BAC Information

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BAC

Clone NameB6Ng01-167H12
Chromosome15 (Build37)
Map Location 21,982,748 - 21,983,741
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh12, LOC100040351
Downstream geneEG545091, Cdh18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167H12.bB6Ng01-167H12.g
ACCDH958958DH958959
length1,1631,017
definitionDH958958|Mus musculus domesticus DNA, BAC clone: B6Ng01-167H12, 5' end.DH958959|Mus musculus domesticus DNA, BAC clone: B6Ng01-167H12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctactcagccattaaaaacaagagcatcatgaatttcaaacacag
gcagatggaactagaaagtatcctgagttaacccagacccaaaaggacat
gcatggtgtgttctcactgataagtgcatattaaccatgaagtacaggat
gtaatcaacaaacccaaagaagccaaataacaaggaaagacttttacagg
aggatgtttgaatctttctaagatggagaagaaaaattgatataagaagt
ttatagaaggagggaactggatgaaagaggggttgagtagggtggcagga
cacaggagaggagagaaggggagagagaaggattatcagatttggaaggg
atcaatctctaagttgtgccagaggcctgggttggagagaggcccaagag
agtaaatggggcaactctacctgagactcctagcagtggaagatatcgat
cctgatgtttgtaaacaagcaggactcccagtagtgggatgaagacagta
acccatccacaaagccttctatctgtaatgtgtcctgcctacaagatgtt
taggtacagatacagactcaaggaatggtcatccaatgactgcaccaaat
tgagacccatcctatgggcaagaaccaatccctgacaatattgatgatac
tctgttatgcttacatacaagaacctagcataactgtcctcttagaggct
ccacccagcagccaatggaaagagattcagagactcacacccaaacatta
gatggagttcaggaatcttacaaaagaatggggatgattaagggatcaga
cctgattccatagaaagacagagtcaactaacttgtaccattgtgggctc
ccagagactgaatcatagaccaaaaagagaacatagtctggacctagttc
ccctacacatatgttagcagatgagctgctggtcttcatgcaggtcatga
aaaactgaagcagagacagtccctgagcctgttgcctgcctgtgaatccc
atgacctaaacggacagcccatctagcctcagtggaaagatcactagtcc
caaagctacatgatacatgaggaaggcctataaggggatggtacacccag
aggggccatcctagagaaggactgtatgttgagaactcaggaaggagtaa
cggagaagagaag
gaattccatagcactctgtcttctgcttgtcatatatcaaaccactgtta
gttcaacatgacatagacactctggaatttaaaaaggcaatttattaaga
acttcacacctaaaagtcaaataattggccactaattttttttcctacca
tgactgttaccaaatgactaaaaaatggaggaacaggacagaaaggaggt
gagagatgcttggaagccctcataaccatagccgtggaaggccaagtgaa
ggagagctggcgacgctggacaagttgtcataatgaggaatgtacaaaga
taggtaaactaattaaagcccaaccactgtaattaatcacccaaactgag
aagtggtacaggaataagagcctcttaaaaaatttcacgtcaatccttgt
cacagttttgaaaatataatgcataaaaccagcctgaatgttcaacctta
ggtgtaggaacctttactgaagagttctaaagagatggaataagctttct
ttttattgaaaatagattcttttctcactcttctctcatagaatacctcc
caaccatagtttatcctacccatccccaagctcctcacttccaacccact
ccccttccatttctcttcagaaaagaacagacttccaagagaccaccaca
gaatagaacaacaacaacacaatgatataataagacaaagcaaacccgct
cttactgaggctagacagggcacccaaaagaaggaaaatattcccaaggg
cagacaaaatagagatacacttgatctcactgttaggagttccacaaaaa
tcccaagctaacaaccataacaaataagaggagggccttctggagaagcc
tgcctgccccatgcttgctgctattgtctctgcaagccaatgtgagccat
gcttagttgattcagtgggccatgttctcatgggtgtctccattctctca
gactcagatacctttttctctgtctccttctatggggtttcctatctgca
agtggagggacctgatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_21982748_21983741
seq2: B6Ng01-167H12.g_67_1058

seq1  GAATTCCATAGCACTCTGTCTTCTGCTTGTCATATATCAAACCACTGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAGCACTCTGTCTTCTGCTTGTCATATATCAAACCACTGTTA  50

seq1  GTTCAACATGACATAGACACTCTGGAATTTAAAAAGGCAATTTATTAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAACATGACATAGACACTCTGGAATTTAAAAAGGCAATTTATTAAGA  100

seq1  ACTTCACACCTAAAAGTCAAATAATTGGCCACTAATTTTTTTTCCTACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCACACCTAAAAGTCAAATAATTGGCCACTAATTTTTTTTCCTACCA  150

seq1  TGACTGTTACCAAATGACTAAAAAATGGAGGAACAGGACAGAAAGGAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTTACCAAATGACTAAAAAATGGAGGAACAGGACAGAAAGGAGGT  200

seq1  GAGAGATGCTTGGAAGCCCTCATAACCATAGCCGTGGAAGGCCAAGTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATGCTTGGAAGCCCTCATAACCATAGCCGTGGAAGGCCAAGTGAA  250

seq1  GGAGAGCTGGCGACGCTGGACAAGTTGTCATAATGAGGAATGTACAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGCTGGCGACGCTGGACAAGTTGTCATAATGAGGAATGTACAAAGA  300

seq1  TAGGTAAACTAATTAAAGCCCAACCACTGTAATTAATCACCCAAACTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAAACTAATTAAAGCCCAACCACTGTAATTAATCACCCAAACTGAG  350

seq1  AAGTGGTACAGGAATAAGAGCCTCTTAAAAAATTTCACGTCAATCCTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGTACAGGAATAAGAGCCTCTTAAAAAATTTCACGTCAATCCTTGT  400

seq1  CACAGTTTTGAAAATATAATGCATAAAACCAGCCTGAATGTTCAACCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTTTGAAAATATAATGCATAAAACCAGCCTGAATGTTCAACCTTA  450

seq1  GGTGTAGGAACCTTTACTGAAGAGTTCTAAAGAGATGGAATAAGCTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAGGAACCTTTACTGAAGAGTTCTAAAGAGATGGAATAAGCTTTCT  500

seq1  TTTTATTGAAAATAGATTCTTTTCTCACTCTTCTCTCATAGAATACCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTGAAAATAGATTCTTTTCTCACTCTTCTCTCATAGAATACCTCC  550

seq1  CAACCATAGTTTATCCTACCCATCCCCAAGCTCCTCACTTCCAACCCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCATAGTTTATCCTACCCATCCCCAAGCTCCTCACTTCCAACCCACT  600

seq1  CCCCTTCCATTTCTCTTCAGAAAAGAACAGACTTCCAAGAGACCACCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTCCATTTCTCTTCAGAAAAGAACAGACTTCCAAGAGACCACCACA  650

seq1  GAATAGAACAACAACAACACAATGATATAATAAGACAAAGCAAACCCGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGAACAACAACAACACAATGATATAATAAGACAAAGCAAACCCGCT  700

seq1  CTTACTGAGGCTAGACAGGGCACCCAAAAGAAGGAAAATATTCCCAAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTGAGGCTAGACAGGGCACCCAAAAGAAGGAAAATATTCCCAAGGG  750

seq1  CAGACAAAATAGAGATACACTTGATCTCACTGTTAGGAGTTCCACAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAAAATAGAGATACACTTGATCTCACTGTTAGGAGTTCCACAAAAA  800

seq1  TCCCAAGCTAACAACCATAACAAATAAGAGGAGGGCCTTCTGGAGAAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGCTAACAACCATAACAAATAAGAGGAGGGCCTTCTGGAGAAGCC  850

seq1  TGCCTGCCCCATGCTTGCTGCTATTGTCTCTGCAAGCCAATGTGAGCCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCCCCATGCTTGCTGCTATTGTCTCTGCAAGCCAATGTGAGCCAT  900

seq1  GCTTAGTTGATTCAGTGGGCCATGTTCTCATGGGTGTCCTCCATTCTCTC  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GCTTAGTTGATTCAGTGGGCCATGTTCTCATGGGTGT-CTCCATTCTCTC  949

seq1  AGACTCAGATAACCTTTTTCTCTGTCTCCTTCTATGGGGTTTCC  994
      |||||||||| |||||||||||||||||||||||||||||||||
seq2  AGACTCAGAT-ACCTTTTTCTCTGTCTCCTTCTATGGGGTTTCC  992