BAC Information

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BAC

Clone NameB6Ng01-168A01
Chromosome15 (Build37)
Map Location 57,723,996 - 57,897,909
singlet/doubletdoublet
Overlap geneWdr67, BC030396, 9130401M01Rik, Zhx1
Upstream geneLOC100040067, LOC100039984, BC026439, Zhx2, Derl1
Downstream geneAtad2, LOC665244, 2410187C16Rik, Fbxo32, 8230402K04Rik, Anxa13, LOC100040231, D15Ertd621e, EG631797, Tmem65, EG546638, Trmt12, Rnf139, Tatdn1, Ndufb9, Mtss1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168A01.bB6Ng01-168A01.g
ACCDH959355DH959356
length1,083998
definitionDH959355|Mus musculus domesticus DNA, BAC clone: B6Ng01-168A01, 5' end.DH959356|Mus musculus domesticus DNA, BAC clone: B6Ng01-168A01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,896,817 - 57,897,909)(57,723,996 - 57,725,006)
sequence
gaattctctgtaatgagttcacctttggtcacggctttcagacatctcag
cttttgtcatatccatttctgcttgtagtcactttaatactggactgctt
ttggttttgacattttcctgaggtttatcttttaggtaatgattctaagt
gccagtaatattttaaaagcatttacatggctacacatttgggttgtcaa
gttcctaattaaatatttttaagaattaggctatgcaaatgtttacattt
ttaaatgtgaaaatgcctttagaatatgaatgccattttacctttttgca
tgtctgtctgtctgtctctcttgtataaggacagtgggtactttttgttt
gaattggatcccagtgtttgtatataagtattttgtgatcttactagatt
tgtaatcatgagaaactaaacatttccagctagccgaatagagctctgat
tgagaggtgagaatgtgagactaaatggagcagggtcccaagaattccca
gggagttataggagtgaagattcctagggattcttagtgtatatattttt
gcttcttaagaacagttttatttagttgatgctagatagaaactaacatg
aacctaacaaactataacatcttacaacataatttttatttgacccatat
ttggtgtaaaatatttattttattcatatacaatcttaccaaaataacat
attttgtggctaaataggccatagtactattatctgttaatcatgtaatt
tgaaatacaagacttggggattcaatacagctacaattctgtctaattta
taaacattttaaataacatttgacattttcattaatagtcatacaatcca
gtaactttaaacattttaaaatgttttattttatgaatatgggtgtttat
cttttatgtatgtttgtgccatgtgtgcatctggtgcatatggaggccag
aaaagggcatttgaccctggacagagtacagatgtttgggagtcttcatg
tgggtttgggatcaaatgttggttctttagtaagcatcagtgcttaactg
ctgagccatctctccatccaaatctactaattt
gacaagctaggcagcgatcacaagagaaacttccccttccggtggccgcg
gtccacgtgaccagaagtgtcccggcggcttaaagggccagtgccgtttt
tgcagctcagtaccgggactcgacgtcctggggtggggccaagcaggaga
ggcggggcgacgacggcaaggctagtaggaaacagtggttacccagagca
acggccagtcttgcaaaccaatggggaagctacatgccctagttctcccc
ggagttgtaatcggagtagtgcctcttgaagagtatttatttaaagggaa
aggaagagatagcgcatatagttcctcatttagtcacagcttcaggcaaa
tttttagacactggggatgcagctgcggctgtgagcacggtagcggtacc
tgaactttgcagtctcagggtagacagaaaagcaaatgagttatgaagaa
gaatttcagaggatacgggaaaagattaggatgatgggggggctagagtg
gcagcggaggactgggaaatcttgagacgcatttgagaccgcatttataa
ttggacatgatctggttcattggggggctttaaattagaaatgaagatgg
ttgttttaaacaaatggtggaaagataccgatttcactagaacttttatt
cagttgctggtttttgttgttgttgttttggtttggttttgtttttttga
aaatatggtttaggatcagtaaaactttccgtaaagaacataggtgtaaa
ctgacctgtagtaaactaagtatctgaacttactgcaatcaaagagattg
ctcaccaagaactctggacccattctctaaacaaatcaaaatcatcatta
ttggatggtgggagggagaggaatttcggccaacttgtagatgcagtgct
tgtaaacacagagctgatgtgaacatatttccatcgagtctggactatta
gaaaagaatcgactcggtgtcgcggatgggaaaaatattcctcaaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_57896817_57897909
seq2: B6Ng01-168A01.b_46_1128 (reverse)

seq1  AAATTAGTTAGATTTGGGATGGAGAGATGGCTCAGCAGTTAAAAGCACTG  50
      ||||||| ||||||| ||||||||||||||||||||||||  ||||||||
seq2  AAATTAG-TAGATTT-GGATGGAGAGATGGCTCAGCAGTT--AAGCACTG  46

seq1  ATTGCTCTACTAAAGAACCAACATTTGATTCCCAAACCCACATGAGGACT  100
      | |||| ||||||||||||||||||||| |||||||||||||||| ||||
seq2  A-TGCT-TACTAAAGAACCAACATTTGA-TCCCAAACCCACATGAAGACT  93

seq1  CCCAAACATCTGTACTCCTGTTCCAGGGTCAAATGCCCTTTTCTGGCCTC  150
      |||||||||||||||| ||| |||||||||||||||||||||||||||||
seq2  CCCAAACATCTGTACT-CTG-TCCAGGGTCAAATGCCCTTTTCTGGCCTC  141

seq1  CATATGCACCAGATGCACACATGGCACAAAACATACATAAAAGATAAACA  200
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CATATGCACCAGATGCACACATGGCAC-AAACATACATAAAAGATAAACA  190

seq1  CCCATATTCATAAAATAAAACATTTTAAAATGTTTAAAGTTACTGGATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATATTCATAAAATAAAACATTTTAAAATGTTTAAAGTTACTGGATTG  240

seq1  TATGACTATTAATGAAAATGTCAAATGTTATTTAAAATGTTTATAAATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACTATTAATGAAAATGTCAAATGTTATTTAAAATGTTTATAAATTA  290

seq1  GACAGAATTGTAGCTGTATTGAATCCCCAAGTCTTGTATTTCAAATTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAATTGTAGCTGTATTGAATCCCCAAGTCTTGTATTTCAAATTACA  340

seq1  TGATTAACAGATAATAGTACTATGGCCTATTTAGCCACAAAATATGTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAACAGATAATAGTACTATGGCCTATTTAGCCACAAAATATGTTAT  390

seq1  TTTGGTAAGATTGTATATGAATAAAATAAATATTTTACACCAAATATGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTAAGATTGTATATGAATAAAATAAATATTTTACACCAAATATGGG  440

seq1  TCAAATAAAAATTATGTTGTAAGATGTTATAGTTTGTTAGGTTCATGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATAAAAATTATGTTGTAAGATGTTATAGTTTGTTAGGTTCATGTTA  490

seq1  GTTTCTATCTAGCATCAACTAAATAAAACTGTTCTTAAGAAGCAAAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTATCTAGCATCAACTAAATAAAACTGTTCTTAAGAAGCAAAAATA  540

seq1  TATACACTAAGAATCCCTAGGAATCTTCACTCCTATAACTCCCTGGGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACTAAGAATCCCTAGGAATCTTCACTCCTATAACTCCCTGGGAAT  590

seq1  TCTTGGGACCCTGCTCCATTTAGTCTCACATTCTCACCTCTCAATCAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGACCCTGCTCCATTTAGTCTCACATTCTCACCTCTCAATCAGAG  640

seq1  CTCTATTCGGCTAGCTGGAAATGTTTAGTTTCTCATGATTACAAATCTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATTCGGCTAGCTGGAAATGTTTAGTTTCTCATGATTACAAATCTAG  690

seq1  TAAGATCACAAAATACTTATATACAAACACTGGGATCCAATTCAAACAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATCACAAAATACTTATATACAAACACTGGGATCCAATTCAAACAAA  740

seq1  AAGTACCCACTGTCCTTATACAAGAGAGACAGACAGACAGACATGCAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACCCACTGTCCTTATACAAGAGAGACAGACAGACAGACATGCAAAA  790

seq1  AGGTAAAATGGCATTCATATTCTAAAGGCATTTTCACATTTAAAAATGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAAATGGCATTCATATTCTAAAGGCATTTTCACATTTAAAAATGTA  840

seq1  AACATTTGCATAGCCTAATTCTTAAAAATATTTAATTAGGAACTTGACAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTGCATAGCCTAATTCTTAAAAATATTTAATTAGGAACTTGACAA  890

seq1  CCCAAATGTGTAGCCATGTAAATGCTTTTAAAATATTACTGGCACTTAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAATGTGTAGCCATGTAAATGCTTTTAAAATATTACTGGCACTTAGA  940

seq1  ATCATTACCTAAAAGATAAACCTCAGGAAAATGTCAAAACCAAAAGCAGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTACCTAAAAGATAAACCTCAGGAAAATGTCAAAACCAAAAGCAGT  990

seq1  CCAGTATTAAAGTGACTACAAGCAGAAATGGATATGACAAAAGCTGAGAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTATTAAAGTGACTACAAGCAGAAATGGATATGACAAAAGCTGAGAT  1040

seq1  GTCTGAAAGCCGTGACCAAAGGTGAACTCATTACAGAGAATTC  1093
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAAAGCCGTGACCAAAGGTGAACTCATTACAGAGAATTC  1083

seq1: chr15_57723996_57725006
seq2: B6Ng01-168A01.g_76_1073

seq1  GACAAGCTAGGCAGCGATCACAAGAGAAACTTCCCCTTCCGGTGGCCGCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGCTAGGCAGCGATCACAAGAGAAACTTCCCCTTCCGGTGGCCGCG  50

seq1  GTCCACGTGACCAGAAGTGTCCCGGCGGCTTAAAGGGCCAGTGCCGTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACGTGACCAGAAGTGTCCCGGCGGCTTAAAGGGCCAGTGCCGTTTT  100

seq1  TGCAGCTCAGTACCGGGACTCGACGTCCTGGGGTGGGGCCAAGCAGGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTCAGTACCGGGACTCGACGTCCTGGGGTGGGGCCAAGCAGGAGA  150

seq1  GGCGGGGCGACGACGGCAAGGCTAGTAGGAAACAGTGGTTACCCAGAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGGGCGACGACGGCAAGGCTAGTAGGAAACAGTGGTTACCCAGAGCA  200

seq1  ACGGCCAGTCTTGCAAACCAATGGGGAAGCTACATGCCCTAGTTCTCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCCAGTCTTGCAAACCAATGGGGAAGCTACATGCCCTAGTTCTCCCC  250

seq1  GGAGTTGTAATCGGAGTAGTGCCTCTTGAAGAGTATTTATTTAAAGGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTGTAATCGGAGTAGTGCCTCTTGAAGAGTATTTATTTAAAGGGAA  300

seq1  AGGAAGAGATAGCGCATATAGTTCCTCATTTAGTCACAGCTTCAGGCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAGATAGCGCATATAGTTCCTCATTTAGTCACAGCTTCAGGCAAA  350

seq1  TTTTTAGACACTGGGGATGCAGCTGCGGCTGTGAGCACGGTAGCGGTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGACACTGGGGATGCAGCTGCGGCTGTGAGCACGGTAGCGGTACC  400

seq1  TGAACTTTGCAGTCTCAGGGTAGACAGAAAAGCAAATGAGTTATGAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTTGCAGTCTCAGGGTAGACAGAAAAGCAAATGAGTTATGAAGAA  450

seq1  GAATTTCAGAGGATACGGGAAAAGATTAGGATGATGGGGGGGCTAGAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTCAGAGGATACGGGAAAAGATTAGGATGATGGGGGGGCTAGAGTG  500

seq1  GCAGCGGAGGACTGGGAAATCTTGAGACGCATTTGAGACCGCATTTATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCGGAGGACTGGGAAATCTTGAGACGCATTTGAGACCGCATTTATAA  550

seq1  TTGGACATGATCTGGTTCATTGGGGGGCTTTAAATTAGAAATGAAGATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACATGATCTGGTTCATTGGGGGGCTTTAAATTAGAAATGAAGATGG  600

seq1  TTGTTTTAAACAAATGGTGGAAAGATACCGATTTCACTAGAACTTTTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTAAACAAATGGTGGAAAGATACCGATTTCACTAGAACTTTTATT  650

seq1  CAGTTGCTGGTTTTTGTTGTTGTTGTTTTGGTTTGGTTTTGTTTTTTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGCTGGTTTTTGTTGTTGTTGTTTTGGTTTGGTTTTGTTTTTTTGA  700

seq1  AAATATGGTTTAGGATCAGTAAAACTTTCCGTAAAGAACATAGGTGTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGGTTTAGGATCAGTAAAACTTTCCGTAAAGAACATAGGTGTAAA  750

seq1  CTGACCTGTAGTAAACTAAGTATCTGAACTTACTGCAATCAAAGAGATTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTGTAGTAAACTAAGTATCTGAACTTACTGCAATCAAAGAGATTG  800

seq1  CTCACCAAAGAACCCTGGACCCATTTCTCTAAACAAAATCCAAAATCATC  850
      |||||| |||||| ||||||||| |||||||||||||   ||||||||||
seq2  CTCACC-AAGAACTCTGGACCCA-TTCTCTAAACAAA--TCAAAATCATC  846

seq1  ATTATTGGATGGT-GGAGGGAGAGGAACTGTCGGCCAAACTGGAAGAGGC  899
      ||||||||||||| ||||||||||||| | |||||| |||| | ||| ||
seq2  ATTATTGGATGGTGGGAGGGAGAGGAA-TTTCGGCC-AACTTGTAGATGC  894

seq1  AGTGCGTTGTAAACACAGAGCTGAGGTGTAACATAATTACCATCAGGTCT  949
      ||||| |||||||||||||||||| ||| ||||| ||| |||||  ||||
seq2  AGTGC-TTGTAAACACAGAGCTGATGTG-AACAT-ATTTCCATCGAGTCT  941

seq1  GGACAATAAGAAAAGAAACAGACTCGGTGTTCTCAGATCGGGAAAAAAAA  999
      |||| || ||||||||| | ||||||||| || | ||| ||   ||||| 
seq2  GGACTATTAGAAAAGAATC-GACTCGGTG-TCGCGGATGGG---AAAAAT  986

seq1  ATTCCTCAAACT  1011
      |||||||||| |
seq2  ATTCCTCAAAAT  998