BAC Information

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BAC

Clone NameB6Ng01-166I05
Chromosome15 (Build37)
Map Location 42,599,503 - 42,600,434
singlet/doubletsinglet
Overlap genenone
Upstream geneOxr1, Abra, EG432946, LOC432947, LOC100039268, LOC100039197, Angpt1
Downstream geneRspo2, LOC675960, Eif3s6, Ttc35
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166I05.bB6Ng01-166I05.g
ACCDH958274DH958275
length9281,156
definitionDH958274|Mus musculus domesticus DNA, BAC clone: B6Ng01-166I05, 5' end.DH958275|Mus musculus domesticus DNA, BAC clone: B6Ng01-166I05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattaaattatgttctgtctgtacttcagcttgtaagaacaatt
atactaaacaaatgtacactggaaatcaaggataactttttttttatcag
cttttcttatctcagtctaagtcaggtcctccaacgtttgaaaagctttg
atgctttgacatgatgtttgccaaagaggggtctataatgagcagccaaa
ttctctgtatttcaggcactttctttacactccctttgaaggagactgtc
aagtgtgtcgcatgctgtttgtcagttaacacttggggagagaaattcac
aaagggcactttatgtaccttcacaacaaggatatctttgccaacacttc
agagctattttgagtttgggagttgtaagtatctcggtttttttaaggtg
atagtagctgacctaggatgcctgggtcttaagtgagtttgtactttcaa
gaccttttgacacttgcctgtgccttcaattgtgtgtcagatgacttgtg
tcttttatttatgtggttatcttcatttgatgagccttataataatgaca
atgattataaaaatcaataaactgtatgtgttattttctaattatacagc
attatgatcttgttgaatgaacattagaatctggaagtaagtatgattat
tagttctgtgtataatgagaacatagagctcagaaagttaaataaaacag
ctataggaacagtacacaagaggagaaattaaatcttcactgggaattgg
atgagttcagcactctctgtttgtttgtcaggacttttagaagaccgcag
tgccaaaggaagtaggggttaggagtttatgtggtgggcagggtggacgt
ataagtagggaagagcttgcaaaaaagcatctaatgccaattgatgtttt
cttagcatatcctagctcatggtgtgtg
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctgcggttcctcag
aaaactggacatagtactaccggaggatccagcaatacctctcctgggca
tatatccagaagatgccccaacaggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacctagatg
cccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctagccaaa
tggatggacctggagggcatcatcctgagtgaggtaacacattcacaaag
aaactcacacaatatgtattcactgataagtggatattagccccaaacct
aggatacccaagatataagatataatttgctaaacacatgaaactcaagg
agaatgaagactgaagtgtggacactatgcccctccttagatttgggaac
aaaacacccatggaaggagttacagagacggagtttggagctgagatgaa
aggatggaccatgtagagactgccatagccagggatccaccccataatca
gcatccaaacgctgacaccattgcatacactagcaagattttattgaaag
gacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcatagggctcccaa
tggagagctagagaagtagccaggagctaaagggatctgcaccctatagg
tggaacacatatgagctaaccagtacccggagctctgacttctagctgca
tatatatcaaagatgctagtcgcatcactggtaagaagagcccatgactt
gcaacttaattgccagtacaggcataccaggccaaaaaggggattggatg
tgcaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_42599503_42600434
seq2: B6Ng01-166I05.b_47_974 (reverse)

seq1  CACACACCATGAGCCTAGGATATGCTAAGAAAACATCAATTTGGCACTTA  50
      ||||||||||||| ||||||||||||||||||||||||| |||||| |||
seq2  CACACACCATGAG-CTAGGATATGCTAAGAAAACATCAA-TTGGCA-TTA  47

seq1  GATGCTTTTTTGCAAGCTCTTCCCTACTTATACGTCCACCCTGCCCACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTTTTTTGCAAGCTCTTCCCTACTTATACGTCCACCCTGCCCACCA  97

seq1  CATAAACTCCTAACCCCTACTTCCTTTGGCACCTGCGGTCTTCTAAAAGT  150
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CATAAACTCCTAACCCCTACTTCCTTTGGCA-CTGCGGTCTTCTAAAAGT  146

seq1  CCTGACAAACAAACAGAGAGTGCTGAACTCATCCAATTCCCAGTGAAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACAAACAAACAGAGAGTGCTGAACTCATCCAATTCCCAGTGAAGAT  196

seq1  TTAATTTCTCCTCTTGTGTACTGTTCCTATAGCTGTTTTATTTAACTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTCTCCTCTTGTGTACTGTTCCTATAGCTGTTTTATTTAACTTTC  246

seq1  TGAGCTCTATGTTCTCATTATACACAGAACTAATAATCATACTTACTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCTATGTTCTCATTATACACAGAACTAATAATCATACTTACTTCC  296

seq1  AGATTCTAATGTTCATTCAACAAGATCATAATGCTGTATAATTAGAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCTAATGTTCATTCAACAAGATCATAATGCTGTATAATTAGAAAAT  346

seq1  AACACATACAGTTTATTGATTTTTATAATCATTGTCATTATTATAAGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATACAGTTTATTGATTTTTATAATCATTGTCATTATTATAAGGCT  396

seq1  CATCAAATGAAGATAACCACATAAATAAAAGACACAAGTCATCTGACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAATGAAGATAACCACATAAATAAAAGACACAAGTCATCTGACACA  446

seq1  CAATTGAAGGCACAGGCAAGTGTCAAAAGGTCTTGAAAGTACAAACTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGAAGGCACAGGCAAGTGTCAAAAGGTCTTGAAAGTACAAACTCAC  496

seq1  TTAAGACCCAGGCATCCTAGGTCAGCTACTATCACCTTAAAAAAACCGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGACCCAGGCATCCTAGGTCAGCTACTATCACCTTAAAAAAACCGAG  546

seq1  ATACTTACAACTCCCAAACTCAAAATAGCTCTGAAGTGTTGGCAAAGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTACAACTCCCAAACTCAAAATAGCTCTGAAGTGTTGGCAAAGATA  596

seq1  TCCTTGTTGTGAAGGTACATAAAGTGCCCTTTGTGAATTTCTCTCCCCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTTGTGAAGGTACATAAAGTGCCCTTTGTGAATTTCTCTCCCCAA  646

seq1  GTGTTAACTGACAAACAGCATGCGACACACTTGACAGTCTCCTTCAAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAACTGACAAACAGCATGCGACACACTTGACAGTCTCCTTCAAAGG  696

seq1  GAGTGTAAAGAAAGTGCCTGAAATACAGAGAATTTGGCTGCTCATTATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTAAAGAAAGTGCCTGAAATACAGAGAATTTGGCTGCTCATTATAG  746

seq1  ACCCCTCTTTGGCAAACATCATGTCAAAGCATCAAAGCTTTTCAAACGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTCTTTGGCAAACATCATGTCAAAGCATCAAAGCTTTTCAAACGTT  796

seq1  GGAGGACCTGACTTAGACTGAGATAAGAAAAGCTGATAAAAAAAAAGTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGACCTGACTTAGACTGAGATAAGAAAAGCTGATAAAAAAAAAGTTA  846

seq1  TCCTTGATTTCCAGTGTACATTTGTTTAGTATAATTGTTCTTACAAGCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGATTTCCAGTGTACATTTGTTTAGTATAATTGTTCTTACAAGCTG  896

seq1  AAGTACAGACAGAACATAATTTAATTGAATTC  932
      ||||||||||||||||||||||||||||||||
seq2  AAGTACAGACAGAACATAATTTAATTGAATTC  928