BAC Information

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BAC

Clone NameB6Ng01-166O13
Chromosome15 (Build37)
Map Location 37,215,175 - 37,349,218
singlet/doubletdoublet
Overlap geneGrhl2, Ncald
Upstream geneLOC670773, EG268795, EG545101, Ankrd46, 4631426E05Rik, Pabpc1, LOC626746, Ywhaz, Zfp706, LOC670911, LOC667492, LOC100041288
Downstream geneLOC667498, 4930447A16Rik, LOC100041313, LOC667534, Rrm2b, LOC100041478, Edd1, Odf1, LOC382986, LOC667563, Klf10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166O13.bB6Ng01-166O13.g
ACCDH958550DH958551
length4681,044
definitionDH958550|Mus musculus domesticus DNA, BAC clone: B6Ng01-166O13, 5' end.DH958551|Mus musculus domesticus DNA, BAC clone: B6Ng01-166O13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,215,175 - 37,215,648)(37,348,177 - 37,349,218)
sequence
tttatctatttcatgtatgtgagtacactgttcctgtcttcagacatacc
ataagggggcatcagatcccatccagatggttgtgagtcaccatgtggtt
gctgggaattgaacttaggagctttagaaggagttgctgagtcatctctc
tagatgccccctcccccattttttcctttttttttttttttttttttttt
gagggcaagaatcttacttatgagcttaatttctatgtttcttttagtgc
caaacagatggtaaggccctaaaaaactctcactgaagggttttcaaact
gactaattgcaaaaaaaacacacaccaatacatttgattttctgtcagta
ttactcaatcagctgatatttgtatggggtgcatggggtcctgtggctgg
gtaaactttgaggaaagaccgtcttcttggatctgaggaataagaccaga
ttagaagaattttgaagg
gaattctgtgttttccagcagagaccaaaatccacactggatgaggttcc
ctttctgagctttggctgcttggttgtaacacgagataactagttcagag
actagttagctaagggaggttagctgagaggggggtgtgaagatatgtgg
tagtcacaaaggattacaatagatgcttggttttcaagcgtttctttata
tgtgccacggtgctccatagggatcgaagtgggaacttagagtcccctga
gactggagtccaactctctgtccccaattcataatctctgcccaatcttg
aagaaatgatgtgatttccctaagcctcggtgcccttgtctgcggagtga
ggcgagctattctttccttgtgaggttgttatggggatcaaatgacatgt
tgtacaggaaacagtgagcaggtgccaggaccgtgaacggtggtgaagtg
aaagtgacaggcttggtgactgtggtaagagcagctaatgatgtaagact
aggcccatcaacttccctctgctcagtccctctcctgctcctgcagagtc
ccttctcctgagccaccctcctgtccacttccttttgtgtgacccactgg
aactcattggggttatgtacataagcagggagactatttactagattatg
agcagcttgtcattgtctacaccactaaagatgacactctccccactgag
cagccattaactgctaatagctcttcagggagcagagaggcctcgggagc
tctgccccatcacgaatagactgttgatggggcctggctttttgtagtgt
aggttctggggcttaaactcacatccttaagcttgtaaggcaagtatttt
aatgacaaagccatctcccagccccttatgttatatttttaaagaaatct
tgcagagtttgtatgaaactgcgagttaaaaaacagaaagcatcggccgt
ttctccttacctacctagtctcagctaccaggtttaatgctccccactgt
tcgaacttcttggggcccgtggaagtcctaggctttgtgtattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_37215175_37215648
seq2: B6Ng01-166O13.b_48_521

seq1  GAATTCTTTATCTATTTCATGTATGTGAGTACACTGTTCCTGTCTTCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATCTATTTCATGTATGTGAGTACACTGTTCCTGTCTTCAGA  50

seq1  CATACCATAAGGGGGCATCAGATCCCATCCAGATGGTTGTGAGTCACCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCATAAGGGGGCATCAGATCCCATCCAGATGGTTGTGAGTCACCAT  100

seq1  GTGGTTGCTGGGAATTGAACTTAGGAGCTTTAGAAGGAGTTGCTGAGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTGCTGGGAATTGAACTTAGGAGCTTTAGAAGGAGTTGCTGAGTCA  150

seq1  TCTCTCTAGATGCCCCCTCCCCCATTTTTTCCTTTTTTTTTTTTTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTAGATGCCCCCTCCCCCATTTTTTCCTTTTTTTTTTTTTTTTTT  200

seq1  TTTTTTGAGGGCAAGAATCTTACTTATGAGCTTAATTTCTATGTTTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGAGGGCAAGAATCTTACTTATGAGCTTAATTTCTATGTTTCTTT  250

seq1  TAGTGCCAAACAGATGGTAAGGCCCTAGAAAACTCTCACTGAAGGGTTTT  300
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TAGTGCCAAACAGATGGTAAGGCCCTAAAAAACTCTCACTGAAGGGTTTT  300

seq1  CAGACTGACTAATTGCAAAAGAGACACACACCAATACATTTGATTTTCTG  350
      || ||||||||||||||||| | |||||||||||||||||||||||||||
seq2  CAAACTGACTAATTGCAAAAAAAACACACACCAATACATTTGATTTTCTG  350

seq1  TCAGTATTACTCAATCAGCTGATATTTGTATGGTGTGCATGGGGTCCTGT  400
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCAGTATTACTCAATCAGCTGATATTTGTATGGGGTGCATGGGGTCCTGT  400

seq1  GGCTGGGTAAACTTTGAGGAAAGACCGTCTTCTTGGATCTGAGGAATAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGGTAAACTTTGAGGAAAGACCGTCTTCTTGGATCTGAGGAATAAG  450

seq1  ACCAGATAAGAAGAATTGTGAAGG  474
      ||||||| ||||||||| ||||||
seq2  ACCAGATTAGAAGAATTTTGAAGG  474

seq1: chr15_37348177_37349218
seq2: B6Ng01-166O13.g_70_1113 (reverse)

seq1  AAATACAC-AAGCCTA-GACTTCCACGGG-CCCAAGAAGTTTCGACAGTG  47
      |||||||| ||||||| |||||||||||| |||||||||||   ||||||
seq2  AAATACACAAAGCCTAGGACTTCCACGGGCCCCAAGAAGTTCGAACAGTG  50

seq1  TGGAGCATTAAACCTGGTAGCTGAGACTAGGTAGGTAAGGAGAGACGGCC  97
       |||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GGGAGCATTAAACCTGGTAGCTGAGACTAGGTAGGTAAGGAGAAACGGCC  100

seq1  GATGCTTTCTGTTTTTTAACTCGCAGTTTCATACAAACTCTGCAAGGATT  147
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GATGCTTTCTGTTTTTTAACTCGCAGTTTCATACAAACTCTGCAA-GATT  149

seq1  TCTTTGAAAATATAACATTAGGGGCTGGGAGATGGCTTTGTCATTAAAGT  197
      ||||| |||||||||||| ||||||||||||||||||||||||||||| |
seq2  TCTTTAAAAATATAACATAAGGGGCTGGGAGATGGCTTTGTCATTAAAAT  199

seq1  ACTTGCCTTACAAGCTTAAGGATGTGAGTTTAAGCCCCAGAACCTACACT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCCTTACAAGCTTAAGGATGTGAGTTTAAGCCCCAGAACCTACACT  249

seq1  ACAAAAAGCCAGGCCCCATCAACAGTCTATTCGTGATGGGGCAGAGCTCC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAGCCAGGCCCCATCAACAGTCTATTCGTGATGGGGCAGAGCTCC  299

seq1  CGAGGCCTCTCTGCTCCCTGAAGAGCTATTAGCAGTTAATGGCTGCTCAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGCCTCTCTGCTCCCTGAAGAGCTATTAGCAGTTAATGGCTGCTCAG  349

seq1  TGGGGAGAGTGTCATCTTTAGTGGTGTAGACAATGACAAGCTGCTCATAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGAGTGTCATCTTTAGTGGTGTAGACAATGACAAGCTGCTCATAA  399

seq1  TCTAGTAAATAGTCTCCCTGCTTATGTACATAACCCCAATGAGTTCCAGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTAAATAGTCTCCCTGCTTATGTACATAACCCCAATGAGTTCCAGT  449

seq1  GGGTCACACAAAAGGAAGTGGACAGGAGGGTGGCTCAGGAGAAGGGACTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCACACAAAAGGAAGTGGACAGGAGGGTGGCTCAGGAGAAGGGACTC  499

seq1  TGCAGGAGCAGGAGAGGGACTGAGCAGAGGGAAGTTGATGGGCCTAGTCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGAGCAGGAGAGGGACTGAGCAGAGGGAAGTTGATGGGCCTAGTCT  549

seq1  TACATCATTAGCTGCTCTTACCACAGTCACCAAGCCTGTCACTTTCACTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCATTAGCTGCTCTTACCACAGTCACCAAGCCTGTCACTTTCACTT  599

seq1  CACCACCGTTCACGGTCCTGGCACCTGCTCACTGTTTCCTGTACAACATG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCGTTCACGGTCCTGGCACCTGCTCACTGTTTCCTGTACAACATG  649

seq1  TCATTTGATCCCCATAACAACCTCACAAGGAAAGAATAGCTCGCCTCACT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGATCCCCATAACAACCTCACAAGGAAAGAATAGCTCGCCTCACT  699

seq1  CCGCAGACAAGGGCACCGAGGCTTAGGGAAATCACATCATTTCTTCAAGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCAGACAAGGGCACCGAGGCTTAGGGAAATCACATCATTTCTTCAAGA  749

seq1  TTGGGCAGAGATTATGAATTGGGGACAGAGAGTTGGACTCCAGTCTCAGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCAGAGATTATGAATTGGGGACAGAGAGTTGGACTCCAGTCTCAGG  799

seq1  GGACTCTAAGTTCCCACTTCGATCCCTATGGAGCACCGTGGCACATATAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCTAAGTTCCCACTTCGATCCCTATGGAGCACCGTGGCACATATAA  849

seq1  AGAAACGCTTGAAAACCAAGCATCTATTGTAATCCTTTGTGACTACCACA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACGCTTGAAAACCAAGCATCTATTGTAATCCTTTGTGACTACCACA  899

seq1  TATCTTCACACCCCCCTCTCAGCTAACCTCCCTTAGCTAACTAGTCTCTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCACACCCCCCTCTCAGCTAACCTCCCTTAGCTAACTAGTCTCTG  949

seq1  AACTAGTTATCTCGTGTTACAACCAAGCAGCCAAAGCTCAGAAAGGGAAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGTTATCTCGTGTTACAACCAAGCAGCCAAAGCTCAGAAAGGGAAC  999

seq1  CTCATCCAGTGTGGATTTTGGTCTCTGCTGGAAAACACAGAATTC  1042
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCCAGTGTGGATTTTGGTCTCTGCTGGAAAACACAGAATTC  1044