCAACCAAATGTTTGTGGAGTGGGGAGGACTATGGGGTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAACAGCCAACCAAATGTTTGTGGAGTGGGGAGGACTATGGGGTTG  600

seq1  CTCCATGTATATATAGCTGGGCTCTGAAATGGTTCAAGCCTGTTCACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGTATATATAGCTGGGCTCTGAAATGGTTCAAGCCTGTTCACAGA  650

seq1  GCCAGCCATTTCCTGAACTTCTGTGCACTTACTGCCTTCTTTCCAGAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCATTTCCTGAACTTCTGTGCACTTACTGCCTTCTTTCCAGAAAG  700

seq1  AATTAAAAGAATTTTAAAAAAAATTCTTGATTTTCTTATTATTGAACTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAAGAATTTTAAAAAAAATTCTTGATTTTCTTATTATTGAACTGT  750

seq1  TCTTTTGACCTTCAGAGTTGTTTGGCAAATGCAAATCTAATAAATAGCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGACCTTCAGAGTTGTTTGGCAAATGCAAATCTAATAAATAGCAC  800

seq1  AAAATTTATA-TTTTCATGGTTTCCTTAAATATAACATATA-CCATTATC  848
      |||||||||| |||||||||||||||||||||||||||||| ||||||||
seq2  AAAATTTATATTTTTCATGGTTTCCTTAAATATAACATATACCCATTATC  850

seq1  ATGATGCTGATAAAGGTAGTTGTCTTGGTTAGGGTTTTCATGCTGTGAAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGCTGATAAAGGTAGTTGTCTTGGTTAGGGTTTTCATGCTGTGAAC  900

seq1  AGACACCATGACCAAGACAGCTCTAGTTATAAAGGACAACATTTAACTGG  948
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGACACCATGACCAAGACAGCTCTAGTTATAAAGGACAACATTTAACT-G  949

seq1  GGCTGGATTACAGGTTCAGAGGTCCAGTCCATTATCATCAAGGCAAGAAC  998
      |||||||||||||||||||||||||||||||||||||||||||||   ||
seq2  GGCTGGATTACAGGTTCAGAGGTCCAGTCCATTATCATCAAGGCA--GAC  997

seq1  ATGGCAGCATCATGGTAGACATGAGGTTGGAAGAGTTGAGAGTTCTCATC  1048
      |||||||||||||||||||||||| ||||| ||| |||||||||||||||
seq2  ATGGCAGCATCATGGTAGACATGAAGTTGG-AGAATTGAGAGTTCTCATC  1046

seq1  TTCATCTAAAGGCGGTCAGGAGAA-GA-CTGGCTTCCAGAC  1087
       |||||| |||||||||||||||| || |||||||||||||
seq2  -TCATCT-AAGGCGGTCAGGAGAATGACCTGGCTTCCAGAC  1085


seq1: chr15_7016263_7017145
seq2: B6Ng01-166G16.g_65_948 (reverse)

seq1  CCTCTCCACTTCCCCC-AACCAACAGATTGCCATTTCCCAATGTTTCCCT  49
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCTCTCCACTTCCCCCAAACCAACAGATTGCCATTTCCCAATGTTTCCCT  50

seq1  TTTATCCCACTTCCTACTGAAACCTCAACTTATCTTCCACCACCTGGTCT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCCACTTCCTACTGAAACCTCAACTTATCTTCCACCACCTGGTCT  100

seq1  AACCTCCTGTCTTCACAAAGACCTTCTCGGCATTACCAGACCCCACTGAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCCTGTCTTCACAAAGACCTTCTCGGCATTACCAGACCCCACTGAT  150

seq1  TCCCCTTCCTGGAAACTTCTATCTACATCTAGTCGATATGGTGTGGTTAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTCCTGGAAACTTCTATCTACATCTAGTCGATATGGTGTGGTTAA  200

seq1  GTACTTTGCTGTTTCTATCGTTTTGGAGTTGTTTGACCCTCTTTCAAATG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTGCTGTTTCTATCGTTTTGGAGTTGTTTGACCCTCTTTCAAATG  250

seq1  CTAAGAGCGGTGGGATAAAGATTCTAGCGATCTTTCCACGGGTCAGGCAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAGCGGTGGGATAAAGATTCTAGCGATCTTTCCACGGGTCAGGCAC  300

seq1  TGGAAGATACAGAAAGCCTGTTTGCATCACTGCTTTGGTATATGTGAAGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGATACAGAAAGCCTGTTTGCATCACTGCTTTGGTATATGTGAAGT  350

seq1  TCAGGTTTCTGTTTCTCCTGTCAAACTGCCACCCATGTGTCTTCATGTGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTTTCTGTTTCTCCTGTCAAACTGCCACCCATGTGTCTTCATGTGT  400

seq1  GCAAGCTTTTCGGTTCTTGGCCATTTCATCTGCGTAATGACTCTTCCGTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCTTTTCGGTTCTTGGCCATTTCATCTGCGTAATGACTCTTCCGTG  450

seq1  TTCTGTTTTCTGCCCGGTGGATGAGAGTTTGTTCATTGTAAAATGTTTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTTCTGCCCGGTGGATGAGAGTTTGTTCATTGTAAAATGTTTGA  500

seq1  GGAGAGTTGTATTGCTCTCAGAAGACAGAGGGGACTAAGGTTCACTTTAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGTTGTATTGCTCTCAGAAGACAGAGGGGACTAAGGTTCACTTTAG  550

seq1  ACATAAACATTTGTATAAGCTGTGGGAATAGAAAAAGCTATCAATTCTGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAACATTTGTATAAGCTGTGGGAATAGAAAAAGCTATCAATTCTGA  600

seq1  AACTGTCTGTACCAATGCAGAGGAACACGGGTTTAGTGGTGACTGCTGGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTCTGTACCAATGCAGAGGAACACGGGTTTAGTGGTGACTGCTGGC  650

seq1  TAACATAGTCAGTGAGCTGTTACTTCAAGGAAGAGCGGAGGATGGTTAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATAGTCAGTGAGCTGTTACTTCAAGGAAGAGCGGAGGATGGTTAAT  700

seq1  CAGTAAATAGAAACCCAAGGTCTTTGTTCTGGATCACATCTCTCCTGCTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAATAGAAACCCAAGGTCTTTGTTCTGGATCACATCTCTCCTGCTA  750

seq1  ACTTTTTTAGTCATTGAGGTTTTAAGATTTCTTCTGCCAGGCAGTGGTGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTTAGTCATTGAGGTTTTAAGATTTCTTCTGCCAGGCAGTGGTGG  800

seq1  CGCACTCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACTCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTG  850

seq1  AATTCAAGGCCAGCCTGGTCTACAGAGTGAATTC  883
      ||||||||||||||||||||||||||||||||||
seq2  AATTCAAGGCCAGCCTGGTCTACAGAGTGAATTC  884


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