BAC Information

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BAC

Clone NameB6Ng01-168F22
Chromosome15 (Build37)
Map Location 20,384,291 - 20,385,175
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666875, LOC621884, LOC100040265
Downstream geneAcot10, LOC100040302, Cdh12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168F22.g
ACCDH959626
length893
definitionDH959626|Mus musculus domesticus DNA, BAC clone: B6Ng01-168F22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccctgctccatgtggagctggagccatgggttccctccatatgta
ctacttggttggtggcttagtccctgggactgcggggctatggattgggt
gatacaggcacttctaatggcatgaaaaccaatcagagatcttgcattca
ttggtggtcccatagagtataatagagaaccaaattcactggtgtccaga
aatatagatttgtacctaccataggtttatactagtttgtggtattgctg
ttttaaaaataatcatatatttctagaaatataaaataattattttggtg
cataatattgcatattgatacatatttgttactggactttgcttttaact
tctaatttatagcataattgttttacttaaacagtgtttatattgaagtc
tatgttgttgtatcctggcagcaactgcctgtattttatgtttcttgcct
tttgtgagtccctcaaaaggaccatgcactgctgacttgacgtacactat
ctagttttttctaactatattttacaagttttgcacaacagtgatattcc
ctaaaggttcatttctcaaaatgcatctttgtccttaagcatgtctgtat
atctacaatgaaatatacttctggggctttgtgaatcaatatttccatga
agttttgccatttctgcaagggatgtgattgctcgcatattttaaagtaa
gatttaactccattccctctcttccctaatacaggcagtgggacatgatg
taaagagtgaagcatttgcttttggcacgcctgggatatctgtcacttaa
ttagactgaaaagctgacataaaattctgtaatcagccatacttactgga
aaattttagttttcaaaaactttttcagcatatgtgtatgctg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_20384291_20385175
seq2: B6Ng01-168F22.g_83_958

seq1  TGGAGCTGGAGCCATGGGTTCCCTCCATATGTACTACTTGGTTGGTGGTT  50
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGGAGCTGGAGCCATGGGTTCCCTCCATATGTACTACTTGGTTGGTGGCT  50

seq1  TAGTCCCTGGGAGTGCAGGGCTATGGATTGGTTGATACAGGCACTTCTAA  100
      |||||||||||| ||| |||||||||||||| ||||||||||||||||||
seq2  TAGTCCCTGGGACTGCGGGGCTATGGATTGGGTGATACAGGCACTTCTAA  100

seq1  TGGCATGAAAACCAATCAGAGATCTTGCATTCATTGGTGGTCCCATAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATGAAAACCAATCAGAGATCTTGCATTCATTGGTGGTCCCATAGAG  150

seq1  TATAATAGAGAACCAAATTCACTGGTGTCCAGAAATATAGATTTGTAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TATAATAGAGAACCAAATTCACTGGTGTCCAGAAATATAGATTTGTACCT  200

seq1  ACCATAGGTTTATACTAGTTTGTGGTATTGCTGTTTTAAAAATAATCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATAGGTTTATACTAGTTTGTGGTATTGCTGTTTTAAAAATAATCATA  250

seq1  TATTTCTAGAAATATAAAATAATTATTTTGGTGCATAATATTGTATATTG  300
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TATTTCTAGAAATATAAAATAATTATTTTGGTGCATAATATTGCATATTG  300

seq1  ATACATATTTGTTACTGGACTTTGCTTTTAACTTCTAATTTATAGCATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATATTTGTTACTGGACTTTGCTTTTAACTTCTAATTTATAGCATAA  350

seq1  TTGTTTTACTTAAACAGTGTTTATATTGAAGTCTATGTTGTTGTATCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTACTTAAACAGTGTTTATATTGAAGTCTATGTTGTTGTATCCTG  400

seq1  GCAGCAACTGCCTGTATTTTATGTTTCTTGCCTTTTGTGAGTCCCTCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAACTGCCTGTATTTTATGTTTCTTGCCTTTTGTGAGTCCCTCAAA  450

seq1  AGGACCATGCACTGCTGACTTGACGTACACTATCTAGTTTTTTCTAAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGGACCATGCACTGCTGACTTGACGTACACTATCTAGTTTTTTCTAACTA  500

seq1  TATTTTACAAGTTTTGCACAACAGTGATATTCCCTAAAGGTTTATTTCTC  550
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TATTTTACAAGTTTTGCACAACAGTGATATTCCCTAAAGGTTCATTTCTC  550

seq1  AGAATGCATCTTTGTCCTTAAGCATGTCTGTATATCTACAATGAAATATT  600
      | ||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAAATGCATCTTTGTCCTTAAGCATGTCTGTATATCTACAATGAAATATA  600

seq1  CTTCTGGGGCTTTGTGAATCAATATTTCCATGAAGTTTTGCCATTTCTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGGGCTTTGTGAATCAATATTTCCATGAAGTTTTGCCATTTCTGC  650

seq1  AAGGGATGTGATTGCTCGCAGATTTTAAAGTAAGATTTAACTCCATTCCC  700
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAGGGATGTGATTGCTCGCATATTTTAAAGTAAGATTTAACTCCATTCCC  700

seq1  TCTCTTCCTTAATTACAGGCAGTGGGACATGAGGTAAAGAGTGAAGCATA  750
      |||||||| ||| ||||||||||||||||||| |||||||||||||||| 
seq2  TCTCTTCCCTAA-TACAGGCAGTGGGACATGATGTAAAGAGTGAAGCATT  749

seq1  AGCTTTTGGCAGGGCTGGGATATATGTTAGTTAAGCGAGACTGAGAAGGC  800
       |||||||||| | ||||||||| ||| | ||||   ||||||| || ||
seq2  TGCTTTTGGCACGCCTGGGATATCTGTCACTTAA-TTAGACTGA-AAAGC  797

seq1  TGAGATAAAATTCTGTAATCAGCCATAGCTTCACAGGAAGAAATTTTAGT  850
      ||| ||||||||||||||||||||||| ||| || |||  ||||||||||
seq2  TGACATAAAATTCTGTAATCAGCCATA-CTT-ACTGGA--AAATTTTAGT  843

seq1  TTTCATAATACTTTTTCAGCATATGTGTTATGCTG  885
      ||||| || |||||||||||||||||| |||||||
seq2  TTTCA-AAAACTTTTTCAGCATATGTG-TATGCTG  876